RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 NAP1L4Q99733 375 aaKnown RBP8.54□□□□□ -1.04
NPHP3-211ENST00000515289 LGR4Q9BXB1 951 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 SLC13A1Q9BZW2 595 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 TJP2Q9UDY2 1190 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 IP6K2Q9UHH9 426 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 USP25Q9UHP3 1055 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 TAGLN3Q9UI15 199 aa8.54□□□□□ -1.04
NPHP3-211ENST00000515289 LUC7L2Q9Y383 392 aaKnown RBP8.54□□□□□ -1.04
NPHP3-211ENST00000515289 DLX3O60479 287 aa8.53□□□□□ -1.04
NPHP3-211ENST00000515289 CLEC3AO75596 197 aa8.53□□□□□ -1.04
NPHP3-211ENST00000515289 PPM1BO75688 479 aa8.53□□□□□ -1.04
NPHP3-211ENST00000515289 CT47B1P0C2W7 299 aaPredicted RBP8.53□□□□□ -1.04
NPHP3-211ENST00000515289 NBPF7P0C2Y1 421 aaPredicted RBP8.53□□□□□ -1.04
NPHP3-211ENST00000515289 HTR3AP46098 478 aa8.53□□□□□ -1.04
NPHP3-211ENST00000515289 PICALMQ13492 652 aa8.53□□□□□ -1.04
NPHP3-211ENST00000515289 PDE3AQ14432 1141 aa8.53□□□□□ -1.04
NPHP3-211ENST00000515289 PTPN21Q16825 1174 aa8.53□□□□□ -1.04
NPHP3-211ENST00000515289 MINDY4Q4G0A6 757 aa8.53□□□□□ -1.04
NPHP3-211ENST00000515289 C12orf40Q86WS4 652 aa8.53□□□□□ -1.04
NPHP3-211ENST00000515289 MRPL41Q8IXM3 137 aaKnown RBP8.53□□□□□ -1.04
NPHP3-211ENST00000515289 CRACR2BQ8N4Y2 399 aaPredicted RBP8.53□□□□□ -1.04
NPHP3-211ENST00000515289 PJA1Q8NG27 643 aa8.53□□□□□ -1.04
NPHP3-211ENST00000515289 TMEM87BQ96K49 555 aa8.53□□□□□ -1.04
NPHP3-211ENST00000515289 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.53□□□□□ -1.04
NPHP3-211ENST00000515289 WHRNQ9P202 907 aa8.53□□□□□ -1.04
NPHP3-211ENST00000515289 PNMA8BQ9ULN7 279 aaPredicted RBP8.53□□□□□ -1.04
NPHP3-211ENST00000515289 EMC9Q9Y3B6 208 aa8.53□□□□□ -1.04
NPHP3-211ENST00000515289 KDM5BQ9UGL1 1544 aa8.53□□□□□ -1.04
NPHP3-211ENST00000515289 ADGRL2O95490 1459 aa8.52□□□□□ -1.05
NPHP3-211ENST00000515289 CDC42BPAQ5VT25 1732 aa8.52□□□□□ -1.05
NPHP3-211ENST00000515289 KDM6BO15054 1643 aa8.52□□□□□ -1.05
NPHP3-211ENST00000515289 PRKD3O94806 890 aa8.52□□□□□ -1.05
NPHP3-211ENST00000515289 TMEM95Q3KNT9 176 aa8.52□□□□□ -1.05
NPHP3-211ENST00000515289 ANKRD39Q53RE8 183 aa8.52□□□□□ -1.05
NPHP3-211ENST00000515289 INO80DQ53TQ3 878 aaPredicted RBP8.52□□□□□ -1.05
NPHP3-211ENST00000515289 ACBD5Q5T8D3 534 aaPredicted RBP8.52□□□□□ -1.05
NPHP3-211ENST00000515289 SLC6A19Q695T7 634 aa8.52□□□□□ -1.05
NPHP3-211ENST00000515289 ZCCHC8Q6NZY4 707 aaKnown RBP8.52□□□□□ -1.05
NPHP3-211ENST00000515289 POMZP3Q6PJE2 187 aa8.52□□□□□ -1.05
NPHP3-211ENST00000515289 ADAT2Q7Z6V5 191 aaKnown RBP8.52□□□□□ -1.05
NPHP3-211ENST00000515289 TRIM59Q8IWR1 403 aa8.52□□□□□ -1.05
NPHP3-211ENST00000515289 CCDC144CPQ8IYA2 1237 aa8.52□□□□□ -1.05
NPHP3-211ENST00000515289 CBARPQ8N350 705 aaPredicted RBP8.52□□□□□ -1.05
NPHP3-211ENST00000515289 USP33Q8TEY7 942 aa8.52□□□□□ -1.05
NPHP3-211ENST00000515289 WDR89Q96FK6 387 aaPredicted RBP8.52□□□□□ -1.05
NPHP3-211ENST00000515289 RCC1LQ96I51 464 aaKnown RBP8.52□□□□□ -1.05
NPHP3-211ENST00000515289 CCDC74BQ96LY2 380 aa8.52□□□□□ -1.05
NPHP3-211ENST00000515289 SENP7Q9BQF6 1050 aa8.52□□□□□ -1.05
NPHP3-211ENST00000515289 HIF3AQ9Y2N7 669 aa8.52□□□□□ -1.05
NPHP3-211ENST00000515289 ANO9A1A5B4 782 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 SPDYE3A6NKU9 549 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 MAN1A2O60476 641 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 PHKG2P15735 406 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 LIG1P18858 919 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 PTSQ03393 145 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 MAP4K2Q12851 820 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 FAPQ12884 760 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 GBX1Q14549 363 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 ABCB5Q2M3G0 1257 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 FOXD4L6Q3SYB3 417 aaPredicted RBP8.51□□□□□ -1.05
NPHP3-211ENST00000515289 PIK3R6Q5UE93 754 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 GDF6Q6KF10 455 aaPredicted RBP8.51□□□□□ -1.05
NPHP3-211ENST00000515289 FOXD4L3Q6VB84 417 aaPredicted RBP8.51□□□□□ -1.05
NPHP3-211ENST00000515289 TPH2Q8IWU9 490 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 KCTD13Q8WZ19 329 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 TIFAQ96CG3 184 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 ZNF837Q96EG3 531 aaPredicted RBP8.51□□□□□ -1.05
NPHP3-211ENST00000515289 WNK4Q96J92 1243 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 CASS4Q9NQ75 786 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 CFDP1Q9UEE9 299 aaPredicted RBP8.51□□□□□ -1.05
NPHP3-211ENST00000515289 ANKRD6Q9Y2G4 727 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 PCDHGC5Q9Y5F6 944 aa8.51□□□□□ -1.05
NPHP3-211ENST00000515289 DENND4BO75064 1496 aaPredicted RBP8.51□□□□□ -1.05
NPHP3-211ENST00000515289 M0R2C6 588 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 FANCGO15287 622 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 SNUPNO95149 360 aaKnown RBP8.5□□□□□ -1.05
NPHP3-211ENST00000515289 CTSBP07858 339 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 GBP1P32455 592 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 ERVK-24P63145 666 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 CTBSQ01459 385 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 NTRK3Q16288 839 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 INAVAQ3KP66 663 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 HP1BP3Q5SSJ5 553 aaPredicted RBP8.5□□□□□ -1.05
NPHP3-211ENST00000515289 TMEM240Q5SV17 173 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 ZBTB37Q5TC79 503 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 DCAF15Q66K64 600 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 IQSEC1Q6DN90 963 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 IL31Q6EBC2 164 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 BTN2A2Q8WVV5 523 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 FUBP3Q96I24 572 aaKnown RBP eCLIP8.5□□□□□ -1.05
NPHP3-211ENST00000515289 RRP7BPQ9NSQ0 103 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 GDF2Q9UK05 429 aaPredicted RBP8.5□□□□□ -1.05
NPHP3-211ENST00000515289 AKT3Q9Y243 479 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 ZNF451Q9Y4E5 1061 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 CSADQ9Y600 493 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 ZCCHC11Q5TAX3 1644 aaKnown RBP8.5□□□□□ -1.05
NPHP3-211ENST00000515289 PREX2Q70Z35 1606 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 SHANK2Q9UPX8 1470 aa8.5□□□□□ -1.05
NPHP3-211ENST00000515289 CROCC2H7BZ55 1655 aa8.49□□□□□ -1.05
NPHP3-211ENST00000515289 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms