RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 AFMP43652 599 aa12.2□□□□□ -0.46
SPIDR-204ENST00000517824 TCP10Q12799 353 aa12.2□□□□□ -0.46
SPIDR-204ENST00000517824 ORC2Q13416 577 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-204ENST00000517824 TMEM266Q2M3C6 531 aa12.2□□□□□ -0.46
SPIDR-204ENST00000517824 DACT2Q5SW24 774 aa12.2□□□□□ -0.46
SPIDR-204ENST00000517824 RTKN2Q8IZC4 609 aa12.2□□□□□ -0.46
SPIDR-204ENST00000517824 DDX4Q9NQI0 724 aaKnown RBP12.2□□□□□ -0.46
SPIDR-204ENST00000517824 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.2□□□□□ -0.46
SPIDR-204ENST00000517824 IFNKQ9P0W0 207 aa12.2□□□□□ -0.46
SPIDR-204ENST00000517824 ESYT2A0FGR8 921 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 PRR29P0C7W0 189 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 PDHBP11177 359 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 UBA7P41226 1012 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 GRIN1Q05586 938 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 IKQ13123 557 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-204ENST00000517824 NOLC1Q14978 699 aaKnown RBP eCLIP12.19□□□□□ -0.46
SPIDR-204ENST00000517824 NPY5RQ15761 445 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 INF2Q27J81 1249 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 CFAP100Q494V2 611 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 CERKLQ49MI3 558 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-204ENST00000517824 EARS2Q5JPH6 523 aaKnown RBP12.19□□□□□ -0.46
SPIDR-204ENST00000517824 DPY19L2Q6NUT2 758 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 TMC6Q7Z403 805 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 FILIP1Q7Z7B0 1213 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 NEK8Q86SG6 692 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 ANKRD20A12PQ8NF67 263 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 RASGRP4Q8TDF6 673 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 SHISA4Q96DD7 197 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 PIGSQ96S52 555 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 MRIQ9BWK5 157 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 RAB34Q9BZG1 259 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 ZMYND12Q9H0C1 365 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 GLT8D2Q9H1C3 349 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 TAOK3Q9H2K8 898 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 PI4KBQ9UBF8 816 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 PCDHA6Q9UN73 950 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 PCDHA8Q9Y5H6 950 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 LOXHD1Q8IVV2 1947 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 FER1L6Q2WGJ9 1857 aa12.19□□□□□ -0.46
SPIDR-204ENST00000517824 GTPBP6O43824 516 aaPredicted RBP12.18□□□□□ -0.46
SPIDR-204ENST00000517824 MARCH6O60337 910 aa12.18□□□□□ -0.46
SPIDR-204ENST00000517824 DDNO94850 711 aaPredicted RBP12.18□□□□□ -0.46
SPIDR-204ENST00000517824 OR52Z1P0C646 297 aa12.18□□□□□ -0.46
SPIDR-204ENST00000517824 POTEIP0CG38 1075 aa12.18□□□□□ -0.46
SPIDR-204ENST00000517824 POTEJP0CG39 1038 aa12.18□□□□□ -0.46
SPIDR-204ENST00000517824 HSPA1AP0DMV8 641 aaKnown RBP12.18□□□□□ -0.46
SPIDR-204ENST00000517824 HSPA1BP0DMV9 641 aaKnown RBP12.18□□□□□ -0.46
SPIDR-204ENST00000517824 SFPQP23246 707 aaKnown RBP eCLIP12.18□□□□□ -0.46
SPIDR-204ENST00000517824 SHMT1P34896 483 aa12.18□□□□□ -0.46
SPIDR-204ENST00000517824 PRPHP41219 470 aa12.18□□□□□ -0.46
SPIDR-204ENST00000517824 FANCCQ00597 558 aa12.18□□□□□ -0.46
SPIDR-204ENST00000517824 GABPAQ06546 454 aa12.18□□□□□ -0.46
SPIDR-204ENST00000517824 STIM1Q13586 685 aa12.18□□□□□ -0.46
SPIDR-204ENST00000517824 LETM2Q2VYF4 491 aa12.18□□□□□ -0.46
SPIDR-204ENST00000517824 CT47A1Q5JQC4 288 aaPredicted RBP12.18□□□□□ -0.46
SPIDR-204ENST00000517824 LARGE2Q8N3Y3 721 aa12.18□□□□□ -0.46
SPIDR-204ENST00000517824 DCAF4Q8WV16 495 aa12.18□□□□□ -0.46
SPIDR-204ENST00000517824 C7orf43Q8WVR3 580 aa12.18□□□□□ -0.46
SPIDR-204ENST00000517824 EPSTI1Q96J88 318 aa12.18□□□□□ -0.46
SPIDR-204ENST00000517824 GSDMAQ96QA5 445 aa12.18□□□□□ -0.46
SPIDR-204ENST00000517824 NAP1L4Q99733 375 aaKnown RBP12.18□□□□□ -0.46
SPIDR-204ENST00000517824 XPO4Q9C0E2 1151 aaKnown RBP12.18□□□□□ -0.46
SPIDR-204ENST00000517824 MAGEF1Q9HAY2 307 aa12.18□□□□□ -0.46
SPIDR-204ENST00000517824 R3HCC1Q9Y3T6 440 aaKnown RBP12.18□□□□□ -0.46
SPIDR-204ENST00000517824 CYTH3O43739 400 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 CCNT1O60563 726 aaKnown RBP12.17□□□□□ -0.46
SPIDR-204ENST00000517824 ENTPD3O75355 529 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 UBASH3AP57075 661 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 ICA1Q05084 483 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 ZNF543Q08ER8 600 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 MORC3Q14149 939 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 NOM1Q5C9Z4 860 aaKnown RBP12.17□□□□□ -0.46
SPIDR-204ENST00000517824 RBM26Q5T8P6 1007 aaKnown RBP12.17□□□□□ -0.46
SPIDR-204ENST00000517824 RRAGBQ5VZM2 374 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 APOBEC3HQ6NTF7 200 aaKnown RBP12.17□□□□□ -0.46
SPIDR-204ENST00000517824 TMEM179Q6ZVK1 233 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 NIM1KQ8IY84 436 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 GRAMD1CQ8IYS0 662 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 TNS4Q8IZW8 715 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 OGFOD1Q8N543 542 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 CUL5Q93034 780 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 PAGE5Q96GU1 130 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 CDK5RAP3Q96JB5 506 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 AK8Q96MA6 479 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 IDI2Q9BXS1 227 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 UBA5Q9GZZ9 404 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 KANSL2Q9H9L4 492 aa12.17□□□□□ -0.46
SPIDR-204ENST00000517824 IGKV6D-41A0A0C4DH26 115 aa12.16□□□□□ -0.46
SPIDR-204ENST00000517824 PNMA6FA0A0J9YX94 578 aa12.16□□□□□ -0.46
SPIDR-204ENST00000517824 FOXN1O15353 648 aa12.16□□□□□ -0.46
SPIDR-204ENST00000517824 CCP110O43303 1012 aa12.16□□□□□ -0.46
SPIDR-204ENST00000517824 ERCC5P28715 1186 aaPredicted RBP12.16□□□□□ -0.46
SPIDR-204ENST00000517824 SLC1A4P43007 532 aa12.16□□□□□ -0.46
SPIDR-204ENST00000517824 TNNI2P48788 182 aa12.16□□□□□ -0.46
SPIDR-204ENST00000517824 MRPL12P52815 198 aaKnown RBP12.16□□□□□ -0.46
SPIDR-204ENST00000517824 CACNB3P54284 484 aa12.16□□□□□ -0.46
SPIDR-204ENST00000517824 NFIAQ12857 509 aa12.16□□□□□ -0.46
SPIDR-204ENST00000517824 ABCB5Q2M3G0 1257 aa12.16□□□□□ -0.46
SPIDR-204ENST00000517824 FILIP1LQ4L180 1135 aa12.16□□□□□ -0.46
SPIDR-204ENST00000517824 NT5DC1Q5TFE4 455 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms