RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 CCDC8Q9H0W5 538 aaPredicted RBP14.3□□□□□ -0.12
CSF1R-208ENST00000515239 DCP1AQ9NPI6 582 aaPredicted RBP14.3□□□□□ -0.12
CSF1R-208ENST00000515239 SWAP70Q9UH65 585 aa14.3□□□□□ -0.12
CSF1R-208ENST00000515239 BRWD1Q9NSI6 2320 aa14.3□□□□□ -0.12
CSF1R-208ENST00000515239 CABYRO75952 493 aa14.29□□□□□ -0.12
CSF1R-208ENST00000515239 NHLH1Q02575 133 aa14.29□□□□□ -0.12
CSF1R-208ENST00000515239 GRB10Q13322 594 aa14.29□□□□□ -0.12
CSF1R-208ENST00000515239 FAM83BQ5T0W9 1011 aa14.29□□□□□ -0.12
CSF1R-208ENST00000515239 SDR42E1Q8WUS8 393 aa14.29□□□□□ -0.12
CSF1R-208ENST00000515239 ARNTL2Q8WYA1 636 aa14.29□□□□□ -0.12
CSF1R-208ENST00000515239 ARHGAP45Q92619 1136 aa14.29□□□□□ -0.12
CSF1R-208ENST00000515239 TEX13BQ9BXU2 312 aa14.29□□□□□ -0.12
CSF1R-208ENST00000515239 ASTN1O14525 1302 aa14.29□□□□□ -0.12
CSF1R-208ENST00000515239 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.28□□□□□ -0.12
CSF1R-208ENST00000515239 DIEXFQ68CQ4 756 aaKnown RBP14.28□□□□□ -0.12
CSF1R-208ENST00000515239 SNRNP48Q6IEG0 339 aaKnown RBP14.28□□□□□ -0.12
CSF1R-208ENST00000515239 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.28□□□□□ -0.12
CSF1R-208ENST00000515239 ARMCX2Q7L311 632 aa14.28□□□□□ -0.12
CSF1R-208ENST00000515239 FAM178BQ8IXR5 827 aa14.28□□□□□ -0.12
CSF1R-208ENST00000515239 GJD3Q8N144 294 aa14.28□□□□□ -0.12
CSF1R-208ENST00000515239 CCDC17Q96LX7 622 aa14.28□□□□□ -0.12
CSF1R-208ENST00000515239 SEZ6LQ9BYH1 1024 aa14.28□□□□□ -0.12
CSF1R-208ENST00000515239 GNEQ9Y223 722 aaKnown RBP14.28□□□□□ -0.12
CSF1R-208ENST00000515239 MCM3APO60318 1980 aa14.27□□□□□ -0.12
CSF1R-208ENST00000515239 ATP2A1O14983 1001 aa14.27□□□□□ -0.13
CSF1R-208ENST00000515239 SURF6O75683 361 aaKnown RBP14.27□□□□□ -0.13
CSF1R-208ENST00000515239 PFKMP08237 780 aa14.27□□□□□ -0.13
CSF1R-208ENST00000515239 CT47B1P0C2W7 299 aaPredicted RBP14.27□□□□□ -0.13
CSF1R-208ENST00000515239 CDK8P49336 464 aa14.27□□□□□ -0.13
CSF1R-208ENST00000515239 TNFAIP2Q03169 654 aa14.27□□□□□ -0.13
CSF1R-208ENST00000515239 OS9Q13438 667 aaPredicted RBP14.27□□□□□ -0.13
CSF1R-208ENST00000515239 SPRED2Q7Z698 418 aa14.27□□□□□ -0.13
CSF1R-208ENST00000515239 CCDC144CPQ8IYA2 1237 aa14.27□□□□□ -0.13
CSF1R-208ENST00000515239 PHOSPHO2Q8TCD6 241 aa14.27□□□□□ -0.13
CSF1R-208ENST00000515239 SSH3Q8TE77 659 aa14.27□□□□□ -0.13
CSF1R-208ENST00000515239 KANSL2Q9H9L4 492 aa14.27□□□□□ -0.13
CSF1R-208ENST00000515239 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.26□□□□□ -0.13
CSF1R-208ENST00000515239 PTGS1P23219 599 aa14.26□□□□□ -0.13
CSF1R-208ENST00000515239 PSMC6P62333 389 aa14.26□□□□□ -0.13
CSF1R-208ENST00000515239 FSCN1Q16658 493 aaKnown RBP14.26□□□□□ -0.13
CSF1R-208ENST00000515239 DEFB128Q7Z7B8 93 aa14.26□□□□□ -0.13
CSF1R-208ENST00000515239 CPXCR1Q8N123 301 aa14.26□□□□□ -0.13
CSF1R-208ENST00000515239 FBXL18Q96ME1 805 aa14.26□□□□□ -0.13
CSF1R-208ENST00000515239 SLF1Q9BQI6 1058 aa14.26□□□□□ -0.13
CSF1R-208ENST00000515239 GOPCQ9HD26 462 aa14.26□□□□□ -0.13
CSF1R-208ENST00000515239 NAV1Q8NEY1 1877 aa14.26□□□□□ -0.13
CSF1R-208ENST00000515239 PDE6AP16499 860 aa14.25□□□□□ -0.13
CSF1R-208ENST00000515239 SLC4A3P48751 1232 aa14.25□□□□□ -0.13
CSF1R-208ENST00000515239 RARSP54136 660 aaKnown RBP14.25□□□□□ -0.13
CSF1R-208ENST00000515239 ATP8B2P98198 1209 aa14.25□□□□□ -0.13
CSF1R-208ENST00000515239 SLC9C2Q5TAH2 1124 aa14.25□□□□□ -0.13
CSF1R-208ENST00000515239 NOL8Q76FK4 1167 aaKnown RBP14.25□□□□□ -0.13
CSF1R-208ENST00000515239 HERC6Q8IVU3 1022 aa14.25□□□□□ -0.13
CSF1R-208ENST00000515239 ANKRD35Q8N283 1001 aa14.25□□□□□ -0.13
CSF1R-208ENST00000515239 LCORLQ8N3X6 602 aa14.25□□□□□ -0.13
CSF1R-208ENST00000515239 UIMC1Q96RL1 719 aa14.25□□□□□ -0.13
CSF1R-208ENST00000515239 SLC9A7Q96T83 725 aa14.25□□□□□ -0.13
CSF1R-208ENST00000515239 NUP88Q99567 741 aaPredicted RBP14.25□□□□□ -0.13
CSF1R-208ENST00000515239 ALDH8A1Q9H2A2 487 aaPredicted RBP14.25□□□□□ -0.13
CSF1R-208ENST00000515239 LMCD1Q9NZU5 365 aa14.25□□□□□ -0.13
CSF1R-208ENST00000515239 NOP58Q9Y2X3 529 aaKnown RBP14.25□□□□□ -0.13
CSF1R-208ENST00000515239 ZNF532Q9HCE3 1301 aa14.24□□□□□ -0.13
CSF1R-208ENST00000515239 CYP2D7A0A087X1C5 515 aa14.24□□□□□ -0.13
CSF1R-208ENST00000515239 TCRBV5S4A2TA0A5A2 114 aa14.24□□□□□ -0.13
CSF1R-208ENST00000515239 DYNC1LI2O43237 492 aaPredicted RBP14.24□□□□□ -0.13
CSF1R-208ENST00000515239 ANP32CO43423 234 aa14.24□□□□□ -0.13
CSF1R-208ENST00000515239 PRKAB2O43741 272 aa14.24□□□□□ -0.13
CSF1R-208ENST00000515239 RAD21O60216 631 aa14.24□□□□□ -0.13
CSF1R-208ENST00000515239 BCAR3O75815 825 aa14.24□□□□□ -0.13
CSF1R-208ENST00000515239 CYP2C9P11712 490 aa14.24□□□□□ -0.13
CSF1R-208ENST00000515239 ALADP13716 330 aa14.24□□□□□ -0.13
CSF1R-208ENST00000515239 SMPD1P17405 629 aa14.24□□□□□ -0.13
CSF1R-208ENST00000515239 CNTN2Q02246 1040 aa14.24□□□□□ -0.13
CSF1R-208ENST00000515239 C12orf60Q5U649 245 aa14.24□□□□□ -0.13
CSF1R-208ENST00000515239 TLK2Q86UE8 772 aa14.24□□□□□ -0.13
CSF1R-208ENST00000515239 PRPF38AQ8NAV1 312 aaKnown RBP14.24□□□□□ -0.13
CSF1R-208ENST00000515239 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.24□□□□□ -0.13
CSF1R-208ENST00000515239 KCNH6Q9H252 994 aa14.24□□□□□ -0.13
CSF1R-208ENST00000515239 RAVER2Q9HCJ3 691 aaKnown RBP14.24□□□□□ -0.13
CSF1R-208ENST00000515239 TNNQ9UQP3 1299 aa14.24□□□□□ -0.13
CSF1R-208ENST00000515239 GTF3C3Q9Y5Q9 886 aa14.24□□□□□ -0.13
CSF1R-208ENST00000515239 KIF28PB7ZC32 967 aa14.23□□□□□ -0.13
CSF1R-208ENST00000515239 LEXMQ3ZCV2 418 aa14.23□□□□□ -0.13
CSF1R-208ENST00000515239 TMEM63BQ5T3F8 832 aa14.23□□□□□ -0.13
CSF1R-208ENST00000515239 C16orf86Q6ZW13 317 aa14.23□□□□□ -0.13
CSF1R-208ENST00000515239 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.23□□□□□ -0.13
CSF1R-208ENST00000515239 AP5M1Q9H0R1 490 aa14.23□□□□□ -0.13
CSF1R-208ENST00000515239 UBE2ZQ9H832 354 aaPredicted RBP14.23□□□□□ -0.13
CSF1R-208ENST00000515239 ARMT1Q9H993 441 aa14.23□□□□□ -0.13
CSF1R-208ENST00000515239 TRMT13Q9NUP7 481 aaKnown RBP14.23□□□□□ -0.13
CSF1R-208ENST00000515239 SCN5AQ14524 2016 aa14.22□□□□□ -0.13
CSF1R-208ENST00000515239 MYH8P13535 1937 aa14.22□□□□□ -0.13
CSF1R-208ENST00000515239 POTEB3A0JP26 581 aa14.22□□□□□ -0.13
CSF1R-208ENST00000515239 USP17L12C9JPN9 530 aa14.22□□□□□ -0.13
CSF1R-208ENST00000515239 USP17L21D6R901 530 aa14.22□□□□□ -0.13
CSF1R-208ENST00000515239 F5H6K3 240 aa14.22□□□□□ -0.13
CSF1R-208ENST00000515239 ZEB2O60315 1214 aa14.22□□□□□ -0.13
CSF1R-208ENST00000515239 ZBED4O75132 1171 aa14.22□□□□□ -0.13
CSF1R-208ENST00000515239 SUPT20HL2P0C7V6 817 aa14.22□□□□□ -0.13
CSF1R-208ENST00000515239 ACTN1P12814 892 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms