RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 ANKRD35Q8N283 1001 aa21.9■■□□□ 1.1
SPOP-220ENST00000515508 SEC62Q99442 399 aaKnown RBP21.9■■□□□ 1.1
SPOP-220ENST00000515508 NACAP1Q9BZK3 213 aa21.9■■□□□ 1.1
SPOP-220ENST00000515508 UPF3AQ9H1J1 476 aaKnown RBP21.9■■□□□ 1.1
SPOP-220ENST00000515508 TMEM39AQ9NV64 488 aa21.9■■□□□ 1.1
SPOP-220ENST00000515508 ELP1O95163 1332 aa21.89■■□□□ 1.1
SPOP-220ENST00000515508 TMEM265A0A087WTH1 108 aa21.89■■□□□ 1.09
SPOP-220ENST00000515508 DCDC2CA8MYV0 355 aa21.89■■□□□ 1.09
SPOP-220ENST00000515508 ERC2O15083 957 aa21.89■■□□□ 1.09
SPOP-220ENST00000515508 BMP3P12645 472 aa21.89■■□□□ 1.09
SPOP-220ENST00000515508 SLC4A3P48751 1232 aa21.89■■□□□ 1.09
SPOP-220ENST00000515508 SLFN13Q68D06 897 aa21.89■■□□□ 1.09
SPOP-220ENST00000515508 ARMCX2Q7L311 632 aa21.89■■□□□ 1.09
SPOP-220ENST00000515508 COL25A1Q9BXS0 654 aaPredicted RBP21.89■■□□□ 1.09
SPOP-220ENST00000515508 TBX21Q9UL17 535 aa21.89■■□□□ 1.09
SPOP-220ENST00000515508 MROH7Q68CQ1 1323 aa21.88■■□□□ 1.09
SPOP-220ENST00000515508 STAT2P52630 851 aa21.88■■□□□ 1.09
SPOP-220ENST00000515508 GJA9P57773 515 aa21.88■■□□□ 1.09
SPOP-220ENST00000515508 PPARAQ07869 468 aa21.88■■□□□ 1.09
SPOP-220ENST00000515508 CCDC144BQ3MJ40 725 aa21.88■■□□□ 1.09
SPOP-220ENST00000515508 ZMYM1Q5SVZ6 1142 aa21.88■■□□□ 1.09
SPOP-220ENST00000515508 PCSK9Q8NBP7 692 aaKnown RBP21.88■■□□□ 1.09
SPOP-220ENST00000515508 GMCL1Q96IK5 515 aa21.88■■□□□ 1.09
SPOP-220ENST00000515508 KATNBL1Q9H079 304 aa21.88■■□□□ 1.09
SPOP-220ENST00000515508 NAPBQ9H115 298 aa21.88■■□□□ 1.09
SPOP-220ENST00000515508 SLC3A2P08195 630 aaKnown RBP21.87■■□□□ 1.09
SPOP-220ENST00000515508 C6orf222P0C671 652 aaPredicted RBP21.87■■□□□ 1.09
SPOP-220ENST00000515508 CDK7P50613 346 aa21.87■■□□□ 1.09
SPOP-220ENST00000515508 CCDC144CPQ8IYA2 1237 aa21.87■■□□□ 1.09
SPOP-220ENST00000515508 GLT1D1Q96MS3 346 aa21.87■■□□□ 1.09
SPOP-220ENST00000515508 FSD1Q9BTV5 496 aa21.87■■□□□ 1.09
SPOP-220ENST00000515508 ACAD9Q9H845 621 aa21.87■■□□□ 1.09
SPOP-220ENST00000515508 ZNF536O15090 1300 aa21.86■■□□□ 1.09
SPOP-220ENST00000515508 TMEM232C9JQI7 657 aa21.86■■□□□ 1.09
SPOP-220ENST00000515508 FOXP2O15409 715 aa21.86■■□□□ 1.09
SPOP-220ENST00000515508 TIMP1P01033 207 aa21.86■■□□□ 1.09
SPOP-220ENST00000515508 ASGR1P07306 291 aa21.86■■□□□ 1.09
SPOP-220ENST00000515508 NKX3-2P78367 333 aa21.86■■□□□ 1.09
SPOP-220ENST00000515508 IRX5P78411 483 aaPredicted RBP21.86■■□□□ 1.09
SPOP-220ENST00000515508 TFAP4Q01664 338 aa21.86■■□□□ 1.09
SPOP-220ENST00000515508 FAM160B2Q86V87 743 aa21.86■■□□□ 1.09
SPOP-220ENST00000515508 FAM133AQ8N9E0 248 aa21.86■■□□□ 1.09
SPOP-220ENST00000515508 MAFAQ8NHW3 353 aaPredicted RBP21.86■■□□□ 1.09
SPOP-220ENST00000515508 OTUD7AQ8TE49 926 aaPredicted RBP21.86■■□□□ 1.09
SPOP-220ENST00000515508 MYLIPQ8WY64 445 aa21.86■■□□□ 1.09
SPOP-220ENST00000515508 SPC25Q9HBM1 224 aa21.86■■□□□ 1.09
SPOP-220ENST00000515508 HOMER2Q9NSB8 354 aa21.86■■□□□ 1.09
SPOP-220ENST00000515508 SPTBN5Q9NRC6 3674 aaKnown RBP21.86■■□□□ 1.09
SPOP-220ENST00000515508 LCTP09848 1927 aa21.85■■□□□ 1.09
SPOP-220ENST00000515508 CTAGE5O15320 804 aa21.85■■□□□ 1.09
SPOP-220ENST00000515508 PLA2G6O60733 806 aa21.85■■□□□ 1.09
SPOP-220ENST00000515508 PPP4R3BQ5MIZ7 849 aa21.85■■□□□ 1.09
SPOP-220ENST00000515508 A1CFQ9NQ94 594 aaKnown RBP21.85■■□□□ 1.09
SPOP-220ENST00000515508 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.85■■□□□ 1.09
SPOP-220ENST00000515508 PCDHB15Q9Y5E8 787 aa21.85■■□□□ 1.09
SPOP-220ENST00000515508 SALL3Q9BXA9 1300 aa21.84■■□□□ 1.09
SPOP-220ENST00000515508 CNTN2Q02246 1040 aa21.84■■□□□ 1.09
SPOP-220ENST00000515508 MFSD5Q6N075 450 aa21.84■■□□□ 1.09
SPOP-220ENST00000515508 CHURC1Q8WUH1 139 aa21.84■■□□□ 1.09
SPOP-220ENST00000515508 STAG1Q8WVM7 1258 aa21.84■■□□□ 1.09
SPOP-220ENST00000515508 RNF146Q9NTX7 359 aa21.84■■□□□ 1.09
SPOP-220ENST00000515508 A0A0U1RQG5 324 aaPredicted RBP21.83■■□□□ 1.09
SPOP-220ENST00000515508 ARVCFO00192 962 aa21.83■■□□□ 1.09
SPOP-220ENST00000515508 MX1P20591 662 aa21.83■■□□□ 1.09
SPOP-220ENST00000515508 SLC1A4P43007 532 aa21.83■■□□□ 1.09
SPOP-220ENST00000515508 TKFCQ3LXA3 575 aa21.83■■□□□ 1.09
SPOP-220ENST00000515508 AGBL1Q96MI9 1066 aa21.83■■□□□ 1.09
SPOP-220ENST00000515508 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.82■■□□□ 1.08
SPOP-220ENST00000515508 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.82■■□□□ 1.08
SPOP-220ENST00000515508 SOWAHBA6NEL2 793 aa21.82■■□□□ 1.08
SPOP-220ENST00000515508 FOSL2P15408 326 aa21.82■■□□□ 1.08
SPOP-220ENST00000515508 DNAJB2P25686 324 aa21.82■■□□□ 1.08
SPOP-220ENST00000515508 GNASQ5JWF2 1037 aa21.82■■□□□ 1.08
SPOP-220ENST00000515508 FAM126BQ8IXS8 530 aa21.82■■□□□ 1.08
SPOP-220ENST00000515508 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.82■■□□□ 1.082e-9■■■■■ 45.2
SPOP-220ENST00000515508 IL17RBQ9NRM6 502 aa21.82■■□□□ 1.08
SPOP-220ENST00000515508 CHD9Q3L8U1 2897 aa21.81■■□□□ 1.08
SPOP-220ENST00000515508 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.81■■□□□ 1.08
SPOP-220ENST00000515508 MCCP23508 829 aa21.81■■□□□ 1.08
SPOP-220ENST00000515508 IKQ13123 557 aaPredicted RBP21.81■■□□□ 1.08
SPOP-220ENST00000515508 PPIGQ13427 754 aaKnown RBP eCLIP21.81■■□□□ 1.08
SPOP-220ENST00000515508 ISY1Q9ULR0 285 aaKnown RBP21.81■■□□□ 1.08
SPOP-220ENST00000515508 STX8Q9UNK0 236 aa21.81■■□□□ 1.08
SPOP-220ENST00000515508 ASTN1O14525 1302 aa21.8■■□□□ 1.08
SPOP-220ENST00000515508 ASB14A6NK59 587 aa21.8■■□□□ 1.08
SPOP-220ENST00000515508 TSPY2A6NKD2 308 aa21.8■■□□□ 1.08
SPOP-220ENST00000515508 NOVP48745 357 aa21.8■■□□□ 1.08
SPOP-220ENST00000515508 TNFAIP2Q03169 654 aa21.8■■□□□ 1.08
SPOP-220ENST00000515508 RASIP1Q5U651 963 aa21.8■■□□□ 1.08
SPOP-220ENST00000515508 RCSD1Q6JBY9 416 aa21.8■■□□□ 1.08
SPOP-220ENST00000515508 KCTD1Q719H9 257 aa21.8■■□□□ 1.08
SPOP-220ENST00000515508 TRERF1Q96PN7 1200 aa21.8■■□□□ 1.08
SPOP-220ENST00000515508 ANAPC4Q9UJX5 808 aa21.8■■□□□ 1.08
SPOP-220ENST00000515508 GNEQ9Y223 722 aaKnown RBP21.8■■□□□ 1.08
SPOP-220ENST00000515508 NMT2O60551 498 aa21.79■■□□□ 1.08
SPOP-220ENST00000515508 ALAS1P13196 640 aa21.79■■□□□ 1.08
SPOP-220ENST00000515508 CTDSPL2Q05D32 466 aa21.79■■□□□ 1.08
SPOP-220ENST00000515508 CCDC174Q6PII3 467 aa21.79■■□□□ 1.08
SPOP-220ENST00000515508 CCDC129Q6ZRS4 1044 aa21.79■■□□□ 1.08
SPOP-220ENST00000515508 C16orf59Q7L2K0 433 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms