RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 CATSPERGQ6ZRH7 1159 aa12.04□□□□□ -0.48
LINC01550-203ENST00000512901 FBXO11Q86XK2 927 aa12.04□□□□□ -0.48
LINC01550-203ENST00000512901 DIS3L2Q8IYB7 885 aaKnown RBP12.04□□□□□ -0.48
LINC01550-203ENST00000512901 PHF20Q9BVI0 1012 aa12.04□□□□□ -0.48
LINC01550-203ENST00000512901 RANBP17Q9H2T7 1088 aaKnown RBP12.04□□□□□ -0.48
LINC01550-203ENST00000512901 ABT1Q9ULW3 272 aaKnown RBP12.04□□□□□ -0.48
LINC01550-203ENST00000512901 ZBED4O75132 1171 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 ZBTB48P10074 688 aaPredicted RBP12.03□□□□□ -0.48
LINC01550-203ENST00000512901 KRT2P35908 639 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 GTF2A2P52657 109 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 KIF23Q02241 960 aaPredicted RBP12.03□□□□□ -0.48
LINC01550-203ENST00000512901 FSTL1Q12841 308 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 TRAF1Q13077 416 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 COG2Q14746 738 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 FOXD4L6Q3SYB3 417 aaPredicted RBP12.03□□□□□ -0.48
LINC01550-203ENST00000512901 USH1GQ495M9 461 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 SPRYD7Q5W111 196 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 FOXD4L3Q6VB84 417 aaPredicted RBP12.03□□□□□ -0.48
LINC01550-203ENST00000512901 SAPCD2Q86UD0 394 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 ZSCAN16Q9H4T2 348 aaPredicted RBP12.03□□□□□ -0.48
LINC01550-203ENST00000512901 C6orf50Q9HD87 102 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 PCDHA1Q9Y5I3 950 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 PARP14Q460N5 1801 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 TMEM88BA6NKF7 163 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 PPP1R11O60927 126 aaPredicted RBP12.03□□□□□ -0.48
LINC01550-203ENST00000512901 FDX1P10109 184 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 CETPP11597 493 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 IRX3P78415 501 aaPredicted RBP12.03□□□□□ -0.48
LINC01550-203ENST00000512901 PABPC4Q13310 644 aaKnown RBP eCLIP12.03□□□□□ -0.48
LINC01550-203ENST00000512901 TYW1BQ6NUM6 668 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 RGMBQ6NW40 437 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 PPP1R18Q6NYC8 613 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 FAM177A1Q8N128 213 aaPredicted RBP12.03□□□□□ -0.48
LINC01550-203ENST00000512901 SHISA4Q96DD7 197 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 ATG4CQ96DT6 458 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 AGTPBP1Q9UPW5 1226 aa12.03□□□□□ -0.48
LINC01550-203ENST00000512901 CCL15-CCL14A0A0B4J2E2 113 aa12.02□□□□□ -0.48
LINC01550-203ENST00000512901 SMCO2A6NFE2 343 aa12.02□□□□□ -0.48
LINC01550-203ENST00000512901 GNA11P29992 359 aa12.02□□□□□ -0.48
LINC01550-203ENST00000512901 DSG3P32926 999 aa12.02□□□□□ -0.48
LINC01550-203ENST00000512901 RESTQ13127 1097 aa12.02□□□□□ -0.48
LINC01550-203ENST00000512901 CCL15Q16663 113 aa12.02□□□□□ -0.48
LINC01550-203ENST00000512901 HOXC10Q9NYD6 342 aa12.02□□□□□ -0.48
LINC01550-203ENST00000512901 TLL2Q9Y6L7 1015 aa12.02□□□□□ -0.48
LINC01550-203ENST00000512901 BTBD18B2RXH4 712 aa12.02□□□□□ -0.49
LINC01550-203ENST00000512901 ADCY7P51828 1080 aa12.02□□□□□ -0.49
LINC01550-203ENST00000512901 GALNT17Q6IS24 598 aa12.02□□□□□ -0.49
LINC01550-203ENST00000512901 BRAPQ7Z569 592 aa12.02□□□□□ -0.49
LINC01550-203ENST00000512901 CPXCR1Q8N123 301 aa12.02□□□□□ -0.49
LINC01550-203ENST00000512901 GBP4Q96PP9 640 aa12.02□□□□□ -0.49
LINC01550-203ENST00000512901 FOXP1Q9H334 677 aaPredicted RBP12.02□□□□□ -0.49
LINC01550-203ENST00000512901 SLC38A10Q9HBR0 1119 aa12.02□□□□□ -0.49
LINC01550-203ENST00000512901 PCDHA4Q9UN74 947 aa12.02□□□□□ -0.49
LINC01550-203ENST00000512901 MYPNQ86TC9 1320 aa12.02□□□□□ -0.49
LINC01550-203ENST00000512901 KIF28PB7ZC32 967 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 VWA5AO00534 786 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 OSBPP22059 807 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 HOXA7P31268 230 aaPredicted RBP12.01□□□□□ -0.49
LINC01550-203ENST00000512901 RASAL3Q86YV0 1011 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 BLIDQ8IZY5 108 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 BICD2Q8TD16 824 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 OXER1Q8TDS5 423 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 ZMYND12Q9H0C1 365 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 CCPG1Q9ULG6 757 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 RLFQ13129 1914 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 ESYT2A0FGR8 921 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 SPDYE16A6NNV3 312 aaPredicted RBP12.01□□□□□ -0.49
LINC01550-203ENST00000512901 ICAM1P05362 532 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 NCLP19338 710 aaKnown RBP12.01□□□□□ -0.49
LINC01550-203ENST00000512901 NR5A1Q13285 461 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 MOGSQ13724 837 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 FAM173BQ6P4H8 233 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 PAXIP1Q6ZW49 1069 aaPredicted RBP12.01□□□□□ -0.49
LINC01550-203ENST00000512901 NOSTRINQ8IVI9 506 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 CUL5Q93034 780 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 MS4A4AQ96JQ5 239 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 RAVER2Q9HCJ3 691 aaKnown RBP12.01□□□□□ -0.49
LINC01550-203ENST00000512901 PNMA3Q9UL41 463 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 PNMA2Q9UL42 364 aa12.01□□□□□ -0.49
LINC01550-203ENST00000512901 COL11A1P12107 1806 aaPredicted RBP12□□□□□ -0.49
LINC01550-203ENST00000512901 TAL1P17542 331 aaPredicted RBP12□□□□□ -0.49
LINC01550-203ENST00000512901 U2AF2P26368 475 aaKnown RBP eCLIP12□□□□□ -0.49
LINC01550-203ENST00000512901 MRPL12P52815 198 aaKnown RBP12□□□□□ -0.49
LINC01550-203ENST00000512901 DAGLBQ8NCG7 672 aa12□□□□□ -0.49
LINC01550-203ENST00000512901 AGBL1Q96MI9 1066 aa12□□□□□ -0.49
LINC01550-203ENST00000512901 GLT8D2Q9H1C3 349 aa12□□□□□ -0.49
LINC01550-203ENST00000512901 ASCC2Q9H1I8 757 aaPredicted RBP12□□□□□ -0.49
LINC01550-203ENST00000512901 PSTPIP2Q9H939 334 aa12□□□□□ -0.49
LINC01550-203ENST00000512901 ABCB11O95342 1321 aa12□□□□□ -0.49
LINC01550-203ENST00000512901 MYH15Q9Y2K3 1946 aa12□□□□□ -0.49
LINC01550-203ENST00000512901 SMCHD1A6NHR9 2005 aa12□□□□□ -0.49
LINC01550-203ENST00000512901 SLC10A3P09131 477 aa11.99□□□□□ -0.49
LINC01550-203ENST00000512901 ALAS1P13196 640 aa11.99□□□□□ -0.49
LINC01550-203ENST00000512901 PLS1Q14651 629 aa11.99□□□□□ -0.49
LINC01550-203ENST00000512901 NPY5RQ15761 445 aa11.99□□□□□ -0.49
LINC01550-203ENST00000512901 GPAT2Q6NUI2 795 aa11.99□□□□□ -0.49
LINC01550-203ENST00000512901 REXO1Q8N1G1 1221 aaKnown RBP11.99□□□□□ -0.49
LINC01550-203ENST00000512901 BRI3BPQ8WY22 251 aa11.99□□□□□ -0.49
LINC01550-203ENST00000512901 CCDC102AQ96A19 550 aa11.99□□□□□ -0.49
LINC01550-203ENST00000512901 RIC8AQ9NPQ8 531 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms