RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 HELLSQ9NRZ9 838 aa11.28□□□□□ -0.6
SNF8-211ENST00000512243 NDFIP2Q9NV92 336 aa11.28□□□□□ -0.6
SNF8-211ENST00000512243 USP40Q9NVE5 1235 aa11.28□□□□□ -0.6
SNF8-211ENST00000512243 TFIP11Q9UBB9 837 aaKnown RBP11.28□□□□□ -0.6
SNF8-211ENST00000512243 ZNF70Q9UC06 446 aaPredicted RBP11.28□□□□□ -0.6
SNF8-211ENST00000512243 ATXN7L1Q9ULK2 861 aaPredicted RBP11.28□□□□□ -0.6
SNF8-211ENST00000512243 RAD50Q92878 1312 aa11.28□□□□□ -0.6
SNF8-211ENST00000512243 LAMA4Q16363 1823 aa11.28□□□□□ -0.6
SNF8-211ENST00000512243 A0A1W2PNR3 127 aa11.27□□□□□ -0.61
SNF8-211ENST00000512243 RNF225M0QZC1 329 aaPredicted RBP11.27□□□□□ -0.61
SNF8-211ENST00000512243 GPAA1O43292 621 aa11.27□□□□□ -0.61
SNF8-211ENST00000512243 FGFR3P22607 806 aa11.27□□□□□ -0.61
SNF8-211ENST00000512243 CHMLP26374 656 aa11.27□□□□□ -0.61
SNF8-211ENST00000512243 TXLNAP40222 546 aa11.27□□□□□ -0.61
SNF8-211ENST00000512243 MAP2K3P46734 347 aa11.27□□□□□ -0.61
SNF8-211ENST00000512243 MFAP1P55081 439 aaKnown RBP11.27□□□□□ -0.61
SNF8-211ENST00000512243 RHBDL3P58872 404 aa11.27□□□□□ -0.61
SNF8-211ENST00000512243 MCMDC2Q4G0Z9 681 aa11.27□□□□□ -0.61
SNF8-211ENST00000512243 ANGEL2Q5VTE6 544 aaKnown RBP11.27□□□□□ -0.61
SNF8-211ENST00000512243 CWC27Q6UX04 472 aaKnown RBP11.27□□□□□ -0.61
SNF8-211ENST00000512243 LCORLQ8N3X6 602 aa11.27□□□□□ -0.61
SNF8-211ENST00000512243 SH3RF3Q8TEJ3 882 aaPredicted RBP11.27□□□□□ -0.61
SNF8-211ENST00000512243 DCPSQ96C86 337 aaKnown RBP11.27□□□□□ -0.61
SNF8-211ENST00000512243 RIOK1Q9BRS2 568 aaKnown RBP11.27□□□□□ -0.61
SNF8-211ENST00000512243 OXCT2Q9BYC2 517 aaPredicted RBP11.27□□□□□ -0.61
SNF8-211ENST00000512243 ARMT1Q9H993 441 aa11.27□□□□□ -0.61
SNF8-211ENST00000512243 ASTN2O75129 1339 aaPredicted RBP11.27□□□□□ -0.61
SNF8-211ENST00000512243 A6NJR5 290 aa11.26□□□□□ -0.61
SNF8-211ENST00000512243 TCP10L2B9ZVM9 353 aa11.26□□□□□ -0.61
SNF8-211ENST00000512243 GNAT2P19087 354 aa11.26□□□□□ -0.61
SNF8-211ENST00000512243 IRS1P35568 1242 aa11.26□□□□□ -0.61
SNF8-211ENST00000512243 USP5P45974 858 aa11.26□□□□□ -0.61
SNF8-211ENST00000512243 TNNI2P48788 182 aa11.26□□□□□ -0.61
SNF8-211ENST00000512243 CACNB3P54284 484 aa11.26□□□□□ -0.61
SNF8-211ENST00000512243 FOXK2Q01167 660 aa11.26□□□□□ -0.61
SNF8-211ENST00000512243 FKBP1CQ5VVH2 108 aa11.26□□□□□ -0.61
SNF8-211ENST00000512243 CCDC129Q6ZRS4 1044 aa11.26□□□□□ -0.61
SNF8-211ENST00000512243 NEDD1Q8NHV4 660 aa11.26□□□□□ -0.61
SNF8-211ENST00000512243 KLRG1Q96E93 195 aa11.26□□□□□ -0.61
SNF8-211ENST00000512243 CALR3Q96L12 384 aaKnown RBP11.26□□□□□ -0.61
SNF8-211ENST00000512243 SEC62Q99442 399 aaKnown RBP11.26□□□□□ -0.61
SNF8-211ENST00000512243 ENAMQ9NRM1 1142 aa11.26□□□□□ -0.61
SNF8-211ENST00000512243 ZDHHC3Q9NYG2 299 aa11.26□□□□□ -0.61
SNF8-211ENST00000512243 CCDC171Q6TFL3 1326 aa11.26□□□□□ -0.61
SNF8-211ENST00000512243 RPAP1Q9BWH6 1393 aaPredicted RBP11.26□□□□□ -0.61
SNF8-211ENST00000512243 DCDC2BA2VCK2 349 aa11.25□□□□□ -0.61
SNF8-211ENST00000512243 WDHD1O75717 1129 aaPredicted RBP11.25□□□□□ -0.61
SNF8-211ENST00000512243 BMP4P12644 408 aa11.25□□□□□ -0.61
SNF8-211ENST00000512243 CTBSQ01459 385 aa11.25□□□□□ -0.61
SNF8-211ENST00000512243 PICALMQ13492 652 aa11.25□□□□□ -0.61
SNF8-211ENST00000512243 FIGNL1Q6PIW4 674 aa11.25□□□□□ -0.61
SNF8-211ENST00000512243 KRT26Q7Z3Y9 468 aa11.25□□□□□ -0.61
SNF8-211ENST00000512243 ZNF589Q86UQ0 364 aaPredicted RBP11.25□□□□□ -0.61
SNF8-211ENST00000512243 TGFBRAP1Q8WUH2 860 aa11.25□□□□□ -0.61
SNF8-211ENST00000512243 STRBPQ96SI9 672 aaKnown RBP11.25□□□□□ -0.61
SNF8-211ENST00000512243 IDI2Q9BXS1 227 aa11.25□□□□□ -0.61
SNF8-211ENST00000512243 ZNF232Q9UNY5 417 aa11.25□□□□□ -0.61
SNF8-211ENST00000512243 PCDHGC4Q9Y5F7 938 aa11.25□□□□□ -0.61
SNF8-211ENST00000512243 MAFBQ9Y5Q3 323 aaPredicted RBP11.25□□□□□ -0.61
SNF8-211ENST00000512243 SLC4A4Q9Y6R1 1079 aa11.25□□□□□ -0.61
SNF8-211ENST00000512243 FLT1P17948 1338 aa11.25□□□□□ -0.61
SNF8-211ENST00000512243 SIPA1L1O43166 1804 aa11.25□□□□□ -0.61
SNF8-211ENST00000512243 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
SNF8-211ENST00000512243 PALM3A6NDB9 673 aaPredicted RBP11.24□□□□□ -0.61
SNF8-211ENST00000512243 C2CD2LO14523 706 aa11.24□□□□□ -0.61
SNF8-211ENST00000512243 ATXN7O15265 892 aaPredicted RBP11.24□□□□□ -0.61
SNF8-211ENST00000512243 NFIAQ12857 509 aa11.24□□□□□ -0.61
SNF8-211ENST00000512243 SH3PXD2AQ5TCZ1 1133 aa11.24□□□□□ -0.61
SNF8-211ENST00000512243 FAM83AQ86UY5 434 aa11.24□□□□□ -0.61
SNF8-211ENST00000512243 NLRP8Q86W28 1048 aa11.24□□□□□ -0.61
SNF8-211ENST00000512243 MAPKAPK5Q8IW41 473 aa11.24□□□□□ -0.61
SNF8-211ENST00000512243 SDR42E1Q8WUS8 393 aa11.24□□□□□ -0.61
SNF8-211ENST00000512243 ZIC5Q96T25 663 aa11.24□□□□□ -0.61
SNF8-211ENST00000512243 DDX4Q9NQI0 724 aaKnown RBP11.24□□□□□ -0.61
SNF8-211ENST00000512243 ATP8A2Q9NTI2 1148 aa11.24□□□□□ -0.61
SNF8-211ENST00000512243 PGAP2Q9UHJ9 254 aa11.24□□□□□ -0.61
SNF8-211ENST00000512243 PPP2R3BQ9Y5P8 575 aa11.24□□□□□ -0.61
SNF8-211ENST00000512243 SFI1A8K8P3 1242 aa11.23□□□□□ -0.61
SNF8-211ENST00000512243 ADM5C9JUS6 153 aa11.23□□□□□ -0.61
SNF8-211ENST00000512243 SGSM2O43147 1006 aa11.23□□□□□ -0.61
SNF8-211ENST00000512243 ENTPD3O75355 529 aa11.23□□□□□ -0.61
SNF8-211ENST00000512243 APPP05067 770 aa11.23□□□□□ -0.61
SNF8-211ENST00000512243 TDO2P48775 406 aa11.23□□□□□ -0.61
SNF8-211ENST00000512243 TCP10Q12799 353 aa11.23□□□□□ -0.61
SNF8-211ENST00000512243 MAP1SQ66K74 1059 aaPredicted RBP11.23□□□□□ -0.61
SNF8-211ENST00000512243 ZSCAN29Q8IWY8 852 aaPredicted RBP11.23□□□□□ -0.61
SNF8-211ENST00000512243 AMOTL1Q8IY63 956 aa11.23□□□□□ -0.61
SNF8-211ENST00000512243 FAM151AQ8WW52 585 aa11.23□□□□□ -0.61
SNF8-211ENST00000512243 NACAP1Q9BZK3 213 aa11.23□□□□□ -0.61
SNF8-211ENST00000512243 OSBPL5Q9H0X9 879 aaPredicted RBP11.23□□□□□ -0.61
SNF8-211ENST00000512243 DEFB129Q9H1M3 183 aa11.23□□□□□ -0.61
SNF8-211ENST00000512243 TSPAN10Q9H1Z9 355 aaPredicted RBP11.23□□□□□ -0.61
SNF8-211ENST00000512243 SCAF8Q9UPN6 1271 aaKnown RBP11.23□□□□□ -0.61
SNF8-211ENST00000512243 CNTNAP1P78357 1384 aa11.23□□□□□ -0.61
SNF8-211ENST00000512243 ATAD5Q96QE3 1844 aa11.23□□□□□ -0.61
SNF8-211ENST00000512243 OIP5O43482 229 aa11.22□□□□□ -0.61
SNF8-211ENST00000512243 PRKAB2O43741 272 aa11.22□□□□□ -0.61
SNF8-211ENST00000512243 GDF11O95390 407 aa11.22□□□□□ -0.61
SNF8-211ENST00000512243 HLA-DOAP06340 250 aa11.22□□□□□ -0.61
SNF8-211ENST00000512243 RASA1P20936 1047 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms