RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 BADQ92934 168 aa13.02□□□□□ -0.33
SKP2-207ENST00000513263 NUP88Q99567 741 aaPredicted RBP13.02□□□□□ -0.33
SKP2-207ENST00000513263 TMEM39AQ9NV64 488 aa13.02□□□□□ -0.33
SKP2-207ENST00000513263 ISY1Q9ULR0 285 aaKnown RBP13.02□□□□□ -0.33
SKP2-207ENST00000513263 NCOR1O75376 2440 aa13.02□□□□□ -0.33
SKP2-207ENST00000513263 LOC102724159A0A0B4J2E5 919 aa13.01□□□□□ -0.33
SKP2-207ENST00000513263 ASB14A6NK59 587 aa13.01□□□□□ -0.33
SKP2-207ENST00000513263 TLR3O15455 904 aaKnown RBP13.01□□□□□ -0.33
SKP2-207ENST00000513263 PRDM1O75626 825 aa13.01□□□□□ -0.33
SKP2-207ENST00000513263 CHGBP05060 677 aa13.01□□□□□ -0.33
SKP2-207ENST00000513263 ACVR2BQ13705 512 aa13.01□□□□□ -0.33
SKP2-207ENST00000513263 PWP2Q15269 919 aaKnown RBP13.01□□□□□ -0.33
SKP2-207ENST00000513263 ZMYM1Q5SVZ6 1142 aa13.01□□□□□ -0.33
SKP2-207ENST00000513263 CCDC129Q6ZRS4 1044 aa13.01□□□□□ -0.33
SKP2-207ENST00000513263 LRRC47Q8N1G4 583 aaKnown RBP13.01□□□□□ -0.33
SKP2-207ENST00000513263 RNPC3Q96LT9 517 aaKnown RBP13.01□□□□□ -0.33
SKP2-207ENST00000513263 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.01□□□□□ -0.33
SKP2-207ENST00000513263 STX8Q9UNK0 236 aa13.01□□□□□ -0.33
SKP2-207ENST00000513263 TTC28Q96AY4 2481 aa13.01□□□□□ -0.33
SKP2-207ENST00000513263 ZMYM6O95789 1325 aa13□□□□□ -0.33
SKP2-207ENST00000513263 A0A0U1RQG5 324 aaPredicted RBP13□□□□□ -0.33
SKP2-207ENST00000513263 TRIM43BA6NCK2 446 aa13□□□□□ -0.33
SKP2-207ENST00000513263 TSPY2A6NKD2 308 aa13□□□□□ -0.33
SKP2-207ENST00000513263 SMIM22K7EJ46 135 aa13□□□□□ -0.33
SKP2-207ENST00000513263 ZEB2O60315 1214 aa13□□□□□ -0.33
SKP2-207ENST00000513263 CABYRO75952 493 aa13□□□□□ -0.33
SKP2-207ENST00000513263 C6orf222P0C671 652 aaPredicted RBP13□□□□□ -0.33
SKP2-207ENST00000513263 GJA9P57773 515 aa13□□□□□ -0.33
SKP2-207ENST00000513263 TFAP4Q01664 338 aa13□□□□□ -0.33
SKP2-207ENST00000513263 AAMPQ13685 434 aa13□□□□□ -0.33
SKP2-207ENST00000513263 SHHQ15465 462 aa13□□□□□ -0.33
SKP2-207ENST00000513263 RCSD1Q6JBY9 416 aa13□□□□□ -0.33
SKP2-207ENST00000513263 ARMCX2Q7L311 632 aa13□□□□□ -0.33
SKP2-207ENST00000513263 KLHDC9Q8NEP7 349 aa13□□□□□ -0.33
SKP2-207ENST00000513263 PI4K2BQ8TCG2 481 aa13□□□□□ -0.33
SKP2-207ENST00000513263 STAG1Q8WVM7 1258 aa13□□□□□ -0.33
SKP2-207ENST00000513263 TRIM43Q96BQ3 446 aaPredicted RBP13□□□□□ -0.33
SKP2-207ENST00000513263 GUCD1Q96NT3 240 aa13□□□□□ -0.33
SKP2-207ENST00000513263 UPF3AQ9H1J1 476 aaKnown RBP13□□□□□ -0.33
SKP2-207ENST00000513263 MTIF3Q9H2K0 278 aaKnown RBP13□□□□□ -0.33
SKP2-207ENST00000513263 RAVER2Q9HCJ3 691 aaKnown RBP13□□□□□ -0.33
SKP2-207ENST00000513263 TMEM232C9JQI7 657 aa12.99□□□□□ -0.33
SKP2-207ENST00000513263 SNAI1O95863 264 aaPredicted RBP12.99□□□□□ -0.33
SKP2-207ENST00000513263 PCP11498 1178 aaKnown RBP12.99□□□□□ -0.33
SKP2-207ENST00000513263 TAL1P17542 331 aaPredicted RBP12.99□□□□□ -0.33
SKP2-207ENST00000513263 PPIGQ13427 754 aaKnown RBP eCLIP12.99□□□□□ -0.33
SKP2-207ENST00000513263 CCDC144BQ3MJ40 725 aa12.99□□□□□ -0.33
SKP2-207ENST00000513263 TSHZ3Q63HK5 1081 aa12.99□□□□□ -0.33
SKP2-207ENST00000513263 PSRC1Q6PGN9 363 aaPredicted RBP12.99□□□□□ -0.33
SKP2-207ENST00000513263 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.99□□□□□ -0.33
SKP2-207ENST00000513263 STK11IPQ8N1F8 1099 aa12.99□□□□□ -0.33
SKP2-207ENST00000513263 EVI5LQ96CN4 794 aa12.99□□□□□ -0.33
SKP2-207ENST00000513263 MPHOSPH6Q99547 160 aaKnown RBP12.99□□□□□ -0.33
SKP2-207ENST00000513263 RNF146Q9NTX7 359 aa12.99□□□□□ -0.33
SKP2-207ENST00000513263 RIPK3Q9Y572 518 aa12.99□□□□□ -0.33
SKP2-207ENST00000513263 GBF1Q92538 1859 aa12.99□□□□□ -0.33
SKP2-207ENST00000513263 MUC3AQ02505 3323 aa12.98□□□□□ -0.33
SKP2-207ENST00000513263 SPTBN5Q9NRC6 3674 aaKnown RBP12.98□□□□□ -0.33
SKP2-207ENST00000513263 TIMP1P01033 207 aa12.98□□□□□ -0.33
SKP2-207ENST00000513263 SLC4A3P48751 1232 aa12.98□□□□□ -0.33
SKP2-207ENST00000513263 NKX3-2P78367 333 aa12.98□□□□□ -0.33
SKP2-207ENST00000513263 KCNA10Q16322 511 aa12.98□□□□□ -0.33
SKP2-207ENST00000513263 CCDC144CPQ8IYA2 1237 aa12.98□□□□□ -0.33
SKP2-207ENST00000513263 TMEM199Q8N511 208 aa12.98□□□□□ -0.33
SKP2-207ENST00000513263 FAM133AQ8N9E0 248 aa12.98□□□□□ -0.33
SKP2-207ENST00000513263 DCAF4Q8WV16 495 aa12.98□□□□□ -0.33
SKP2-207ENST00000513263 HELLSQ9NRZ9 838 aa12.98□□□□□ -0.33
SKP2-207ENST00000513263 HOMER2Q9NSB8 354 aa12.98□□□□□ -0.33
SKP2-207ENST00000513263 ADD3Q9UEY8 706 aaKnown RBP12.98□□□□□ -0.33
SKP2-207ENST00000513263 ANAPC4Q9UJX5 808 aa12.98□□□□□ -0.33
SKP2-207ENST00000513263 TANC1Q9C0D5 1861 aa12.97□□□□□ -0.33
SKP2-207ENST00000513263 ORC4O43929 436 aa12.97□□□□□ -0.33
SKP2-207ENST00000513263 ASGR1P07306 291 aa12.97□□□□□ -0.33
SKP2-207ENST00000513263 MFAP1P55081 439 aaKnown RBP12.97□□□□□ -0.33
SKP2-207ENST00000513263 FAAP100Q0VG06 881 aa12.97□□□□□ -0.33
SKP2-207ENST00000513263 GNASQ5JWF2 1037 aa12.97□□□□□ -0.33
SKP2-207ENST00000513263 C9orf50Q5SZB4 431 aa12.97□□□□□ -0.33
SKP2-207ENST00000513263 CCSAPQ6IQ19 270 aaPredicted RBP12.97□□□□□ -0.33
SKP2-207ENST00000513263 MFSD5Q6N075 450 aa12.97□□□□□ -0.33
SKP2-207ENST00000513263 SH3RF1Q7Z6J0 888 aa12.97□□□□□ -0.33
SKP2-207ENST00000513263 VTA1Q9NP79 307 aa12.97□□□□□ -0.33
SKP2-207ENST00000513263 TBX21Q9UL17 535 aa12.97□□□□□ -0.33
SKP2-207ENST00000513263 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.97□□□□□ -0.33
SKP2-207ENST00000513263 Q9Y3F1 56 aa12.97□□□□□ -0.33
SKP2-207ENST00000513263 KIAA1217Q5T5P2 1943 aa12.96□□□□□ -0.33
SKP2-207ENST00000513263 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.96□□□□□ -0.33
SKP2-207ENST00000513263 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.96□□□□□ -0.33
SKP2-207ENST00000513263 ARVCFO00192 962 aa12.96□□□□□ -0.33
SKP2-207ENST00000513263 FOSL2P15408 326 aa12.96□□□□□ -0.33
SKP2-207ENST00000513263 TNFAIP2Q03169 654 aa12.96□□□□□ -0.33
SKP2-207ENST00000513263 ALX1Q15699 326 aa12.96□□□□□ -0.33
SKP2-207ENST00000513263 TLK2Q86UE8 772 aa12.96□□□□□ -0.33
SKP2-207ENST00000513263 VTI1AQ96AJ9 217 aa12.96□□□□□ -0.33
SKP2-207ENST00000513263 LENG1Q96BZ8 264 aaPredicted RBP12.96□□□□□ -0.33
SKP2-207ENST00000513263 TRERF1Q96PN7 1200 aa12.96□□□□□ -0.33
SKP2-207ENST00000513263 AP5M1Q9H0R1 490 aa12.96□□□□□ -0.33
SKP2-207ENST00000513263 SEMA6BQ9H3T3 888 aa12.96□□□□□ -0.33
SKP2-207ENST00000513263 A1CFQ9NQ94 594 aaKnown RBP12.96□□□□□ -0.33
SKP2-207ENST00000513263 SCN10AQ9Y5Y9 1956 aa12.96□□□□□ -0.34
SKP2-207ENST00000513263 RAD50Q92878 1312 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms