RNA–Protein interactions for RNA: ENST00000513080.5

SPOP-218, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 4

Gene SPOP, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-218ENST00000513080 CHST13Q8NET6 341 aa17.11■□□□□ 0.33
SPOP-218ENST00000513080 FBXO40Q9UH90 709 aa17.11■□□□□ 0.33
SPOP-218ENST00000513080 DIS3Q9Y2L1 958 aaKnown RBP17.11■□□□□ 0.33
SPOP-218ENST00000513080 TAF6LQ9Y6J9 622 aa17.11■□□□□ 0.33
SPOP-218ENST00000513080 E7EWF7 191 aa17.1■□□□□ 0.33
SPOP-218ENST00000513080 CNGA1P29973 690 aa17.1■□□□□ 0.33
SPOP-218ENST00000513080 SYDE2Q5VT97 1194 aa17.1■□□□□ 0.33
SPOP-218ENST00000513080 ANKRD35Q8N283 1001 aa17.1■□□□□ 0.33
SPOP-218ENST00000513080 TRPV1Q8NER1 839 aa17.1■□□□□ 0.33
SPOP-218ENST00000513080 LSG1Q9H089 658 aaKnown RBP17.1■□□□□ 0.33
SPOP-218ENST00000513080 RANBP17Q9H2T7 1088 aaKnown RBP17.1■□□□□ 0.33
SPOP-218ENST00000513080 HOMER2Q9NSB8 354 aa17.1■□□□□ 0.33
SPOP-218ENST00000513080 ALAS1P13196 640 aa17.09■□□□□ 0.33
SPOP-218ENST00000513080 LHX8Q68G74 356 aa17.09■□□□□ 0.33
SPOP-218ENST00000513080 STOX1Q6ZVD7 989 aa17.09■□□□□ 0.33
SPOP-218ENST00000513080 RALYLQ86SE5 291 aaKnown RBP17.09■□□□□ 0.33
SPOP-218ENST00000513080 NCOA7Q8NI08 942 aa17.09■□□□□ 0.33
SPOP-218ENST00000513080 ANO2Q9NQ90 1003 aa17.09■□□□□ 0.33
SPOP-218ENST00000513080 RNF146Q9NTX7 359 aa17.09■□□□□ 0.33
SPOP-218ENST00000513080 OGDHLQ9ULD0 1010 aa17.09■□□□□ 0.33
SPOP-218ENST00000513080 PDE4DIPQ5VU43 2346 aa17.08■□□□□ 0.33
SPOP-218ENST00000513080 DNAJC25-GNG10A0A024R161 153 aa17.08■□□□□ 0.32
SPOP-218ENST00000513080 GOLGA8HP0CJ92 632 aa17.08■□□□□ 0.32
SPOP-218ENST00000513080 CYBAP13498 195 aa17.08■□□□□ 0.32
SPOP-218ENST00000513080 KCNA4P22459 653 aa17.08■□□□□ 0.32
SPOP-218ENST00000513080 SEC23AQ15436 765 aa17.08■□□□□ 0.32
SPOP-218ENST00000513080 TKFCQ3LXA3 575 aa17.08■□□□□ 0.32
SPOP-218ENST00000513080 PRAMEF19Q5SWL8 479 aa17.08■□□□□ 0.32
SPOP-218ENST00000513080 GPATCH4Q5T3I0 446 aaKnown RBP17.08■□□□□ 0.32
SPOP-218ENST00000513080 IFIT1BQ5T764 474 aaKnown RBP17.08■□□□□ 0.32
SPOP-218ENST00000513080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.08■□□□□ 0.32
SPOP-218ENST00000513080 ANKLE1Q8NAG6 615 aa17.08■□□□□ 0.32
SPOP-218ENST00000513080 TRERF1Q96PN7 1200 aa17.08■□□□□ 0.32
SPOP-218ENST00000513080 TINF2Q9BSI4 451 aa17.08■□□□□ 0.32
SPOP-218ENST00000513080 ACAD9Q9H845 621 aa17.08■□□□□ 0.32
SPOP-218ENST00000513080 DDX20Q9UHI6 824 aaKnown RBP17.08■□□□□ 0.32
SPOP-218ENST00000513080 CCPG1Q9ULG6 757 aa17.08■□□□□ 0.32
SPOP-218ENST00000513080 FRMPD3Q5JV73 1810 aa17.07■□□□□ 0.32
SPOP-218ENST00000513080 CDC45O75419 566 aa17.07■□□□□ 0.32
SPOP-218ENST00000513080 ICAM1P05362 532 aa17.07■□□□□ 0.32
SPOP-218ENST00000513080 CASC1Q6TDU7 716 aa17.07■□□□□ 0.32
SPOP-218ENST00000513080 DIS3LQ8TF46 1054 aaKnown RBP17.07■□□□□ 0.32
SPOP-218ENST00000513080 PAWRQ96IZ0 340 aaKnown RBP17.07■□□□□ 0.32
SPOP-218ENST00000513080 UBA5Q9GZZ9 404 aa17.07■□□□□ 0.32
SPOP-218ENST00000513080 SMCHD1A6NHR9 2005 aa17.07■□□□□ 0.32
SPOP-218ENST00000513080 IFIT3O14879 490 aaKnown RBP17.06■□□□□ 0.32
SPOP-218ENST00000513080 MSCO60682 206 aa17.06■□□□□ 0.32
SPOP-218ENST00000513080 TAL1P17542 331 aaPredicted RBP17.06■□□□□ 0.32
SPOP-218ENST00000513080 NECTIN1Q15223 517 aa17.06■□□□□ 0.32
SPOP-218ENST00000513080 CHST3Q7LGC8 479 aa17.06■□□□□ 0.32
SPOP-218ENST00000513080 NECAB2Q7Z6G3 386 aa17.06■□□□□ 0.32
SPOP-218ENST00000513080 HTATIP2Q9BUP3 242 aa17.06■□□□□ 0.32
SPOP-218ENST00000513080 CPVLQ9H3G5 476 aa17.06■□□□□ 0.32
SPOP-218ENST00000513080 A1CFQ9NQ94 594 aaKnown RBP17.06■□□□□ 0.32
SPOP-218ENST00000513080 PPP4R2Q9NY27 417 aa17.06■□□□□ 0.32
SPOP-218ENST00000513080 ERICH2A1L162 156 aa17.05■□□□□ 0.32
SPOP-218ENST00000513080 SLC27A2O14975 620 aa17.05■□□□□ 0.32
SPOP-218ENST00000513080 SEPT4O43236 478 aa17.05■□□□□ 0.32
SPOP-218ENST00000513080 PARP1P09874 1014 aaKnown RBP17.05■□□□□ 0.32
SPOP-218ENST00000513080 MNX1P50219 401 aaPredicted RBP17.05■□□□□ 0.32
SPOP-218ENST00000513080 ASPRV1Q53RT3 343 aa17.05■□□□□ 0.32
SPOP-218ENST00000513080 MUM1L1Q5H9M0 696 aa17.05■□□□□ 0.32
SPOP-218ENST00000513080 PRPF38BQ5VTL8 546 aaKnown RBP17.05■□□□□ 0.32
SPOP-218ENST00000513080 ERICH6BQ5W0A0 696 aa17.05■□□□□ 0.32
SPOP-218ENST00000513080 CREB3L3Q68CJ9 461 aa17.05■□□□□ 0.32
SPOP-218ENST00000513080 MB21D2Q8IYB1 491 aaPredicted RBP17.05■□□□□ 0.32
SPOP-218ENST00000513080 MSL3Q8N5Y2 521 aaKnown RBP17.05■□□□□ 0.32
SPOP-218ENST00000513080 DPF3Q92784 378 aa17.05■□□□□ 0.32
SPOP-218ENST00000513080 MKI67P46013 3256 aaKnown RBP17.05■□□□□ 0.32
SPOP-218ENST00000513080 POTEB2H3BUK9 544 aa17.04■□□□□ 0.32
SPOP-218ENST00000513080 ANTXR2P58335 489 aa17.04■□□□□ 0.32
SPOP-218ENST00000513080 CNTN2Q02246 1040 aa17.04■□□□□ 0.32
SPOP-218ENST00000513080 WTAPQ15007 396 aa17.04■□□□□ 0.32
SPOP-218ENST00000513080 SART3Q15020 963 aaKnown RBP17.04■□□□□ 0.32
SPOP-218ENST00000513080 ANO1Q5XXA6 986 aa17.04■□□□□ 0.32
SPOP-218ENST00000513080 MAMDC4Q6UXC1 1216 aa17.04■□□□□ 0.32
SPOP-218ENST00000513080 ZNF467Q7Z7K2 595 aaPredicted RBP17.04■□□□□ 0.32
SPOP-218ENST00000513080 NRBP1Q9UHY1 535 aa17.04■□□□□ 0.32
SPOP-218ENST00000513080 PNMA2Q9UL42 364 aa17.04■□□□□ 0.32
SPOP-218ENST00000513080 CNPY2Q9Y2B0 182 aa17.04■□□□□ 0.32
SPOP-218ENST00000513080 PFASO15067 1338 aa17.03■□□□□ 0.32
SPOP-218ENST00000513080 SYNGAP1Q96PV0 1343 aa17.03■□□□□ 0.32
SPOP-218ENST00000513080 TMEM67Q5HYA8 995 aa17.03■□□□□ 0.32
SPOP-218ENST00000513080 NSMFQ6X4W1 530 aa17.03■□□□□ 0.32
SPOP-218ENST00000513080 ADGRF4Q8IZF3 695 aa17.03■□□□□ 0.32
SPOP-218ENST00000513080 FAM133AQ8N9E0 248 aa17.03■□□□□ 0.32
SPOP-218ENST00000513080 FGD4Q96M96 766 aa17.03■□□□□ 0.32
SPOP-218ENST00000513080 C11orf49Q9H6J7 331 aa17.03■□□□□ 0.32
SPOP-218ENST00000513080 SENP2Q9HC62 589 aa17.03■□□□□ 0.32
SPOP-218ENST00000513080 CYP39A1Q9NYL5 469 aa17.03■□□□□ 0.32
SPOP-218ENST00000513080 WDR19Q8NEZ3 1342 aa17.02■□□□□ 0.32
SPOP-218ENST00000513080 DHX16O60231 1041 aaKnown RBP17.02■□□□□ 0.32
SPOP-218ENST00000513080 SNAI1O95863 264 aaPredicted RBP17.02■□□□□ 0.32
SPOP-218ENST00000513080 ZNF865P0CJ78 1059 aaPredicted RBP17.02■□□□□ 0.32
SPOP-218ENST00000513080 STAG2Q8N3U4 1231 aa17.02■□□□□ 0.32
SPOP-218ENST00000513080 IGDCC4Q8TDY8 1250 aa17.02■□□□□ 0.32
SPOP-218ENST00000513080 VAT1LQ9HCJ6 419 aa17.02■□□□□ 0.32
SPOP-218ENST00000513080 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.02■□□□□ 0.32
SPOP-218ENST00000513080 MCM3APO60318 1980 aa17.02■□□□□ 0.31
SPOP-218ENST00000513080 PALM3A6NDB9 673 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms