RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 CLEC4MQ9H2X3 399 aaPredicted RBP4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 ZNF576Q9H609 170 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 ATP6V0A2Q9Y487 856 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 SCN7AQ01118 1682 aa4.79□□□□□ -1.64
HMGN1P11-201ENST00000508668 IBTKQ9P2D0 1353 aaPredicted RBP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 UBR2Q8IWV8 1755 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 WDR33Q9C0J8 1336 aaKnown RBP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 ZNF541Q9H0D2 1346 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 BRCA1P38398 1863 aaKnown RBP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 COL3A1P02461 1466 aaPredicted RBP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 KLRG2A4D1S0 409 aaPredicted RBP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 CCDC85CA6NKD9 419 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 FZD9O00144 591 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 SOX1O00570 391 aaPredicted RBP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 GIPC1O14908 333 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 FSCN2O14926 492 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 RAD17O75943 681 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 CELF2O95319 508 aaKnown RBP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 USP17L7P0C7H9 530 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 ESRRAP11474 423 aaPredicted RBP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 HCLS1P14317 486 aaPredicted RBP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 ITPKAP23677 461 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 GSTT1P30711 240 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 HOXA10P31260 410 aaPredicted RBP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 TMPOP42166 694 aaKnown RBP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 ZNF157P51786 506 aaPredicted RBP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 GNAI1P63096 354 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 DAB2P98082 770 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 PCDH1Q08174 1060 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 TCIRG1Q13488 830 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 GRAPQ13588 217 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 SETDB1Q15047 1291 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 GRIK4Q16099 956 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 CCDC152Q4G0S7 254 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 CCDC30Q5VVM6 783 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 DTWD1Q8N5C7 304 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 PLBD2Q8NHP8 589 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 GRAPLQ8TC17 118 aaPredicted RBP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 FRMD6Q96NE9 622 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 GPR101Q96P66 508 aaPredicted RBP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 SRCIN1Q9C0H9 1055 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 PRDM10Q9NQV6 1147 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 SEC31BQ9NQW1 1179 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 DDX21Q9NR30 783 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 FAM8A1Q9UBU6 413 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 VTI1BQ9UEU0 232 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 GPN3Q9UHW5 284 aaPredicted RBP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 AK5Q9Y6K8 562 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 VIRMAQ69YN4 1812 aaKnown RBP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 GOLGB1Q14789 3259 aaKnown RBP4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 CNTNAP1P78357 1384 aa4.78□□□□□ -1.64
HMGN1P11-201ENST00000508668 KIAA1551Q9HCM1 1747 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 ABCC4O15439 1325 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 CDHR2Q9BYE9 1310 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 IRS4O14654 1257 aaPredicted RBP4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 SORBS3O60504 671 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 FBXO24O75426 580 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 NTSR2O95665 410 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 HOXB7P09629 217 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 SPATA31C1P0DKV0 1188 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 ELNP15502 786 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 RPS12P25398 132 aaKnown RBP4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 MAP2K2P36507 400 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 IGHMBP2P38935 993 aaKnown RBP4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 ARL4DP49703 201 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 GSK3AP49840 483 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 GMPSP49915 693 aaPredicted RBP4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 LBX1P52954 281 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 NLRP12P59046 1061 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 CRY2Q49AN0 593 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 TAF7LQ5H9L4 462 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 SHISA2Q6UWI4 295 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 OLFM4Q6UX06 510 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 FBXO11Q86XK2 927 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 ANKRD18AQ8IVF6 992 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 MAP4K3Q8IVH8 894 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 ZNF34Q8IZ26 560 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 GALNT11Q8NCW6 608 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 KLHDC7BQ96G42 594 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 CAPNS2Q96L46 248 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 CDC5LQ99459 802 aaKnown RBP4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 MPHOSPH8Q99549 860 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 BCL11AQ9H165 835 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 SRA1Q9HD15 236 aaKnown RBP4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 GPRC5DQ9NZD1 345 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 CHPF2Q9P2E5 772 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 CNOT7Q9UIV1 285 aaKnown RBP4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 HDAC9Q9UKV0 1011 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 DLEC1Q9Y238 1755 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 NRXN2Q9P2S2 1712 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 CACNA1SQ13698 1873 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 ADAMTS7Q9UKP4 1686 aa4.77□□□□□ -1.65
HMGN1P11-201ENST00000508668 SCN4AP35499 1836 aa4.76□□□□□ -1.65
HMGN1P11-201ENST00000508668 RBM47A0AV96 593 aaKnown RBP4.76□□□□□ -1.65
HMGN1P11-201ENST00000508668 RASSF10A6NK89 507 aa4.76□□□□□ -1.65
HMGN1P11-201ENST00000508668 ELL2O00472 640 aaPredicted RBP4.76□□□□□ -1.65
HMGN1P11-201ENST00000508668 FOXN1O15353 648 aa4.76□□□□□ -1.65
HMGN1P11-201ENST00000508668 DDX3YO15523 660 aaKnown RBP4.76□□□□□ -1.65
HMGN1P11-201ENST00000508668 ANP32CO43423 234 aa4.76□□□□□ -1.65
HMGN1P11-201ENST00000508668 WDHD1O75717 1129 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms