RNA–Protein interactions for RNA: ENST00000508350.1

CDH18-208, Transcript of cadherin 18, humanhuman

TSL 4

Gene CDH18, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-208ENST00000508350 RBPJLQ9UBG7 517 aa5.32□□□□□ -1.56
CDH18-208ENST00000508350 SNX14Q9Y5W7 946 aa5.32□□□□□ -1.56
CDH18-208ENST00000508350 RLFQ13129 1914 aa5.32□□□□□ -1.56
CDH18-208ENST00000508350 TNKSO95271 1327 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 TMEM232C9JQI7 657 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 TLR2O60603 784 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 DTNBO60941 627 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 FKTNO75072 461 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 ALDH1A1P00352 501 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 GOLGA8HP0CJ92 632 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 BCRP11274 1271 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 PCP11498 1178 aaKnown RBP5.31□□□□□ -1.56
CDH18-208ENST00000508350 RXRAP19793 462 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 HOXA7P31268 230 aaPredicted RBP5.31□□□□□ -1.56
CDH18-208ENST00000508350 SLC16A2P36021 539 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 SLC1A4P43007 532 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 NOVP48745 357 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 USP14P54578 494 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 HERVK_113P62684 666 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 TRDNQ13061 729 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 CCDC96Q2M329 555 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 SLC35G1Q2M3R5 365 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 PROX2Q3B8N5 592 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 Q3C1V9 767 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 TMEM67Q5HYA8 995 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 COL13A1Q5TAT6 717 aaPredicted RBP5.31□□□□□ -1.56
CDH18-208ENST00000508350 OTUD7BQ6GQQ9 843 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 RALYLQ86SE5 291 aaKnown RBP5.31□□□□□ -1.56
CDH18-208ENST00000508350 PARP9Q8IXQ6 854 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 GMCL1P1Q8NEA9 526 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 NCOA7Q8NI08 942 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 IGDCC4Q8TDY8 1250 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 SMCR8Q8TEV9 937 aaPredicted RBP5.31□□□□□ -1.56
CDH18-208ENST00000508350 DDX12PQ92771 950 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 KIFC2Q96AC6 838 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 LRCH3Q96II8 777 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 JAKMIP1Q96N16 626 aaKnown RBP5.31□□□□□ -1.56
CDH18-208ENST00000508350 PARK7Q99497 189 aaKnown RBP5.31□□□□□ -1.56
CDH18-208ENST00000508350 UBAC1Q9BSL1 405 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 MYL10Q9BUA6 226 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 TBC1D2Q9BYX2 928 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 KRT23Q9C075 422 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 UBA5Q9GZZ9 404 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 CNNM2Q9H8M5 875 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 LY9Q9HBG7 655 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 TCP11L1Q9NUJ3 509 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 SAGE1Q9NXZ1 904 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 BTBD7Q9P203 1132 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 SLC45A1Q9Y2W3 748 aa5.31□□□□□ -1.56
CDH18-208ENST00000508350 COL11A1P12107 1806 aaPredicted RBP5.3□□□□□ -1.56
CDH18-208ENST00000508350 PARP14Q460N5 1801 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 SH2B2O14492 632 aaPredicted RBP5.3□□□□□ -1.56
CDH18-208ENST00000508350 WDR46O15213 610 aaKnown RBP5.3□□□□□ -1.56
CDH18-208ENST00000508350 MAP3K7O43318 606 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 PDHBP11177 359 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 BMP3P12645 472 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 SLC4A3P48751 1232 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 EXOSC10Q01780 885 aaKnown RBP5.3□□□□□ -1.56
CDH18-208ENST00000508350 SP3Q02447 781 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 IKQ13123 557 aaPredicted RBP5.3□□□□□ -1.56
CDH18-208ENST00000508350 PLS1Q14651 629 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 COG2Q14746 738 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 TSGA10IPQ3SY00 556 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 IFIT1BQ5T764 474 aaKnown RBP5.3□□□□□ -1.56
CDH18-208ENST00000508350 RNF20Q5VTR2 975 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 IQCA1Q86XH1 822 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 DGKHQ86XP1 1220 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 CCDC144CPQ8IYA2 1237 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 STAG2Q8N3U4 1231 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 PNMA1Q8ND90 353 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 ANKS1AQ92625 1134 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 LPAR1Q92633 364 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 TRIM47Q96LD4 638 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 NEK1Q96PY6 1258 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 CFHR5Q9BXR6 569 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 UPF3BQ9BZI7 483 aaKnown RBP5.3□□□□□ -1.56
CDH18-208ENST00000508350 PORCNQ9H237 461 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 SH2D4AQ9H788 454 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 KAT14Q9H8E8 782 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 EFCC1Q9HA90 598 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 ZCCHC17Q9NP64 241 aaKnown RBP5.3□□□□□ -1.56
CDH18-208ENST00000508350 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.3□□□□□ -1.56
CDH18-208ENST00000508350 TSR3Q9UJK0 312 aaKnown RBP5.3□□□□□ -1.56
CDH18-208ENST00000508350 PNMA3Q9UL41 463 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 BRPF3Q9ULD4 1205 aa5.3□□□□□ -1.56
CDH18-208ENST00000508350 VWA5AO00534 786 aa5.29□□□□□ -1.56
CDH18-208ENST00000508350 FMNL1O95466 1100 aaPredicted RBP5.29□□□□□ -1.56
CDH18-208ENST00000508350 ZKSCAN1P17029 563 aaPredicted RBP5.29□□□□□ -1.56
CDH18-208ENST00000508350 CASTP20810 708 aaKnown RBP5.29□□□□□ -1.56
CDH18-208ENST00000508350 RPS6KB1P23443 525 aa5.29□□□□□ -1.56
CDH18-208ENST00000508350 MCM5P33992 734 aa5.29□□□□□ -1.56
CDH18-208ENST00000508350 PSMC4P43686 418 aa5.29□□□□□ -1.56
CDH18-208ENST00000508350 ERVK-9P63128 1117 aa5.29□□□□□ -1.56
CDH18-208ENST00000508350 ERVK-24P63145 666 aa5.29□□□□□ -1.56
CDH18-208ENST00000508350 LACTBP83111 547 aaPredicted RBP5.29□□□□□ -1.56
CDH18-208ENST00000508350 KCNC4Q03721 635 aa5.29□□□□□ -1.56
CDH18-208ENST00000508350 ZNF543Q08ER8 600 aa5.29□□□□□ -1.56
CDH18-208ENST00000508350 APOBRQ0VD83 1088 aa5.29□□□□□ -1.56
CDH18-208ENST00000508350 PABPC4Q13310 644 aaKnown RBP eCLIP5.29□□□□□ -1.56
CDH18-208ENST00000508350 TMEM132BQ14DG7 1078 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms