RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 CYP2D7A0A087X1C5 515 aa12.54□□□□□ -0.4
PFDN1-205ENST00000512925 A0A0U1RQG5 324 aaPredicted RBP12.54□□□□□ -0.4
PFDN1-205ENST00000512925 FGBP02675 491 aa12.54□□□□□ -0.4
PFDN1-205ENST00000512925 CDK8P49336 464 aa12.54□□□□□ -0.4
PFDN1-205ENST00000512925 NKX3-2P78367 333 aa12.54□□□□□ -0.4
PFDN1-205ENST00000512925 ACVR2BQ13705 512 aa12.54□□□□□ -0.4
PFDN1-205ENST00000512925 CCDC144BQ3MJ40 725 aa12.54□□□□□ -0.4
PFDN1-205ENST00000512925 FAM83BQ5T0W9 1011 aa12.54□□□□□ -0.4
PFDN1-205ENST00000512925 C12orf60Q5U649 245 aa12.54□□□□□ -0.4
PFDN1-205ENST00000512925 ZNF467Q7Z7K2 595 aaPredicted RBP12.54□□□□□ -0.4
PFDN1-205ENST00000512925 SLC43A3Q8NBI5 491 aa12.54□□□□□ -0.4
PFDN1-205ENST00000512925 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.54□□□□□ -0.4
PFDN1-205ENST00000512925 ARIH1Q9Y4X5 557 aaPredicted RBP12.54□□□□□ -0.4
PFDN1-205ENST00000512925 UMODL1Q5DID0 1318 aa12.54□□□□□ -0.4
PFDN1-205ENST00000512925 COL11A1P12107 1806 aaPredicted RBP12.53□□□□□ -0.4
PFDN1-205ENST00000512925 NAV1Q8NEY1 1877 aa12.53□□□□□ -0.4
PFDN1-205ENST00000512925 TRANK1O15050 2925 aa12.53□□□□□ -0.4
PFDN1-205ENST00000512925 MYOGP15173 224 aa12.53□□□□□ -0.4
PFDN1-205ENST00000512925 KCNQ1P51787 676 aa12.53□□□□□ -0.4
PFDN1-205ENST00000512925 RABGGTBP53611 331 aa12.53□□□□□ -0.4
PFDN1-205ENST00000512925 TTF1Q15361 905 aaPredicted RBP12.53□□□□□ -0.4
PFDN1-205ENST00000512925 SLFNL1Q499Z3 407 aa12.53□□□□□ -0.4
PFDN1-205ENST00000512925 GNASQ5JWF2 1037 aa12.53□□□□□ -0.4
PFDN1-205ENST00000512925 OTOP2Q7RTS6 562 aa12.53□□□□□ -0.4
PFDN1-205ENST00000512925 AACSQ86V21 672 aa12.53□□□□□ -0.4
PFDN1-205ENST00000512925 IL27Q8NEV9 243 aa12.53□□□□□ -0.4
PFDN1-205ENST00000512925 VTI1AQ96AJ9 217 aa12.53□□□□□ -0.4
PFDN1-205ENST00000512925 DDX11Q96FC9 970 aa12.53□□□□□ -0.4
PFDN1-205ENST00000512925 TEX13BQ9BXU2 312 aa12.53□□□□□ -0.4
PFDN1-205ENST00000512925 KATNBL1Q9H079 304 aa12.53□□□□□ -0.4
PFDN1-205ENST00000512925 EPHX3Q9H6B9 360 aa12.53□□□□□ -0.4
PFDN1-205ENST00000512925 ARMT1Q9H993 441 aa12.53□□□□□ -0.4
PFDN1-205ENST00000512925 KANSL2Q9H9L4 492 aa12.53□□□□□ -0.4
PFDN1-205ENST00000512925 BMP2KQ9NSY1 1161 aaPredicted RBP12.53□□□□□ -0.4
PFDN1-205ENST00000512925 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.53□□□□□ -0.4
PFDN1-205ENST00000512925 TLR3O15455 904 aaKnown RBP12.52□□□□□ -0.41
PFDN1-205ENST00000512925 SNRNP48Q6IEG0 339 aaKnown RBP12.52□□□□□ -0.41
PFDN1-205ENST00000512925 C16orf86Q6ZW13 317 aa12.52□□□□□ -0.41
PFDN1-205ENST00000512925 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.52□□□□□ -0.41
PFDN1-205ENST00000512925 LRFN3Q9BTN0 628 aa12.52□□□□□ -0.41
PFDN1-205ENST00000512925 ABHD16BQ9H3Z7 469 aa12.52□□□□□ -0.41
PFDN1-205ENST00000512925 ATP8A2Q9NTI2 1148 aa12.52□□□□□ -0.41
PFDN1-205ENST00000512925 GRIN2DO15399 1336 aa12.52□□□□□ -0.41
PFDN1-205ENST00000512925 USP17L12C9JPN9 530 aa12.51□□□□□ -0.41
PFDN1-205ENST00000512925 USP17L21D6R901 530 aa12.51□□□□□ -0.41
PFDN1-205ENST00000512925 APBB1O00213 710 aa12.51□□□□□ -0.41
PFDN1-205ENST00000512925 ATP2A1O14983 1001 aa12.51□□□□□ -0.41
PFDN1-205ENST00000512925 ERC2O15083 957 aa12.51□□□□□ -0.41
PFDN1-205ENST00000512925 POU3F3P20264 500 aaPredicted RBP12.51□□□□□ -0.41
PFDN1-205ENST00000512925 BEX3Q00994 111 aa12.51□□□□□ -0.41
PFDN1-205ENST00000512925 NUP88Q99567 741 aaPredicted RBP12.51□□□□□ -0.41
PFDN1-205ENST00000512925 SLF1Q9BQI6 1058 aa12.51□□□□□ -0.41
PFDN1-205ENST00000512925 WNT8AQ9H1J5 351 aa12.51□□□□□ -0.41
PFDN1-205ENST00000512925 HIPK3Q9H422 1215 aa12.51□□□□□ -0.41
PFDN1-205ENST00000512925 SPC25Q9HBM1 224 aa12.51□□□□□ -0.41
PFDN1-205ENST00000512925 GOPCQ9HD26 462 aa12.51□□□□□ -0.41
PFDN1-205ENST00000512925 EXOC6BQ9Y2D4 811 aa12.51□□□□□ -0.41
PFDN1-205ENST00000512925 ASTN1O14525 1302 aa12.51□□□□□ -0.41
PFDN1-205ENST00000512925 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.5□□□□□ -0.41
PFDN1-205ENST00000512925 RFXAPO00287 272 aa12.5□□□□□ -0.41
PFDN1-205ENST00000512925 GOLIM4O00461 696 aa12.5□□□□□ -0.41
PFDN1-205ENST00000512925 CHGBP05060 677 aa12.5□□□□□ -0.41
PFDN1-205ENST00000512925 CCL23P55773 120 aa12.5□□□□□ -0.41
PFDN1-205ENST00000512925 HNRNPUQ00839 825 aaKnown RBP eCLIP12.5□□□□□ -0.41
PFDN1-205ENST00000512925 ZKSCAN2Q63HK3 967 aa12.5□□□□□ -0.41
PFDN1-205ENST00000512925 PPP2R2DQ66LE6 453 aa12.5□□□□□ -0.41
PFDN1-205ENST00000512925 CXCL17Q6UXB2 119 aa12.5□□□□□ -0.41
PFDN1-205ENST00000512925 ARMCX2Q7L311 632 aa12.5□□□□□ -0.41
PFDN1-205ENST00000512925 MICALL1Q8N3F8 863 aa12.5□□□□□ -0.41
PFDN1-205ENST00000512925 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.5□□□□□ -0.41
PFDN1-205ENST00000512925 NOC4LQ9BVI4 516 aaKnown RBP12.5□□□□□ -0.41
PFDN1-205ENST00000512925 MTIF3Q9H2K0 278 aaKnown RBP12.5□□□□□ -0.41
PFDN1-205ENST00000512925 IL1RAPL2Q9NP60 686 aa12.5□□□□□ -0.41
PFDN1-205ENST00000512925 PCDHA11Q9Y5I1 949 aa12.5□□□□□ -0.41
PFDN1-205ENST00000512925 MTCH2Q9Y6C9 303 aa12.5□□□□□ -0.41
PFDN1-205ENST00000512925 TCF20Q9UGU0 1960 aaKnown RBP12.5□□□□□ -0.41
PFDN1-205ENST00000512925 ZBED9Q6R2W3 1325 aa12.49□□□□□ -0.41
PFDN1-205ENST00000512925 TLL1O43897 1013 aa12.49□□□□□ -0.41
PFDN1-205ENST00000512925 RAD21O60216 631 aa12.49□□□□□ -0.41
PFDN1-205ENST00000512925 MBD4O95243 580 aa12.49□□□□□ -0.41
PFDN1-205ENST00000512925 PTGS1P23219 599 aa12.49□□□□□ -0.41
PFDN1-205ENST00000512925 TIE1P35590 1138 aa12.49□□□□□ -0.41
PFDN1-205ENST00000512925 ADD2P35612 726 aa12.49□□□□□ -0.41
PFDN1-205ENST00000512925 ITGA7Q13683 1181 aa12.49□□□□□ -0.41
PFDN1-205ENST00000512925 AAK1Q2M2I8 961 aa12.49□□□□□ -0.41
PFDN1-205ENST00000512925 CEP85Q6P2H3 762 aa12.49□□□□□ -0.41
PFDN1-205ENST00000512925 CTR9Q6PD62 1173 aa12.49□□□□□ -0.41
PFDN1-205ENST00000512925 CCDC144CPQ8IYA2 1237 aa12.49□□□□□ -0.41
PFDN1-205ENST00000512925 CPXCR1Q8N123 301 aa12.49□□□□□ -0.41
PFDN1-205ENST00000512925 PRPF38AQ8NAV1 312 aaKnown RBP12.49□□□□□ -0.41
PFDN1-205ENST00000512925 BBXQ8WY36 941 aaPredicted RBP12.49□□□□□ -0.41
PFDN1-205ENST00000512925 KHSRPQ92945 711 aaKnown RBP eCLIP12.49□□□□□ -0.418e-6■■■□□ 18.5
PFDN1-205ENST00000512925 TRPV6Q9H1D0 765 aa12.49□□□□□ -0.41
PFDN1-205ENST00000512925 C11orf16Q9NQ32 467 aa12.49□□□□□ -0.41
PFDN1-205ENST00000512925 GNEQ9Y223 722 aaKnown RBP12.49□□□□□ -0.41
PFDN1-205ENST00000512925 SLC4A7Q9Y6M7 1214 aa12.49□□□□□ -0.41
PFDN1-205ENST00000512925 EPOPA6NHQ4 379 aa12.48□□□□□ -0.41
PFDN1-205ENST00000512925 F5H6K3 240 aa12.48□□□□□ -0.41
PFDN1-205ENST00000512925 B4GALT4O60513 344 aa12.48□□□□□ -0.41
PFDN1-205ENST00000512925 NDUFB10O96000 172 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms