RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 CCDC140Q96MF4 163 aa6.45□□□□□ -1.38
MBD4-209ENST00000511009 PRR13Q9NZ81 148 aa6.45□□□□□ -1.38
MBD4-209ENST00000511009 MAPRE3Q9UPY8 281 aa6.45□□□□□ -1.38
MBD4-209ENST00000511009 ATP8A1Q9Y2Q0 1164 aa6.45□□□□□ -1.38
MBD4-209ENST00000511009 DYNC1LI2O43237 492 aaPredicted RBP6.44□□□□□ -1.38
MBD4-209ENST00000511009 EFCAB14O75071 495 aa6.44□□□□□ -1.38
MBD4-209ENST00000511009 LRRN2O75325 713 aa6.44□□□□□ -1.38
MBD4-209ENST00000511009 CPEP16870 476 aa6.44□□□□□ -1.38
MBD4-209ENST00000511009 HOXC12P31275 282 aa6.44□□□□□ -1.38
MBD4-209ENST00000511009 AMPD2Q01433 879 aa6.44□□□□□ -1.38
MBD4-209ENST00000511009 GRB10Q13322 594 aa6.44□□□□□ -1.38
MBD4-209ENST00000511009 SNW1Q13573 536 aaKnown RBP6.44□□□□□ -1.38
MBD4-209ENST00000511009 JAMLQ86YT9 394 aa6.44□□□□□ -1.38
MBD4-209ENST00000511009 AHI1Q8N157 1196 aa6.44□□□□□ -1.38
MBD4-209ENST00000511009 ATL2Q8NHH9 583 aa6.44□□□□□ -1.38
MBD4-209ENST00000511009 SHKBP1Q8TBC3 707 aa6.44□□□□□ -1.38
MBD4-209ENST00000511009 PSMG3-AS1Q96PY0 264 aa6.44□□□□□ -1.38
MBD4-209ENST00000511009 TARS2Q9BW92 718 aaKnown RBP6.44□□□□□ -1.38
MBD4-209ENST00000511009 IRF2BPLQ9H1B7 796 aa6.44□□□□□ -1.38
MBD4-209ENST00000511009 PRDM5Q9NQX1 630 aaPredicted RBP6.44□□□□□ -1.38
MBD4-209ENST00000511009 COL17A1Q9UMD9 1497 aaPredicted RBP6.44□□□□□ -1.38
MBD4-209ENST00000511009 GSG1L2A8MUP6 293 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 MEIS1O00470 390 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 OPA1O60313 960 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 DLX3O60479 287 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 VAMP4O75379 141 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 CBX7O95931 251 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 CPP00450 1065 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 ITIH2P19823 946 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 SDSP20132 328 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 SSTR4P31391 388 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 ECI1P42126 302 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 EVA1CP58658 441 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 MAP4K2Q12851 820 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 TRIM61Q5EBN2 209 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 SFRP5Q5T4F7 317 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 CWF19L1Q69YN2 538 aaKnown RBP6.43□□□□□ -1.38
MBD4-209ENST00000511009 BRAPQ7Z569 592 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 DDX42Q86XP3 938 aaKnown RBP eCLIP6.43□□□□□ -1.38
MBD4-209ENST00000511009 PPM1KQ8N3J5 372 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 STAG1Q8WVM7 1258 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 NKX2-4Q9H2Z4 354 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 CHST7Q9NS84 486 aa6.43□□□□□ -1.38
MBD4-209ENST00000511009 G3BP2Q9UN86 482 aaKnown RBP6.43□□□□□ -1.38
MBD4-209ENST00000511009 GPR55Q9Y2T6 319 aaPredicted RBP6.43□□□□□ -1.38
MBD4-209ENST00000511009 BLACEA4D250 179 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 KCNQ2O43526 872 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 SIGLEC6O43699 453 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 DNAJC8O75937 253 aaPredicted RBP6.42□□□□□ -1.38
MBD4-209ENST00000511009 EOMESO95936 686 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 F13BP05160 661 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 ADMP35318 185 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 FLT3P36888 993 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 CDKN1CP49918 316 aaPredicted RBP6.42□□□□□ -1.38
MBD4-209ENST00000511009 NEK4P51957 841 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 GFRA1P56159 465 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 POU4F1Q01851 419 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 SF1Q15637 639 aaKnown RBP6.42□□□□□ -1.38
MBD4-209ENST00000511009 CLEC16AQ2KHT3 1053 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 DPY19L1Q2PZI1 675 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 SEZ6L2Q6UXD5 910 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 USP53Q70EK8 1073 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 DDX46Q7L014 1031 aaKnown RBP6.42□□□□□ -1.38
MBD4-209ENST00000511009 TMC3Q7Z5M5 1100 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 RNF180Q86T96 592 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 DTX1Q86Y01 620 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 SLC7A14Q8TBB6 771 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 LEO1Q8WVC0 666 aaPredicted RBP6.42□□□□□ -1.38
MBD4-209ENST00000511009 DDX1Q92499 740 aaKnown RBP6.42□□□□□ -1.38
MBD4-209ENST00000511009 PTPRN2Q92932 1015 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 DUSP23Q9BVJ7 150 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 KRTAP9-2Q9BYQ4 174 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 SLC52A2Q9HAB3 445 aa6.42□□□□□ -1.38
MBD4-209ENST00000511009 ALG1L2C9J202 215 aa6.41□□□□□ -1.38
MBD4-209ENST00000511009 COBLO75128 1261 aa6.41□□□□□ -1.38
MBD4-209ENST00000511009 LEFTY1O75610 366 aa6.41□□□□□ -1.38
MBD4-209ENST00000511009 PRAMEF1O95521 474 aa6.41□□□□□ -1.38
MBD4-209ENST00000511009 ASLP04424 464 aa6.41□□□□□ -1.38
MBD4-209ENST00000511009 CAPNS1P04632 268 aa6.41□□□□□ -1.38
MBD4-209ENST00000511009 C6orf222P0C671 652 aaPredicted RBP6.41□□□□□ -1.38
MBD4-209ENST00000511009 FAM87AP0C7U9 286 aa6.41□□□□□ -1.38
MBD4-209ENST00000511009 HOXA10P31260 410 aaPredicted RBP6.41□□□□□ -1.38
MBD4-209ENST00000511009 KIR3DL1P43629 444 aa6.41□□□□□ -1.38
MBD4-209ENST00000511009 NMIQ13287 307 aaPredicted RBP6.41□□□□□ -1.38
MBD4-209ENST00000511009 FAM50AQ14320 339 aaKnown RBP6.41□□□□□ -1.38
MBD4-209ENST00000511009 NFXL1Q6ZNB6 911 aa6.41□□□□□ -1.38
MBD4-209ENST00000511009 MAMDC2Q7Z304 686 aaPredicted RBP6.41□□□□□ -1.38
MBD4-209ENST00000511009 DTWD2Q8NBA8 298 aa6.41□□□□□ -1.38
MBD4-209ENST00000511009 TMEM145Q8NBT3 493 aa6.41□□□□□ -1.38
MBD4-209ENST00000511009 MAGEB10Q96LZ2 347 aaPredicted RBP6.41□□□□□ -1.38
MBD4-209ENST00000511009 FAM126AQ9BYI3 521 aaPredicted RBP6.41□□□□□ -1.38
MBD4-209ENST00000511009 TRIM39Q9HCM9 518 aa6.41□□□□□ -1.38
MBD4-209ENST00000511009 CYP26B1Q9NR63 512 aa6.41□□□□□ -1.38
MBD4-209ENST00000511009 C1GALT1Q9NS00 363 aa6.41□□□□□ -1.38
MBD4-209ENST00000511009 GTF2IRD1Q9UHL9 959 aa6.41□□□□□ -1.38
MBD4-209ENST00000511009 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.4□□□□□ -1.38
MBD4-209ENST00000511009 H0Y8X5 98 aa6.4□□□□□ -1.38
MBD4-209ENST00000511009 GSNP06396 782 aa6.4□□□□□ -1.38
MBD4-209ENST00000511009 CD3EP07766 207 aa6.4□□□□□ -1.38
MBD4-209ENST00000511009 IGFALSP35858 605 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms