RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 MTMR7Q9Y216 660 aa21.17■□□□□ 0.98
TPM3-220ENST00000509601 TTC22Q5TAA0 569 aa21.16■□□□□ 0.98
TPM3-220ENST00000509601 BTNL9Q6UXG8 535 aa21.16■□□□□ 0.98
TPM3-220ENST00000509601 ANKRD35Q8N283 1001 aa21.16■□□□□ 0.98
TPM3-220ENST00000509601 GDF15Q99988 308 aa21.16■□□□□ 0.98
TPM3-220ENST00000509601 DSCC1Q9BVC3 393 aa21.16■□□□□ 0.98
TPM3-220ENST00000509601 SYN1P17600 705 aa21.15■□□□□ 0.98
TPM3-220ENST00000509601 IKQ13123 557 aaPredicted RBP21.15■□□□□ 0.98
TPM3-220ENST00000509601 LRRC41Q15345 812 aa21.15■□□□□ 0.98
TPM3-220ENST00000509601 ZNF467Q7Z7K2 595 aaPredicted RBP21.15■□□□□ 0.98
TPM3-220ENST00000509601 RNF41Q9H4P4 317 aaPredicted RBP21.15■□□□□ 0.98
TPM3-220ENST00000509601 PCDH10Q9P2E7 1040 aa21.15■□□□□ 0.98
TPM3-220ENST00000509601 NEDD4P46934 1319 aa21.14■□□□□ 0.97
TPM3-220ENST00000509601 SYNGAP1Q96PV0 1343 aa21.14■□□□□ 0.97
TPM3-220ENST00000509601 SLC16A2P36021 539 aa21.14■□□□□ 0.97
TPM3-220ENST00000509601 ATN1P54259 1190 aaPredicted RBP21.14■□□□□ 0.97
TPM3-220ENST00000509601 TKFCQ3LXA3 575 aa21.14■□□□□ 0.97
TPM3-220ENST00000509601 CCDC174Q6PII3 467 aa21.14■□□□□ 0.97
TPM3-220ENST00000509601 TRERF1Q96PN7 1200 aa21.14■□□□□ 0.97
TPM3-220ENST00000509601 HOMER2Q9NSB8 354 aa21.14■□□□□ 0.97
TPM3-220ENST00000509601 BMP8BP34820 402 aa21.13■□□□□ 0.97
TPM3-220ENST00000509601 FAM133AQ8N9E0 248 aa21.13■□□□□ 0.97
TPM3-220ENST00000509601 ZKSCAN3Q9BRR0 538 aa21.13■□□□□ 0.97
TPM3-220ENST00000509601 ACAD9Q9H845 621 aa21.13■□□□□ 0.97
TPM3-220ENST00000509601 A1CFQ9NQ94 594 aaKnown RBP21.13■□□□□ 0.97
TPM3-220ENST00000509601 RNF146Q9NTX7 359 aa21.13■□□□□ 0.97
TPM3-220ENST00000509601 CNPY2Q9Y2B0 182 aa21.13■□□□□ 0.97
TPM3-220ENST00000509601 LAMA3Q16787 3333 aa21.12■□□□□ 0.97
TPM3-220ENST00000509601 SNHG28P0DPA3 235 aa21.12■□□□□ 0.97
TPM3-220ENST00000509601 PDHBP11177 359 aa21.12■□□□□ 0.97
TPM3-220ENST00000509601 ALAS1P13196 640 aa21.12■□□□□ 0.97
TPM3-220ENST00000509601 CNTN2Q02246 1040 aa21.12■□□□□ 0.97
TPM3-220ENST00000509601 CCDC96Q2M329 555 aa21.12■□□□□ 0.97
TPM3-220ENST00000509601 MUM1L1Q5H9M0 696 aa21.12■□□□□ 0.97
TPM3-220ENST00000509601 SLC39A5Q6ZMH5 540 aa21.12■□□□□ 0.97
TPM3-220ENST00000509601 DGKHQ86XP1 1220 aa21.12■□□□□ 0.97
TPM3-220ENST00000509601 ESR2Q92731 530 aa21.12■□□□□ 0.97
TPM3-220ENST00000509601 RANBP17Q9H2T7 1088 aaKnown RBP21.12■□□□□ 0.97
TPM3-220ENST00000509601 GPCPD1Q9NPB8 672 aa21.12■□□□□ 0.97
TPM3-220ENST00000509601 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.12■□□□□ 0.97
TPM3-220ENST00000509601 FRMPD2Q68DX3 1309 aaPredicted RBP21.11■□□□□ 0.97
TPM3-220ENST00000509601 SOWAHBA6NEL2 793 aa21.11■□□□□ 0.97
TPM3-220ENST00000509601 KBTBD13C9JR72 458 aa21.11■□□□□ 0.97
TPM3-220ENST00000509601 PGK1P00558 417 aa21.11■□□□□ 0.97
TPM3-220ENST00000509601 MYCNP04198 464 aaPredicted RBP21.11■□□□□ 0.97
TPM3-220ENST00000509601 RARBP10826 455 aa21.11■□□□□ 0.97
TPM3-220ENST00000509601 AKR1A1P14550 325 aa21.11■□□□□ 0.97
TPM3-220ENST00000509601 ADCYAP1R1P41586 468 aa21.11■□□□□ 0.97
TPM3-220ENST00000509601 ACVR2BQ13705 512 aa21.11■□□□□ 0.97
TPM3-220ENST00000509601 SYDE2Q5VT97 1194 aa21.11■□□□□ 0.97
TPM3-220ENST00000509601 ANKS1AQ92625 1134 aa21.11■□□□□ 0.97
TPM3-220ENST00000509601 XPNPEP3Q9NQH7 507 aa21.11■□□□□ 0.97
TPM3-220ENST00000509601 ZSWIM5Q9P217 1185 aa21.11■□□□□ 0.97
TPM3-220ENST00000509601 A0A1W2PPC1 479 aa21.1■□□□□ 0.97
TPM3-220ENST00000509601 POTEB2H3BUK9 544 aa21.1■□□□□ 0.97
TPM3-220ENST00000509601 KDM4AO75164 1064 aa21.1■□□□□ 0.97
TPM3-220ENST00000509601 ADAMTS4O75173 837 aa21.1■□□□□ 0.97
TPM3-220ENST00000509601 ICAM1P05362 532 aa21.1■□□□□ 0.97
TPM3-220ENST00000509601 MAGEA10P43363 369 aaPredicted RBP21.1■□□□□ 0.97
TPM3-220ENST00000509601 ZNF543Q08ER8 600 aa21.1■□□□□ 0.97
TPM3-220ENST00000509601 LENG1Q96BZ8 264 aaPredicted RBP21.1■□□□□ 0.97
TPM3-220ENST00000509601 KATNBL1Q9H079 304 aa21.1■□□□□ 0.97
TPM3-220ENST00000509601 CTNNA3Q9UI47 895 aa21.1■□□□□ 0.97
TPM3-220ENST00000509601 FAM184BQ9ULE4 1060 aa21.1■□□□□ 0.97
TPM3-220ENST00000509601 B4E1Z4 1266 aa21.09■□□□□ 0.97
TPM3-220ENST00000509601 CHMLP26374 656 aa21.09■□□□□ 0.97
TPM3-220ENST00000509601 NT5C2P49902 561 aa21.09■□□□□ 0.97
TPM3-220ENST00000509601 RTP1P59025 263 aa21.09■□□□□ 0.97
TPM3-220ENST00000509601 IMMTQ16891 758 aaKnown RBP21.09■□□□□ 0.97
TPM3-220ENST00000509601 ARMCX2Q7L311 632 aa21.09■□□□□ 0.97
TPM3-220ENST00000509601 CCDC144CPQ8IYA2 1237 aa21.09■□□□□ 0.97
TPM3-220ENST00000509601 FERMT2Q96AC1 680 aa21.09■□□□□ 0.97
TPM3-220ENST00000509601 ABHD16BQ9H3Z7 469 aa21.09■□□□□ 0.97
TPM3-220ENST00000509601 PHF24Q9UPV7 400 aa21.09■□□□□ 0.97
TPM3-220ENST00000509601 ADCY6O43306 1168 aa21.08■□□□□ 0.97
TPM3-220ENST00000509601 SNX17Q15036 470 aa21.08■□□□□ 0.97
TPM3-220ENST00000509601 KLHDC9Q8NEP7 349 aa21.08■□□□□ 0.97
TPM3-220ENST00000509601 CYP39A1Q9NYL5 469 aa21.08■□□□□ 0.97
TPM3-220ENST00000509601 ZHX1Q9UKY1 873 aaPredicted RBP21.08■□□□□ 0.97
TPM3-220ENST00000509601 CCPG1Q9ULG6 757 aa21.08■□□□□ 0.97
TPM3-220ENST00000509601 MCM3APO60318 1980 aa21.08■□□□□ 0.96
TPM3-220ENST00000509601 ASTN1O14525 1302 aa21.07■□□□□ 0.96
TPM3-220ENST00000509601 PTH1RQ03431 593 aa21.07■□□□□ 0.96
TPM3-220ENST00000509601 CCDC178Q5BJE1 867 aa21.07■□□□□ 0.96
TPM3-220ENST00000509601 C1orf53Q5VUE5 145 aa21.07■□□□□ 0.96
TPM3-220ENST00000509601 CCSAPQ6IQ19 270 aaPredicted RBP21.07■□□□□ 0.96
TPM3-220ENST00000509601 RNF180Q86T96 592 aa21.07■□□□□ 0.96
TPM3-220ENST00000509601 PURBQ96QR8 312 aaKnown RBP21.07■□□□□ 0.96
TPM3-220ENST00000509601 ZSCAN10Q96SZ4 725 aaPredicted RBP21.07■□□□□ 0.96
TPM3-220ENST00000509601 DUSP11O75319 330 aaKnown RBP21.06■□□□□ 0.96
TPM3-220ENST00000509601 GOLGA8HP0CJ92 632 aa21.06■□□□□ 0.96
TPM3-220ENST00000509601 IRX5P78411 483 aaPredicted RBP21.06■□□□□ 0.96
TPM3-220ENST00000509601 CCDC144BQ3MJ40 725 aa21.06■□□□□ 0.96
TPM3-220ENST00000509601 IQCA1Q86XH1 822 aa21.06■□□□□ 0.96
TPM3-220ENST00000509601 ATP11BQ9Y2G3 1177 aa21.06■□□□□ 0.96
TPM3-220ENST00000509601 DDX49Q9Y6V7 483 aaKnown RBP21.06■□□□□ 0.96
TPM3-220ENST00000509601 SOX1O00570 391 aaPredicted RBP21.05■□□□□ 0.96
TPM3-220ENST00000509601 TRIM60Q495X7 471 aa21.05■□□□□ 0.96
TPM3-220ENST00000509601 NSMFQ6X4W1 530 aa21.05■□□□□ 0.96
TPM3-220ENST00000509601 ENAHQ8N8S7 591 aaPredicted RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms