RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 RRP36Q96EU6 259 aaKnown RBP11.37□□□□□ -0.59
TPM3-221ENST00000513769 MTRQ99707 1265 aa11.37□□□□□ -0.59
TPM3-221ENST00000513769 GLT8D2Q9H1C3 349 aa11.37□□□□□ -0.59
TPM3-221ENST00000513769 GPRC5DQ9NZD1 345 aa11.37□□□□□ -0.59
TPM3-221ENST00000513769 TFIP11Q9UBB9 837 aaKnown RBP11.37□□□□□ -0.59
TPM3-221ENST00000513769 CNPY2Q9Y2B0 182 aa11.37□□□□□ -0.59
TPM3-221ENST00000513769 DDX60LQ5H9U9 1706 aaKnown RBP11.37□□□□□ -0.59
TPM3-221ENST00000513769 COL4A5P29400 1685 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 WDR90Q96KV7 1748 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 MPHOSPH10O00566 681 aaKnown RBP11.36□□□□□ -0.59
TPM3-221ENST00000513769 CTNND1O60716 968 aaKnown RBP11.36□□□□□ -0.59
TPM3-221ENST00000513769 PLA2G6O60733 806 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 PPP6R2O75170 966 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 BMP15O95972 392 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 ASNSP08243 561 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 GNA11P29992 359 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 CAP2P40123 477 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 TRAPPC10P48553 1259 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 NASPP49321 788 aaPredicted RBP11.36□□□□□ -0.59
TPM3-221ENST00000513769 PRELPP51888 382 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 RASA3Q14644 834 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 SLC39A14Q15043 492 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 MYSM1Q5VVJ2 828 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 DCAF15Q66K64 600 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 MCTP2Q6DN12 878 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 SIAH1Q8IUQ4 282 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 NOSTRINQ8IVI9 506 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 LEO1Q8WVC0 666 aaPredicted RBP11.36□□□□□ -0.59
TPM3-221ENST00000513769 GMCL1Q96IK5 515 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 SH2D4AQ9H788 454 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 DNAJC18Q9H819 358 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 ARHGEF10LQ9HCE6 1279 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 CEP131Q9UPN4 1083 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 GJA3Q9Y6H8 435 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 CNTNAP1P78357 1384 aa11.36□□□□□ -0.59
TPM3-221ENST00000513769 PITPNM2Q9BZ72 1349 aa11.35□□□□□ -0.59
TPM3-221ENST00000513769 CLRN2A0PK11 232 aa11.35□□□□□ -0.59
TPM3-221ENST00000513769 PLEKHA8P1O95397 391 aa11.35□□□□□ -0.59
TPM3-221ENST00000513769 EEF2P13639 858 aaKnown RBP11.35□□□□□ -0.59
TPM3-221ENST00000513769 GUCY1A2P33402 732 aa11.35□□□□□ -0.59
TPM3-221ENST00000513769 KRT2P35908 639 aa11.35□□□□□ -0.59
TPM3-221ENST00000513769 RASSF7Q02833 373 aa11.35□□□□□ -0.59
TPM3-221ENST00000513769 ZNF543Q08ER8 600 aa11.35□□□□□ -0.59
TPM3-221ENST00000513769 SUPT20HL1Q3ZLR7 823 aa11.35□□□□□ -0.59
TPM3-221ENST00000513769 STAG2Q8N3U4 1231 aa11.35□□□□□ -0.59
TPM3-221ENST00000513769 DAGLBQ8NCG7 672 aa11.35□□□□□ -0.59
TPM3-221ENST00000513769 LINC00301Q8NCQ3 95 aa11.35□□□□□ -0.59
TPM3-221ENST00000513769 BICD2Q8TD16 824 aa11.35□□□□□ -0.59
TPM3-221ENST00000513769 ZC3H15Q8WU90 426 aaKnown RBP11.35□□□□□ -0.59
TPM3-221ENST00000513769 DEFB129Q9H1M3 183 aa11.35□□□□□ -0.59
TPM3-221ENST00000513769 VEZTQ9HBM0 779 aa11.35□□□□□ -0.59
TPM3-221ENST00000513769 BARHL2Q9NY43 387 aa11.35□□□□□ -0.59
TPM3-221ENST00000513769 TMX2Q9Y320 296 aa11.35□□□□□ -0.59
TPM3-221ENST00000513769 CNTNAP5Q8WYK1 1306 aa11.35□□□□□ -0.59
TPM3-221ENST00000513769 PNMA6FA0A0J9YX94 578 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 A0A1W2PQ27 194 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 A0A1W2PQ64 194 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 A0A1W2PQD8 194 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 ESYT2A0FGR8 921 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 USP17L5A8MUK1 530 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 BTBD18B2RXH4 712 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 F5H6K3 240 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 CYTH3O43739 400 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 VEGFAP15692 232 aaPredicted RBP11.34□□□□□ -0.59
TPM3-221ENST00000513769 NLRP5P59047 1200 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 GUCY1B3Q02153 619 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 KLRC3Q07444 240 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 KIF4BQ2VIQ3 1234 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 ANO1Q5XXA6 986 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 USP17L2Q6R6M4 530 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 BTNL9Q6UXG8 535 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 DIS3L2Q8IYB7 885 aaKnown RBP11.34□□□□□ -0.59
TPM3-221ENST00000513769 CMTR1Q8N1G2 835 aaKnown RBP11.34□□□□□ -0.59
TPM3-221ENST00000513769 GPT2Q8TD30 523 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 MTMR8Q96EF0 704 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 TEPSINQ96N21 525 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 ZMYND12Q9H0C1 365 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 IL21Q9HBE4 155 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 C6orf50Q9HD87 102 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 SEC63Q9UGP8 760 aaKnown RBP11.34□□□□□ -0.59
TPM3-221ENST00000513769 ZNF112Q9UJU3 913 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 ADGRG1Q9Y653 693 aa11.34□□□□□ -0.59
TPM3-221ENST00000513769 DICER1Q9UPY3 1922 aaKnown RBP11.33□□□□□ -0.6
TPM3-221ENST00000513769 GLTPD2A6NH11 291 aa11.33□□□□□ -0.6
TPM3-221ENST00000513769 PHF20L1A8MW92 1017 aa11.33□□□□□ -0.6
TPM3-221ENST00000513769 SPTLC2O15270 562 aa11.33□□□□□ -0.6
TPM3-221ENST00000513769 FIBPO43427 364 aa11.33□□□□□ -0.6
TPM3-221ENST00000513769 GH2P01242 217 aa11.33□□□□□ -0.6
TPM3-221ENST00000513769 LMOD1P29536 600 aaPredicted RBP11.33□□□□□ -0.6
TPM3-221ENST00000513769 SLC1A4P43007 532 aa11.33□□□□□ -0.6
TPM3-221ENST00000513769 ZNF445P59923 1031 aa11.33□□□□□ -0.6
TPM3-221ENST00000513769 ICA1Q05084 483 aa11.33□□□□□ -0.6
TPM3-221ENST00000513769 SEPT2Q15019 361 aa11.33□□□□□ -0.6
TPM3-221ENST00000513769 SF3A1Q15459 793 aaKnown RBP11.33□□□□□ -0.6
TPM3-221ENST00000513769 SLFN13Q68D06 897 aa11.33□□□□□ -0.6
TPM3-221ENST00000513769 OTUD7BQ6GQQ9 843 aa11.33□□□□□ -0.6
TPM3-221ENST00000513769 CHURC1Q8WUH1 139 aa11.33□□□□□ -0.6
TPM3-221ENST00000513769 AIFM3Q96NN9 605 aa11.33□□□□□ -0.6
TPM3-221ENST00000513769 USP28Q96RU2 1077 aa11.33□□□□□ -0.6
TPM3-221ENST00000513769 IRX2Q9BZI1 471 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms