RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 JPH2Q9BR39 696 aaPredicted RBP9.42□□□□□ -0.9
PCM1-212ENST00000519253 LZTS2Q9BRK4 669 aa9.42□□□□□ -0.9
PCM1-212ENST00000519253 TRIM7Q9C029 511 aa9.42□□□□□ -0.9
PCM1-212ENST00000519253 MCM9Q9NXL9 1143 aa9.42□□□□□ -0.9
PCM1-212ENST00000519253 LRWD1Q9UFC0 647 aa9.42□□□□□ -0.9
PCM1-212ENST00000519253 FBXO2Q9UK22 296 aaPredicted RBP9.42□□□□□ -0.9
PCM1-212ENST00000519253 ODF2LQ9ULJ1 636 aa9.42□□□□□ -0.9
PCM1-212ENST00000519253 MROH7-TTC4A0A0A0MT08 1334 aa9.42□□□□□ -0.9
PCM1-212ENST00000519253 UBN2Q6ZU65 1347 aa9.42□□□□□ -0.9
PCM1-212ENST00000519253 CPDO75976 1380 aa9.42□□□□□ -0.9
PCM1-212ENST00000519253 GNA14O95837 355 aa9.42□□□□□ -0.9
PCM1-212ENST00000519253 RAB17Q9H0T7 212 aa9.42□□□□□ -0.9
PCM1-212ENST00000519253 CALCOCO2Q13137 446 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 ALX1Q15699 326 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 MSL3Q8N5Y2 521 aaKnown RBP9.41□□□□□ -0.9
PCM1-212ENST00000519253 LRRN4CLQ8ND94 238 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 EPB41L5Q9HCM4 733 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 PPLO60437 1756 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 MROH2AA6NES4 1674 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 CDC27P30260 824 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 HOXA7P31268 230 aaPredicted RBP9.41□□□□□ -0.9
PCM1-212ENST00000519253 SETDB1Q15047 1291 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 TAOK1Q7L7X3 1001 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 DZIP3Q86Y13 1208 aaKnown RBP9.41□□□□□ -0.9
PCM1-212ENST00000519253 TBC1D10CQ8IV04 446 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 SLF2Q8IX21 1173 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 FBXL16Q8N461 479 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 STRBPQ96SI9 672 aaKnown RBP9.41□□□□□ -0.9
PCM1-212ENST00000519253 NAP1L4Q99733 375 aaKnown RBP9.41□□□□□ -0.9
PCM1-212ENST00000519253 MTUS1Q9ULD2 1270 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 PIK3C2BO00750 1634 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 H3BQF6 201 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 ARID4AP29374 1257 aaPredicted RBP9.41□□□□□ -0.9
PCM1-212ENST00000519253 CTSWP56202 376 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 ATP11AP98196 1134 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 CYP27A1Q02318 531 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 PEX26Q7Z412 305 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 NLRC4Q9NPP4 1024 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 ARHGEF28Q8N1W1 1705 aaKnown RBP9.41□□□□□ -0.9
PCM1-212ENST00000519253 PSMD14O00487 310 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 SASH3O75995 380 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 PDCLQ13371 301 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 AK8Q96MA6 479 aa9.41□□□□□ -0.9
PCM1-212ENST00000519253 TULP2O00295 520 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 PHKA1P46020 1223 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 FBF1Q8TES7 1133 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 HPCAL4Q9UM19 191 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 TTC26A0AVF1 554 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 POTEJP0CG39 1038 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 PPP1R7Q15435 360 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 PI16Q6UXB8 463 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 CCNI2Q6ZMN8 369 aaPredicted RBP9.4□□□□□ -0.9
PCM1-212ENST00000519253 CYB5R4Q7L1T6 521 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 ANKRD13CQ8N6S4 541 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 PNKPQ96T60 521 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 LY9Q9HBG7 655 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 KCNK3O14649 394 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 MAP2K7O14733 419 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 COBLO75128 1261 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 PTPAQ15257 358 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 HINFPQ9BQA5 517 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 NPHP4O75161 1426 aaPredicted RBP9.4□□□□□ -0.9
PCM1-212ENST00000519253 MAP3K15Q6ZN16 1313 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 BUB1O43683 1085 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 SRGAP2O75044 1071 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 FXR1P51114 621 aaKnown RBP eCLIP9.4□□□□□ -0.93e-6■■■□□ 15.7
PCM1-212ENST00000519253 MAN2A1Q16706 1144 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 KRT12Q99456 494 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 GEMIN8Q9NWZ8 242 aaKnown RBP9.4□□□□□ -0.9
PCM1-212ENST00000519253 PCDHA13Q9Y5I0 950 aa9.4□□□□□ -0.9
PCM1-212ENST00000519253 SMIM23A6NLE4 172 aa9.4□□□□□ -0.91
PCM1-212ENST00000519253 EIF3HO15372 352 aaKnown RBP eCLIP9.4□□□□□ -0.911e-6■■■□□ 14.8
PCM1-212ENST00000519253 RFX5P48382 616 aaPredicted RBP9.4□□□□□ -0.91
PCM1-212ENST00000519253 RPAINQ86UA6 219 aa9.4□□□□□ -0.91
PCM1-212ENST00000519253 CADPS2Q86UW7 1296 aa9.4□□□□□ -0.91
PCM1-212ENST00000519253 ORAI2Q96SN7 254 aa9.4□□□□□ -0.91
PCM1-212ENST00000519253 MMS19Q96T76 1030 aa9.4□□□□□ -0.91
PCM1-212ENST00000519253 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.4□□□□□ -0.91
PCM1-212ENST00000519253 CCDC169A6NNP5 214 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 KIF1CO43896 1103 aaKnown RBP9.39□□□□□ -0.91
PCM1-212ENST00000519253 CCNT1O60563 726 aaKnown RBP9.39□□□□□ -0.91
PCM1-212ENST00000519253 KIF11P52732 1056 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 CCDC6Q16204 474 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 NOA1Q8NC60 698 aaKnown RBP9.39□□□□□ -0.91
PCM1-212ENST00000519253 NKIRAS1Q9NYS0 192 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 A0A1W2PRG0 241 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 OR52Z1P0C646 297 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 ALDH3A1P30838 453 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 IRAK1P51617 712 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 SARNPP82979 210 aaKnown RBP9.39□□□□□ -0.91
PCM1-212ENST00000519253 RASSF7Q02833 373 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 ATG9AQ7Z3C6 839 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 DAAM2Q86T65 1068 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 CNOT10Q9H9A5 744 aaKnown RBP9.39□□□□□ -0.91
PCM1-212ENST00000519253 RIPOR2Q9Y4F9 1068 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 ATP1A1P05023 1023 aaKnown RBP9.39□□□□□ -0.91
PCM1-212ENST00000519253 EIF4A3P38919 411 aaKnown RBP9.39□□□□□ -0.91
PCM1-212ENST00000519253 TXKP42681 527 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 PARP10Q53GL7 1025 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 LMNTD2Q8IXW0 634 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms