RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 CASTP20810 708 aaKnown RBP17.48■□□□□ 0.39
RNF4-210ENST00000508235 GRK4P32298 578 aa17.48■□□□□ 0.39
RNF4-210ENST00000508235 ANAPC15P60006 121 aa17.48■□□□□ 0.39
RNF4-210ENST00000508235 MAP2K5Q13163 448 aa17.48■□□□□ 0.39
RNF4-210ENST00000508235 KCTD2Q14681 263 aa17.48■□□□□ 0.39
RNF4-210ENST00000508235 NUP133Q8WUM0 1156 aa17.48■□□□□ 0.39
RNF4-210ENST00000508235 APBA2Q99767 749 aa17.48■□□□□ 0.39
RNF4-210ENST00000508235 TM6SF1Q9BZW5 370 aa17.48■□□□□ 0.39
RNF4-210ENST00000508235 SENP2Q9HC62 589 aa17.48■□□□□ 0.39
RNF4-210ENST00000508235 MYH6P13533 1939 aa17.48■□□□□ 0.39
RNF4-210ENST00000508235 DHX16O60231 1041 aaKnown RBP17.47■□□□□ 0.39
RNF4-210ENST00000508235 SLC4A3P48751 1232 aa17.47■□□□□ 0.39
RNF4-210ENST00000508235 GNAQP50148 359 aa17.47■□□□□ 0.39
RNF4-210ENST00000508235 C8orf34Q49A92 452 aa17.47■□□□□ 0.39
RNF4-210ENST00000508235 CCDC174Q6PII3 467 aa17.47■□□□□ 0.39
RNF4-210ENST00000508235 USP6NLQ92738 828 aa17.47■□□□□ 0.39
RNF4-210ENST00000508235 ARMC5Q96C12 935 aa17.47■□□□□ 0.39
RNF4-210ENST00000508235 MMP19Q99542 508 aa17.47■□□□□ 0.39
RNF4-210ENST00000508235 LRRC2Q9BYS8 371 aa17.47■□□□□ 0.39
RNF4-210ENST00000508235 UBA5Q9GZZ9 404 aa17.47■□□□□ 0.39
RNF4-210ENST00000508235 MAD2L2Q9UI95 211 aa17.47■□□□□ 0.39
RNF4-210ENST00000508235 CCPG1Q9ULG6 757 aa17.47■□□□□ 0.39
RNF4-210ENST00000508235 ZNF536O15090 1300 aa17.47■□□□□ 0.39
RNF4-210ENST00000508235 CYP2B6P20813 491 aa17.46■□□□□ 0.39
RNF4-210ENST00000508235 RPS6KB1P23443 525 aa17.46■□□□□ 0.39
RNF4-210ENST00000508235 ADORA2AP29274 412 aa17.46■□□□□ 0.39
RNF4-210ENST00000508235 UBXN2AP68543 259 aa17.46■□□□□ 0.39
RNF4-210ENST00000508235 RUFY3Q7L099 469 aa17.46■□□□□ 0.39
RNF4-210ENST00000508235 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.46■□□□□ 0.39
RNF4-210ENST00000508235 DPP9Q86TI2 863 aa17.46■□□□□ 0.39
RNF4-210ENST00000508235 ADGRF4Q8IZF3 695 aa17.46■□□□□ 0.39
RNF4-210ENST00000508235 FBXL16Q8N461 479 aa17.46■□□□□ 0.39
RNF4-210ENST00000508235 AGBL1Q96MI9 1066 aa17.46■□□□□ 0.39
RNF4-210ENST00000508235 TCEANC2Q96MN5 208 aa17.46■□□□□ 0.39
RNF4-210ENST00000508235 LZTS2Q9BRK4 669 aa17.46■□□□□ 0.39
RNF4-210ENST00000508235 ACAD9Q9H845 621 aa17.46■□□□□ 0.39
RNF4-210ENST00000508235 ZSWIM6Q9HCJ5 1215 aa17.46■□□□□ 0.39
RNF4-210ENST00000508235 GPHNQ9NQX3 736 aaPredicted RBP17.46■□□□□ 0.39
RNF4-210ENST00000508235 RIPK3Q9Y572 518 aa17.46■□□□□ 0.39
RNF4-210ENST00000508235 CYP46A1Q9Y6A2 500 aa17.46■□□□□ 0.39
RNF4-210ENST00000508235 HOXC6P09630 235 aa17.45■□□□□ 0.38
RNF4-210ENST00000508235 ALAS1P13196 640 aa17.45■□□□□ 0.38
RNF4-210ENST00000508235 SMARCA1P28370 1054 aa17.45■□□□□ 0.38
RNF4-210ENST00000508235 RCAN1P53805 252 aa17.45■□□□□ 0.38
RNF4-210ENST00000508235 SNAP25P60880 206 aa17.45■□□□□ 0.38
RNF4-210ENST00000508235 TRAF1Q13077 416 aa17.45■□□□□ 0.38
RNF4-210ENST00000508235 COL9A3Q14050 684 aaPredicted RBP17.45■□□□□ 0.38
RNF4-210ENST00000508235 STAG2Q8N3U4 1231 aa17.45■□□□□ 0.38
RNF4-210ENST00000508235 BIN2Q9UBW5 565 aaPredicted RBP17.45■□□□□ 0.38
RNF4-210ENST00000508235 PLXNA1Q9UIW2 1896 aa17.44■□□□□ 0.38
RNF4-210ENST00000508235 HMGCRP04035 888 aa17.44■□□□□ 0.38
RNF4-210ENST00000508235 PPP2R5BQ15173 497 aa17.44■□□□□ 0.38
RNF4-210ENST00000508235 CDC37Q16543 378 aaPredicted RBP17.44■□□□□ 0.38
RNF4-210ENST00000508235 APOA5Q6Q788 366 aa17.44■□□□□ 0.38
RNF4-210ENST00000508235 Q6ZUG5 572 aa17.44■□□□□ 0.38
RNF4-210ENST00000508235 ANKRD35Q8N283 1001 aa17.44■□□□□ 0.38
RNF4-210ENST00000508235 FANCBQ8NB91 859 aa17.44■□□□□ 0.38
RNF4-210ENST00000508235 DDX11Q96FC9 970 aa17.44■□□□□ 0.38
RNF4-210ENST00000508235 TRERF1Q96PN7 1200 aa17.44■□□□□ 0.38
RNF4-210ENST00000508235 MYL10Q9BUA6 226 aa17.44■□□□□ 0.38
RNF4-210ENST00000508235 VAT1LQ9HCJ6 419 aa17.44■□□□□ 0.38
RNF4-210ENST00000508235 HOMER2Q9NSB8 354 aa17.44■□□□□ 0.38
RNF4-210ENST00000508235 RNF146Q9NTX7 359 aa17.44■□□□□ 0.38
RNF4-210ENST00000508235 RBM28Q9NW13 759 aaKnown RBP17.44■□□□□ 0.38
RNF4-210ENST00000508235 PFASO15067 1338 aa17.44■□□□□ 0.38
RNF4-210ENST00000508235 ZBTB43O43298 467 aa17.43■□□□□ 0.38
RNF4-210ENST00000508235 CPA1P15085 419 aa17.43■□□□□ 0.38
RNF4-210ENST00000508235 SH3TC2Q8TF17 1288 aa17.43■□□□□ 0.38
RNF4-210ENST00000508235 ZNF333Q96JL9 665 aa17.43■□□□□ 0.38
RNF4-210ENST00000508235 CPVLQ9H3G5 476 aa17.43■□□□□ 0.38
RNF4-210ENST00000508235 RIOX1Q9H6W3 641 aa17.43■□□□□ 0.38
RNF4-210ENST00000508235 JMJD4Q9H9V9 463 aa17.43■□□□□ 0.38
RNF4-210ENST00000508235 DIS3Q9Y2L1 958 aaKnown RBP17.43■□□□□ 0.38
RNF4-210ENST00000508235 KLF18A0A0U1RQI7 1052 aa17.42■□□□□ 0.38
RNF4-210ENST00000508235 CCDC85CA6NKD9 419 aa17.42■□□□□ 0.38
RNF4-210ENST00000508235 ZBTB5O15062 677 aa17.42■□□□□ 0.38
RNF4-210ENST00000508235 SEC24BO95487 1268 aa17.42■□□□□ 0.38
RNF4-210ENST00000508235 ELNP15502 786 aa17.42■□□□□ 0.38
RNF4-210ENST00000508235 MICU3Q86XE3 530 aa17.42■□□□□ 0.38
RNF4-210ENST00000508235 TRIB2Q92519 343 aa17.42■□□□□ 0.38
RNF4-210ENST00000508235 BRF1Q92994 677 aa17.42■□□□□ 0.38
RNF4-210ENST00000508235 IL17RAQ96F46 866 aa17.42■□□□□ 0.38
RNF4-210ENST00000508235 SPZ1Q9BXG8 430 aa17.42■□□□□ 0.38
RNF4-210ENST00000508235 AMNQ9BXJ7 453 aa17.42■□□□□ 0.38
RNF4-210ENST00000508235 AGXT2Q9BYV1 514 aa17.42■□□□□ 0.38
RNF4-210ENST00000508235 MAF1Q9H063 256 aa17.42■□□□□ 0.38
RNF4-210ENST00000508235 UPF2Q9HAU5 1272 aaKnown RBP17.42■□□□□ 0.38
RNF4-210ENST00000508235 ABCB11O95342 1321 aa17.42■□□□□ 0.38
RNF4-210ENST00000508235 CCDC196A0A1B0GTZ2 297 aa17.41■□□□□ 0.38
RNF4-210ENST00000508235 COBLO75128 1261 aa17.41■□□□□ 0.38
RNF4-210ENST00000508235 INHAP05111 366 aa17.41■□□□□ 0.38
RNF4-210ENST00000508235 QRICH1Q2TAL8 776 aa17.41■□□□□ 0.38
RNF4-210ENST00000508235 MFSD14CQ5VZR4 134 aa17.41■□□□□ 0.38
RNF4-210ENST00000508235 OLFML2BQ68BL8 750 aa17.41■□□□□ 0.38
RNF4-210ENST00000508235 FBXO11Q86XK2 927 aa17.41■□□□□ 0.38
RNF4-210ENST00000508235 NPLOC4Q8TAT6 608 aa17.41■□□□□ 0.38
RNF4-210ENST00000508235 MTMR8Q96EF0 704 aa17.41■□□□□ 0.38
RNF4-210ENST00000508235 PDRG1Q9NUG6 133 aa17.41■□□□□ 0.38
RNF4-210ENST00000508235 BRPF3Q9ULD4 1205 aa17.41■□□□□ 0.38
RNF4-210ENST00000508235 NAP1L2Q9ULW6 460 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms