RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 MGAMO43451 1857 aa13.47□□□□□ -0.25
SUB1-213ENST00000515355 COBLO75128 1261 aa13.47□□□□□ -0.25
SUB1-213ENST00000515355 TFRCP02786 760 aaKnown RBP13.47□□□□□ -0.25
SUB1-213ENST00000515355 FDX1P10109 184 aa13.47□□□□□ -0.25
SUB1-213ENST00000515355 XRCC5P13010 732 aaKnown RBP13.47□□□□□ -0.25
SUB1-213ENST00000515355 CNGA1P29973 690 aa13.47□□□□□ -0.25
SUB1-213ENST00000515355 CYP2C19P33261 490 aa13.47□□□□□ -0.25
SUB1-213ENST00000515355 MCM5P33992 734 aa13.47□□□□□ -0.25
SUB1-213ENST00000515355 COPB2P35606 906 aa13.47□□□□□ -0.25
SUB1-213ENST00000515355 GPATCH4Q5T3I0 446 aaKnown RBP13.47□□□□□ -0.25
SUB1-213ENST00000515355 MB21D2Q8IYB1 491 aaPredicted RBP13.47□□□□□ -0.25
SUB1-213ENST00000515355 TRMT44Q8IYL2 757 aaKnown RBP13.47□□□□□ -0.25
SUB1-213ENST00000515355 USP6NLQ92738 828 aa13.47□□□□□ -0.25
SUB1-213ENST00000515355 DEFB118Q96PH6 123 aa13.47□□□□□ -0.25
SUB1-213ENST00000515355 TRERF1Q96PN7 1200 aa13.47□□□□□ -0.25
SUB1-213ENST00000515355 SENP2Q9HC62 589 aa13.47□□□□□ -0.25
SUB1-213ENST00000515355 HMX1Q9NP08 348 aaPredicted RBP13.47□□□□□ -0.25
SUB1-213ENST00000515355 FLRT1Q9NZU1 646 aa13.47□□□□□ -0.25
SUB1-213ENST00000515355 DOCK3Q8IZD9 2030 aa13.46□□□□□ -0.25
SUB1-213ENST00000515355 PLA2G6O60733 806 aa13.46□□□□□ -0.25
SUB1-213ENST00000515355 REC8O95072 547 aa13.46□□□□□ -0.25
SUB1-213ENST00000515355 OAZ1P54368 228 aa13.46□□□□□ -0.25
SUB1-213ENST00000515355 ANTXR2P58335 489 aa13.46□□□□□ -0.25
SUB1-213ENST00000515355 MLLT1Q03111 559 aaPredicted RBP13.46□□□□□ -0.25
SUB1-213ENST00000515355 SEC23AQ15436 765 aa13.46□□□□□ -0.25
SUB1-213ENST00000515355 CATIPQ7Z7H3 387 aa13.46□□□□□ -0.25
SUB1-213ENST00000515355 ANKS1AQ92625 1134 aa13.46□□□□□ -0.25
SUB1-213ENST00000515355 NEK1Q96PY6 1258 aa13.46□□□□□ -0.25
SUB1-213ENST00000515355 GPHNQ9NQX3 736 aaPredicted RBP13.46□□□□□ -0.25
SUB1-213ENST00000515355 RNF146Q9NTX7 359 aa13.46□□□□□ -0.25
SUB1-213ENST00000515355 CCDC69A6NI79 296 aa13.45□□□□□ -0.26
SUB1-213ENST00000515355 FGD1P98174 961 aa13.45□□□□□ -0.26
SUB1-213ENST00000515355 CACNB2Q08289 660 aaPredicted RBP13.45□□□□□ -0.26
SUB1-213ENST00000515355 USH1GQ495M9 461 aa13.45□□□□□ -0.26
SUB1-213ENST00000515355 ASPRV1Q53RT3 343 aa13.45□□□□□ -0.26
SUB1-213ENST00000515355 BTNL9Q6UXG8 535 aa13.45□□□□□ -0.26
SUB1-213ENST00000515355 NSMFQ6X4W1 530 aa13.45□□□□□ -0.26
SUB1-213ENST00000515355 RAB11FIP4Q86YS3 637 aa13.45□□□□□ -0.26
SUB1-213ENST00000515355 RASEFQ8IZ41 740 aa13.45□□□□□ -0.26
SUB1-213ENST00000515355 ABRAQ8N0Z2 381 aa13.45□□□□□ -0.26
SUB1-213ENST00000515355 STAG2Q8N3U4 1231 aa13.45□□□□□ -0.26
SUB1-213ENST00000515355 CHST13Q8NET6 341 aa13.45□□□□□ -0.26
SUB1-213ENST00000515355 PIBF1Q8WXW3 757 aa13.45□□□□□ -0.26
SUB1-213ENST00000515355 TCEANC2Q96MN5 208 aa13.45□□□□□ -0.26
SUB1-213ENST00000515355 MYL10Q9BUA6 226 aa13.45□□□□□ -0.26
SUB1-213ENST00000515355 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.45□□□□□ -0.267e-10■■□□□ 14.4
SUB1-213ENST00000515355 ACAD9Q9H845 621 aa13.45□□□□□ -0.26
SUB1-213ENST00000515355 FBXO40Q9UH90 709 aa13.45□□□□□ -0.26
SUB1-213ENST00000515355 NAP1L2Q9ULW6 460 aaPredicted RBP13.45□□□□□ -0.26
SUB1-213ENST00000515355 ZNF536O15090 1300 aa13.44□□□□□ -0.26
SUB1-213ENST00000515355 RPTORQ8N122 1335 aa13.44□□□□□ -0.26
SUB1-213ENST00000515355 KLRF2D3W0D1 207 aa13.44□□□□□ -0.26
SUB1-213ENST00000515355 ATP2A1O14983 1001 aa13.44□□□□□ -0.26
SUB1-213ENST00000515355 SNHG28P0DPA3 235 aa13.44□□□□□ -0.26
SUB1-213ENST00000515355 CCND3P30281 292 aaPredicted RBP13.44□□□□□ -0.26
SUB1-213ENST00000515355 COL9A3Q14050 684 aaPredicted RBP13.44□□□□□ -0.26
SUB1-213ENST00000515355 MUM1L1Q5H9M0 696 aa13.44□□□□□ -0.26
SUB1-213ENST00000515355 PRAMEF19Q5SWL8 479 aa13.44□□□□□ -0.26
SUB1-213ENST00000515355 CCDC144CPQ8IYA2 1237 aa13.44□□□□□ -0.26
SUB1-213ENST00000515355 ADGRF4Q8IZF3 695 aa13.44□□□□□ -0.26
SUB1-213ENST00000515355 IGDCC4Q8TDY8 1250 aa13.44□□□□□ -0.26
SUB1-213ENST00000515355 U2AF1L4Q8WU68 220 aaKnown RBP13.44□□□□□ -0.26
SUB1-213ENST00000515355 RANBP17Q9H2T7 1088 aaKnown RBP13.44□□□□□ -0.26
SUB1-213ENST00000515355 LAMA4Q16363 1823 aa13.43□□□□□ -0.26
SUB1-213ENST00000515355 RLFQ13129 1914 aa13.43□□□□□ -0.26
SUB1-213ENST00000515355 PTPDC1A2A3K4 754 aa13.43□□□□□ -0.26
SUB1-213ENST00000515355 POTEB2H3BUK9 544 aa13.43□□□□□ -0.26
SUB1-213ENST00000515355 ICAM1P05362 532 aa13.43□□□□□ -0.26
SUB1-213ENST00000515355 GJB1P08034 283 aa13.43□□□□□ -0.26
SUB1-213ENST00000515355 HOXC6P09630 235 aa13.43□□□□□ -0.26
SUB1-213ENST00000515355 CPA1P15085 419 aa13.43□□□□□ -0.26
SUB1-213ENST00000515355 RXRAP19793 462 aa13.43□□□□□ -0.26
SUB1-213ENST00000515355 KRT32Q14532 448 aa13.43□□□□□ -0.26
SUB1-213ENST00000515355 CDC37Q16543 378 aaPredicted RBP13.43□□□□□ -0.26
SUB1-213ENST00000515355 ADCK5Q3MIX3 580 aa13.43□□□□□ -0.26
SUB1-213ENST00000515355 ANO1Q5XXA6 986 aa13.43□□□□□ -0.26
SUB1-213ENST00000515355 HOMER1Q86YM7 354 aa13.43□□□□□ -0.26
SUB1-213ENST00000515355 MAML3Q96JK9 1138 aa13.43□□□□□ -0.26
SUB1-213ENST00000515355 TMEM87BQ96K49 555 aa13.43□□□□□ -0.26
SUB1-213ENST00000515355 JAKMIP1Q96N16 626 aaKnown RBP13.43□□□□□ -0.26
SUB1-213ENST00000515355 LY9Q9HBG7 655 aa13.43□□□□□ -0.26
SUB1-213ENST00000515355 SH2B2O14492 632 aaPredicted RBP13.42□□□□□ -0.26
SUB1-213ENST00000515355 SGPL1O95470 568 aa13.42□□□□□ -0.26
SUB1-213ENST00000515355 CNTN2Q02246 1040 aa13.42□□□□□ -0.26
SUB1-213ENST00000515355 TKFCQ3LXA3 575 aa13.42□□□□□ -0.26
SUB1-213ENST00000515355 SYNE3Q6ZMZ3 975 aa13.42□□□□□ -0.26
SUB1-213ENST00000515355 ZNF654Q8IZM8 581 aa13.42□□□□□ -0.26
SUB1-213ENST00000515355 CTCFLQ8NI51 663 aaPredicted RBP13.42□□□□□ -0.26
SUB1-213ENST00000515355 MAD2L2Q9UI95 211 aa13.42□□□□□ -0.26
SUB1-213ENST00000515355 SLC12A7Q9Y666 1083 aa13.42□□□□□ -0.26
SUB1-213ENST00000515355 COL11A1P12107 1806 aaPredicted RBP13.41□□□□□ -0.26
SUB1-213ENST00000515355 CALML3P27482 149 aa13.41□□□□□ -0.26
SUB1-213ENST00000515355 HSPA4P34932 840 aa13.41□□□□□ -0.26
SUB1-213ENST00000515355 GJA8P48165 433 aa13.41□□□□□ -0.26
SUB1-213ENST00000515355 RGS19P49795 217 aa13.41□□□□□ -0.26
SUB1-213ENST00000515355 GRM4Q14833 912 aa13.41□□□□□ -0.26
SUB1-213ENST00000515355 QRICH1Q2TAL8 776 aa13.41□□□□□ -0.26
SUB1-213ENST00000515355 ZNF792Q3KQV3 632 aa13.41□□□□□ -0.26
SUB1-213ENST00000515355 OLFML2BQ68BL8 750 aa13.41□□□□□ -0.26
SUB1-213ENST00000515355 DHX32Q7L7V1 743 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms