RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 NELL2Q99435 816 aa1.41□□□□□ -2.18
RNU6-557P-201ENST00000516842 CXXC1Q9P0U4 656 aaPredicted RBP1.41□□□□□ -2.18
RNU6-557P-201ENST00000516842 IMPACTQ9P2X3 320 aa1.41□□□□□ -2.18
RNU6-557P-201ENST00000516842 CEP131Q9UPN4 1083 aa1.41□□□□□ -2.18
RNU6-557P-201ENST00000516842 RBM47A0AV96 593 aaKnown RBP1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 ERVV-2B6SEH9 535 aa1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 F8W031 263 aaPredicted RBP1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 DDX3XO00571 662 aaKnown RBP eCLIP1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 FOXN1O15353 648 aa1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 PAGE1O75459 146 aa1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 HOXB6P17509 224 aaKnown RBP1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 BMP6P22004 513 aa1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 NME2P22392 152 aa1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 ETV3P41162 512 aa1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 MAPK7Q13164 816 aa1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 MCM6Q14566 821 aa1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 NR1I3Q14994 352 aa1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 SYCE2Q6PIF2 218 aa1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 SLCO6A1Q86UG4 719 aa1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 IL17DQ8TAD2 202 aa1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 CACTINQ8WUQ7 758 aaKnown RBP1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 SMARCC1Q92922 1105 aaPredicted RBP1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 RNF38Q9H0F5 515 aa1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 MEGF9Q9H1U4 602 aa1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 SLC2A4RGQ9NR83 387 aa1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 RNF7Q9UBF6 113 aa1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 KCNH3Q9ULD8 1083 aa1.4□□□□□ -2.19
RNU6-557P-201ENST00000516842 WTIPA6NIX2 430 aaPredicted RBP1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 SMARCA5O60264 1052 aaPredicted RBP1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 KRTAP5-8O75690 187 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 DBHP09172 617 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 PROZP22891 400 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 RPL13P26373 211 aaKnown RBP1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 GRK4P32298 578 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 EPHB4P54760 987 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 FCGRTP55899 365 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 PPP2CBP62714 309 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 PPP2CAP67775 309 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 MTMR3Q13615 1198 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 AAMPQ13685 434 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 SURF1Q15526 300 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 CLEC16AQ2KHT3 1053 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 KRTAP27-1Q3LI81 207 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 FAM26FQ5R3K3 315 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 SCARA3Q6AZY7 606 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 DTHD1Q6ZMT9 781 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 RNF111Q6ZNA4 994 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 C1orf210Q8IVY1 113 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 RPUSD2Q8IZ73 545 aaKnown RBP1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 SCARB1Q8WTV0 552 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 ALG3Q92685 438 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 LCORQ96JN0 433 aaPredicted RBP1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 GORASP1Q9BQQ3 440 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 RIOX1Q9H6W3 641 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 TJP2Q9UDY2 1190 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 ACSL6Q9UKU0 697 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 TCFL5Q9UL49 500 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 CNTNAP2Q9UHC6 1331 aa1.39□□□□□ -2.19
RNU6-557P-201ENST00000516842 B4GALT4O60513 344 aa1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 TRIM37O94972 964 aa1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 LMOD1P29536 600 aaPredicted RBP1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 GJA4P35212 333 aa1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 THBS2P35442 1172 aa1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 TUBA3CQ13748 450 aa1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 BBS9Q3SYG4 887 aa1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 TCTN3Q6NUS6 607 aa1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 PRPF40BQ6NWY9 871 aaKnown RBP1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 TUBA3EQ6PEY2 450 aa1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 PAQR3Q6TCH7 311 aa1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 ARHGEF18Q6ZSZ5 1173 aa1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 HDXQ7Z353 690 aa1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 PRIMA1Q86XR5 153 aa1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 ZNF483Q8TF39 744 aaPredicted RBP1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 MBD6Q96DN6 1003 aa1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 JMJD8Q96S16 334 aa1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 EMILIN2Q9BXX0 1053 aa1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 PDGFDQ9GZP0 370 aaPredicted RBP1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 CCDC87Q9NVE4 849 aa1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 NOVA2Q9UNW9 492 aaKnown RBP1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 REXO2Q9Y3B8 237 aaKnown RBP1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 ACIN1Q9UKV3 1341 aaKnown RBP1.38□□□□□ -2.19
RNU6-557P-201ENST00000516842 GADD45BO75293 160 aaPredicted RBP1.37□□□□□ -2.19
RNU6-557P-201ENST00000516842 CYBBP04839 570 aa1.37□□□□□ -2.19
RNU6-557P-201ENST00000516842 SYPP08247 313 aa1.37□□□□□ -2.19
RNU6-557P-201ENST00000516842 MAKP20794 623 aa1.37□□□□□ -2.19
RNU6-557P-201ENST00000516842 TACR1P25103 407 aa1.37□□□□□ -2.19
RNU6-557P-201ENST00000516842 SCRN1Q12765 414 aa1.37□□□□□ -2.19
RNU6-557P-201ENST00000516842 ORC1Q13415 861 aa1.37□□□□□ -2.19
RNU6-557P-201ENST00000516842 KLHL22Q53GT1 634 aa1.37□□□□□ -2.19
RNU6-557P-201ENST00000516842 HS1BP3Q53T59 392 aa1.37□□□□□ -2.19
RNU6-557P-201ENST00000516842 AGBL4Q5VU57 503 aa1.37□□□□□ -2.19
RNU6-557P-201ENST00000516842 SLFN13Q68D06 897 aa1.37□□□□□ -2.19
RNU6-557P-201ENST00000516842 SP5Q6BEB4 398 aaPredicted RBP1.37□□□□□ -2.19
RNU6-557P-201ENST00000516842 LAIR1Q6GTX8 287 aa1.37□□□□□ -2.19
RNU6-557P-201ENST00000516842 ULK2Q8IYT8 1036 aa1.37□□□□□ -2.19
RNU6-557P-201ENST00000516842 VSIG10Q8N0Z9 540 aa1.37□□□□□ -2.19
RNU6-557P-201ENST00000516842 LINC00482Q8N8I6 264 aa1.37□□□□□ -2.19
RNU6-557P-201ENST00000516842 TCTN2Q96GX1 697 aa1.37□□□□□ -2.19
RNU6-557P-201ENST00000516842 PPP1R12CQ9BZL4 782 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms