RNA–Protein interactions for RNA: ENST00000509848.5

ARHGEF28-208, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-208ENST00000509848 FBXO40Q9UH90 709 aa23.48■■□□□ 1.35
ARHGEF28-208ENST00000509848 CCDC171Q6TFL3 1326 aa23.48■■□□□ 1.35
ARHGEF28-208ENST00000509848 CNTN2Q02246 1040 aa23.47■■□□□ 1.35
ARHGEF28-208ENST00000509848 CCDC96Q2M329 555 aa23.47■■□□□ 1.35
ARHGEF28-208ENST00000509848 RNF180Q86T96 592 aa23.47■■□□□ 1.35
ARHGEF28-208ENST00000509848 MSL3Q8N5Y2 521 aaKnown RBP23.47■■□□□ 1.35
ARHGEF28-208ENST00000509848 LBHD1Q9BQE6 289 aaPredicted RBP23.47■■□□□ 1.35
ARHGEF28-208ENST00000509848 PRDM5Q9NQX1 630 aaPredicted RBP23.47■■□□□ 1.35
ARHGEF28-208ENST00000509848 PRR12Q9ULL5 1215 aa23.47■■□□□ 1.35
ARHGEF28-208ENST00000509848 SYNGAP1Q96PV0 1343 aa23.47■■□□□ 1.35
ARHGEF28-208ENST00000509848 FDX1P10109 184 aa23.46■■□□□ 1.35
ARHGEF28-208ENST00000509848 ALAS1P13196 640 aa23.46■■□□□ 1.35
ARHGEF28-208ENST00000509848 NOVP48745 357 aa23.46■■□□□ 1.35
ARHGEF28-208ENST00000509848 IRX5P78411 483 aaPredicted RBP23.46■■□□□ 1.35
ARHGEF28-208ENST00000509848 TTBK2Q6IQ55 1244 aa23.46■■□□□ 1.35
ARHGEF28-208ENST00000509848 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.46■■□□□ 1.35
ARHGEF28-208ENST00000509848 ACAD9Q9H845 621 aa23.46■■□□□ 1.35
ARHGEF28-208ENST00000509848 RNF146Q9NTX7 359 aa23.46■■□□□ 1.35
ARHGEF28-208ENST00000509848 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.46■■□□□ 1.35
ARHGEF28-208ENST00000509848 PRKAG2Q9UGJ0 569 aa23.46■■□□□ 1.35
ARHGEF28-208ENST00000509848 PLXNA1Q9UIW2 1896 aa23.46■■□□□ 1.35
ARHGEF28-208ENST00000509848 FAM184BQ9ULE4 1060 aa23.46■■□□□ 1.35
ARHGEF28-208ENST00000509848 PHF24Q9UPV7 400 aa23.46■■□□□ 1.35
ARHGEF28-208ENST00000509848 SUPT16HQ9Y5B9 1047 aaKnown RBP23.46■■□□□ 1.35
ARHGEF28-208ENST00000509848 SLC16A2P36021 539 aa23.45■■□□□ 1.34
ARHGEF28-208ENST00000509848 ACVR2BQ13705 512 aa23.45■■□□□ 1.34
ARHGEF28-208ENST00000509848 ZNF467Q7Z7K2 595 aaPredicted RBP23.45■■□□□ 1.34
ARHGEF28-208ENST00000509848 TICAM2Q86XR7 235 aa23.45■■□□□ 1.34
ARHGEF28-208ENST00000509848 TBC1D10CQ8IV04 446 aa23.45■■□□□ 1.34
ARHGEF28-208ENST00000509848 TRERF1Q96PN7 1200 aa23.45■■□□□ 1.34
ARHGEF28-208ENST00000509848 TMEM47Q9BQJ4 181 aa23.45■■□□□ 1.34
ARHGEF28-208ENST00000509848 OSBPL3Q9H4L5 887 aa23.45■■□□□ 1.34
ARHGEF28-208ENST00000509848 FRMPD2Q68DX3 1309 aaPredicted RBP23.44■■□□□ 1.34
ARHGEF28-208ENST00000509848 POTEB2H3BUK9 544 aa23.44■■□□□ 1.34
ARHGEF28-208ENST00000509848 ADCY6O43306 1168 aa23.44■■□□□ 1.34
ARHGEF28-208ENST00000509848 PLA2G6O60733 806 aa23.44■■□□□ 1.34
ARHGEF28-208ENST00000509848 ADAMTS4O75173 837 aa23.44■■□□□ 1.34
ARHGEF28-208ENST00000509848 SNX17Q15036 470 aa23.44■■□□□ 1.34
ARHGEF28-208ENST00000509848 MUM1L1Q5H9M0 696 aa23.44■■□□□ 1.34
ARHGEF28-208ENST00000509848 CWC27Q6UX04 472 aaKnown RBP23.44■■□□□ 1.34
ARHGEF28-208ENST00000509848 ARMCX2Q7L311 632 aa23.44■■□□□ 1.34
ARHGEF28-208ENST00000509848 SH3RF1Q7Z6J0 888 aa23.44■■□□□ 1.34
ARHGEF28-208ENST00000509848 GPCPD1Q9NPB8 672 aa23.44■■□□□ 1.34
ARHGEF28-208ENST00000509848 A1CFQ9NQ94 594 aaKnown RBP23.44■■□□□ 1.34
ARHGEF28-208ENST00000509848 DDX49Q9Y6V7 483 aaKnown RBP23.44■■□□□ 1.34
ARHGEF28-208ENST00000509848 LAMA3Q16787 3333 aa23.44■■□□□ 1.34
ARHGEF28-208ENST00000509848 SMCHD1A6NHR9 2005 aa23.43■■□□□ 1.34
ARHGEF28-208ENST00000509848 SYNRGQ9UMZ2 1314 aa23.43■■□□□ 1.34
ARHGEF28-208ENST00000509848 MYADML2A6NDP7 307 aa23.43■■□□□ 1.34
ARHGEF28-208ENST00000509848 SOWAHBA6NEL2 793 aa23.43■■□□□ 1.34
ARHGEF28-208ENST00000509848 TOP1P11387 765 aaKnown RBP23.43■■□□□ 1.34
ARHGEF28-208ENST00000509848 TLE2Q04725 743 aa23.43■■□□□ 1.34
ARHGEF28-208ENST00000509848 LRIT3Q3SXY7 679 aa23.43■■□□□ 1.34
ARHGEF28-208ENST00000509848 AKNAD1Q5T1N1 836 aa23.43■■□□□ 1.34
ARHGEF28-208ENST00000509848 CCDC144CPQ8IYA2 1237 aa23.43■■□□□ 1.34
ARHGEF28-208ENST00000509848 FAM133AQ8N9E0 248 aa23.43■■□□□ 1.34
ARHGEF28-208ENST00000509848 DCAF4Q8WV16 495 aa23.43■■□□□ 1.34
ARHGEF28-208ENST00000509848 ZMYM6O95789 1325 aa23.42■■□□□ 1.34
ARHGEF28-208ENST00000509848 A0A1W2PQ45 241 aaPredicted RBP23.42■■□□□ 1.34
ARHGEF28-208ENST00000509848 A0A1W2PQY0 241 aa23.42■■□□□ 1.34
ARHGEF28-208ENST00000509848 CCDC144BQ3MJ40 725 aa23.42■■□□□ 1.34
ARHGEF28-208ENST00000509848 MFSD6Q6ZSS7 791 aa23.42■■□□□ 1.34
ARHGEF28-208ENST00000509848 PDLIM7Q9NR12 457 aa23.42■■□□□ 1.34
ARHGEF28-208ENST00000509848 TCP11L1Q9NUJ3 509 aa23.42■■□□□ 1.34
ARHGEF28-208ENST00000509848 CCPG1Q9ULG6 757 aa23.42■■□□□ 1.34
ARHGEF28-208ENST00000509848 TRIM43BA6NCK2 446 aa23.41■■□□□ 1.34
ARHGEF28-208ENST00000509848 KCNA10Q16322 511 aa23.41■■□□□ 1.34
ARHGEF28-208ENST00000509848 TKFCQ3LXA3 575 aa23.41■■□□□ 1.34
ARHGEF28-208ENST00000509848 Q7L0L9 218 aa23.41■■□□□ 1.34
ARHGEF28-208ENST00000509848 KLHDC9Q8NEP7 349 aa23.41■■□□□ 1.34
ARHGEF28-208ENST00000509848 BADQ92934 168 aa23.41■■□□□ 1.34
ARHGEF28-208ENST00000509848 TRIM43Q96BQ3 446 aaPredicted RBP23.41■■□□□ 1.34
ARHGEF28-208ENST00000509848 PURBQ96QR8 312 aaKnown RBP23.41■■□□□ 1.34
ARHGEF28-208ENST00000509848 ZKSCAN3Q9BRR0 538 aa23.41■■□□□ 1.34
ARHGEF28-208ENST00000509848 ABHD16BQ9H3Z7 469 aa23.41■■□□□ 1.34
ARHGEF28-208ENST00000509848 DIAPH3Q9NSV4 1193 aa23.41■■□□□ 1.34
ARHGEF28-208ENST00000509848 NEDD4P46934 1319 aa23.4■■□□□ 1.34
ARHGEF28-208ENST00000509848 DUSP11O75319 330 aaKnown RBP23.4■■□□□ 1.34
ARHGEF28-208ENST00000509848 ACLYP53396 1101 aa23.4■■□□□ 1.34
ARHGEF28-208ENST00000509848 MFAP1P55081 439 aaKnown RBP23.4■■□□□ 1.34
ARHGEF28-208ENST00000509848 IRX6P78412 446 aaPredicted RBP23.4■■□□□ 1.34
ARHGEF28-208ENST00000509848 SYDE2Q5VT97 1194 aa23.4■■□□□ 1.34
ARHGEF28-208ENST00000509848 C1orf53Q5VUE5 145 aa23.4■■□□□ 1.34
ARHGEF28-208ENST00000509848 KATNBL1Q9H079 304 aa23.4■■□□□ 1.34
ARHGEF28-208ENST00000509848 ASTN1O14525 1302 aa23.39■■□□□ 1.34
ARHGEF28-208ENST00000509848 ZNF213O14771 459 aa23.39■■□□□ 1.33
ARHGEF28-208ENST00000509848 PQBP1O60828 265 aaKnown RBP23.39■■□□□ 1.33
ARHGEF28-208ENST00000509848 NSMFQ6X4W1 530 aa23.39■■□□□ 1.33
ARHGEF28-208ENST00000509848 TSEN34Q9BSV6 310 aaKnown RBP23.39■■□□□ 1.33
ARHGEF28-208ENST00000509848 RANBP17Q9H2T7 1088 aaKnown RBP23.39■■□□□ 1.33
ARHGEF28-208ENST00000509848 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.38■■□□□ 1.33
ARHGEF28-208ENST00000509848 ICAM1P05362 532 aa23.38■■□□□ 1.33
ARHGEF28-208ENST00000509848 C6orf222P0C671 652 aaPredicted RBP23.38■■□□□ 1.33
ARHGEF28-208ENST00000509848 PDHBP11177 359 aa23.38■■□□□ 1.33
ARHGEF28-208ENST00000509848 ITGB8P26012 769 aa23.38■■□□□ 1.33
ARHGEF28-208ENST00000509848 CCSAPQ6IQ19 270 aaPredicted RBP23.38■■□□□ 1.33
ARHGEF28-208ENST00000509848 BTNL9Q6UXG8 535 aa23.38■■□□□ 1.33
ARHGEF28-208ENST00000509848 STARD7Q9NQZ5 370 aa23.38■■□□□ 1.33
ARHGEF28-208ENST00000509848 CYP39A1Q9NYL5 469 aa23.38■■□□□ 1.33
ARHGEF28-208ENST00000509848 PTGS1P23219 599 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms