RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 PPP1R11O60927 126 aaPredicted RBP20.09■□□□□ 0.81
RNF4-209ENST00000507784 ZBED4O75132 1171 aa20.09■□□□□ 0.81
RNF4-209ENST00000507784 KRT2P35908 639 aa20.09■□□□□ 0.81
RNF4-209ENST00000507784 ZNF157P51786 506 aaPredicted RBP20.09■□□□□ 0.81
RNF4-209ENST00000507784 COG2Q14746 738 aa20.09■□□□□ 0.81
RNF4-209ENST00000507784 USH1GQ495M9 461 aa20.09■□□□□ 0.81
RNF4-209ENST00000507784 TREML2Q5T2D2 321 aa20.09■□□□□ 0.81
RNF4-209ENST00000507784 DIS3L2Q8IYB7 885 aaKnown RBP20.09■□□□□ 0.81
RNF4-209ENST00000507784 ZNF784Q8NCA9 323 aaPredicted RBP20.09■□□□□ 0.81
RNF4-209ENST00000507784 AMNQ9BXJ7 453 aa20.09■□□□□ 0.81
RNF4-209ENST00000507784 RANBP17Q9H2T7 1088 aaKnown RBP20.09■□□□□ 0.81
RNF4-209ENST00000507784 C6orf50Q9HD87 102 aa20.09■□□□□ 0.81
RNF4-209ENST00000507784 PPP1R9AQ9ULJ8 1098 aa20.09■□□□□ 0.81
RNF4-209ENST00000507784 ATP6V1DQ9Y5K8 247 aa20.09■□□□□ 0.81
RNF4-209ENST00000507784 LOC285556D6RIA3 1793 aa20.08■□□□□ 0.81
RNF4-209ENST00000507784 BTBD18B2RXH4 712 aa20.08■□□□□ 0.81
RNF4-209ENST00000507784 CALML3P27482 149 aa20.08■□□□□ 0.81
RNF4-209ENST00000507784 DSG3P32926 999 aa20.08■□□□□ 0.81
RNF4-209ENST00000507784 GTF2A2P52657 109 aa20.08■□□□□ 0.81
RNF4-209ENST00000507784 KIF23Q02241 960 aaPredicted RBP20.08■□□□□ 0.81
RNF4-209ENST00000507784 SPRYD7Q5W111 196 aa20.08■□□□□ 0.81
RNF4-209ENST00000507784 TYW1BQ6NUM6 668 aa20.08■□□□□ 0.81
RNF4-209ENST00000507784 ABT1Q9ULW3 272 aaKnown RBP20.08■□□□□ 0.81
RNF4-209ENST00000507784 PCDHA1Q9Y5I3 950 aa20.08■□□□□ 0.81
RNF4-209ENST00000507784 PARP14Q460N5 1801 aa20.07■□□□□ 0.8
RNF4-209ENST00000507784 KIF28PB7ZC32 967 aa20.07■□□□□ 0.8
RNF4-209ENST00000507784 TRAF1Q13077 416 aa20.07■□□□□ 0.8
RNF4-209ENST00000507784 BLIDQ8IZY5 108 aa20.07■□□□□ 0.8
RNF4-209ENST00000507784 CPXCR1Q8N123 301 aa20.07■□□□□ 0.8
RNF4-209ENST00000507784 OXER1Q8TDS5 423 aa20.07■□□□□ 0.8
RNF4-209ENST00000507784 ATG4CQ96DT6 458 aa20.07■□□□□ 0.8
RNF4-209ENST00000507784 HOXC10Q9NYD6 342 aa20.07■□□□□ 0.8
RNF4-209ENST00000507784 PCDHA4Q9UN74 947 aa20.07■□□□□ 0.8
RNF4-209ENST00000507784 TMEM88BA6NKF7 163 aa20.06■□□□□ 0.8
RNF4-209ENST00000507784 CETPP11597 493 aa20.06■□□□□ 0.8
RNF4-209ENST00000507784 OSBPP22059 807 aa20.06■□□□□ 0.8
RNF4-209ENST00000507784 ADCY7P51828 1080 aa20.06■□□□□ 0.8
RNF4-209ENST00000507784 IRX3P78415 501 aaPredicted RBP20.06■□□□□ 0.8
RNF4-209ENST00000507784 FSTL1Q12841 308 aa20.06■□□□□ 0.8
RNF4-209ENST00000507784 PABPC4Q13310 644 aaKnown RBP eCLIP20.06■□□□□ 0.8
RNF4-209ENST00000507784 RGMBQ6NW40 437 aa20.06■□□□□ 0.8
RNF4-209ENST00000507784 PPP1R18Q6NYC8 613 aa20.06■□□□□ 0.8
RNF4-209ENST00000507784 FAM173BQ6P4H8 233 aa20.06■□□□□ 0.8
RNF4-209ENST00000507784 GBP4Q96PP9 640 aa20.06■□□□□ 0.8
RNF4-209ENST00000507784 AGTPBP1Q9UPW5 1226 aa20.06■□□□□ 0.8
RNF4-209ENST00000507784 CCL15-CCL14A0A0B4J2E2 113 aa20.05■□□□□ 0.8
RNF4-209ENST00000507784 ZBTB48P10074 688 aaPredicted RBP20.05■□□□□ 0.8
RNF4-209ENST00000507784 FDX1P10109 184 aa20.05■□□□□ 0.8
RNF4-209ENST00000507784 TAL1P17542 331 aaPredicted RBP20.05■□□□□ 0.8
RNF4-209ENST00000507784 NCLP19338 710 aaKnown RBP20.05■□□□□ 0.8
RNF4-209ENST00000507784 GNA11P29992 359 aa20.05■□□□□ 0.8
RNF4-209ENST00000507784 NR5A1Q13285 461 aa20.05■□□□□ 0.8
RNF4-209ENST00000507784 CCL15Q16663 113 aa20.05■□□□□ 0.8
RNF4-209ENST00000507784 GALNT17Q6IS24 598 aa20.05■□□□□ 0.8
RNF4-209ENST00000507784 SAPCD2Q86UD0 394 aa20.05■□□□□ 0.8
RNF4-209ENST00000507784 FAM177A1Q8N128 213 aaPredicted RBP20.05■□□□□ 0.8
RNF4-209ENST00000507784 CHAMP1Q96JM3 812 aa20.05■□□□□ 0.8
RNF4-209ENST00000507784 FOXP1Q9H334 677 aaPredicted RBP20.05■□□□□ 0.8
RNF4-209ENST00000507784 RAVER2Q9HCJ3 691 aaKnown RBP20.05■□□□□ 0.8
RNF4-209ENST00000507784 CCPG1Q9ULG6 757 aa20.05■□□□□ 0.8
RNF4-209ENST00000507784 TLL2Q9Y6L7 1015 aa20.05■□□□□ 0.8
RNF4-209ENST00000507784 MYH15Q9Y2K3 1946 aa20.05■□□□□ 0.8
RNF4-209ENST00000507784 VWA5AO00534 786 aa20.04■□□□□ 0.8
RNF4-209ENST00000507784 BAG4O95429 457 aaKnown RBP20.04■□□□□ 0.8
RNF4-209ENST00000507784 HOXA7P31268 230 aaPredicted RBP20.04■□□□□ 0.8
RNF4-209ENST00000507784 MOGSQ13724 837 aa20.04■□□□□ 0.8
RNF4-209ENST00000507784 GPAT2Q6NUI2 795 aa20.04■□□□□ 0.8
RNF4-209ENST00000507784 BRAPQ7Z569 592 aa20.04■□□□□ 0.8
RNF4-209ENST00000507784 RASAL3Q86YV0 1011 aa20.04■□□□□ 0.8
RNF4-209ENST00000507784 AGBL1Q96MI9 1066 aa20.04■□□□□ 0.8
RNF4-209ENST00000507784 ZMYND12Q9H0C1 365 aa20.04■□□□□ 0.8
RNF4-209ENST00000507784 SLC38A10Q9HBR0 1119 aa20.04■□□□□ 0.8
RNF4-209ENST00000507784 COL11A1P12107 1806 aaPredicted RBP20.04■□□□□ 0.8
RNF4-209ENST00000507784 RLFQ13129 1914 aa20.04■□□□□ 0.8
RNF4-209ENST00000507784 U2AF2P26368 475 aaKnown RBP eCLIP20.03■□□□□ 0.86e-8■□□□□ 9.9
RNF4-209ENST00000507784 MRPL12P52815 198 aaKnown RBP20.03■□□□□ 0.8
RNF4-209ENST00000507784 DNM1Q05193 864 aaKnown RBP20.03■□□□□ 0.8
RNF4-209ENST00000507784 PAXIP1Q6ZW49 1069 aaPredicted RBP20.03■□□□□ 0.8
RNF4-209ENST00000507784 NOSTRINQ8IVI9 506 aa20.03■□□□□ 0.8
RNF4-209ENST00000507784 BICD2Q8TD16 824 aa20.03■□□□□ 0.8
RNF4-209ENST00000507784 ZNF396Q96N95 335 aaPredicted RBP20.03■□□□□ 0.8
RNF4-209ENST00000507784 P2RX7Q99572 595 aaKnown RBP20.03■□□□□ 0.8
RNF4-209ENST00000507784 ASCC2Q9H1I8 757 aaPredicted RBP20.03■□□□□ 0.8
RNF4-209ENST00000507784 PSTPIP2Q9H939 334 aa20.03■□□□□ 0.8
RNF4-209ENST00000507784 BIN2Q9UBW5 565 aaPredicted RBP20.03■□□□□ 0.8
RNF4-209ENST00000507784 ABCB11O95342 1321 aa20.02■□□□□ 0.8
RNF4-209ENST00000507784 MYPNQ86TC9 1320 aa20.02■□□□□ 0.8
RNF4-209ENST00000507784 TCHHQ07283 1943 aa20.02■□□□□ 0.8
RNF4-209ENST00000507784 ESYT2A0FGR8 921 aa20.02■□□□□ 0.8
RNF4-209ENST00000507784 SPDYE16A6NNV3 312 aaPredicted RBP20.02■□□□□ 0.8
RNF4-209ENST00000507784 ADAMTS3O15072 1205 aa20.02■□□□□ 0.8
RNF4-209ENST00000507784 ICAM1P05362 532 aa20.02■□□□□ 0.8
RNF4-209ENST00000507784 ALAS1P13196 640 aa20.02■□□□□ 0.8
RNF4-209ENST00000507784 PLS1Q14651 629 aa20.02■□□□□ 0.8
RNF4-209ENST00000507784 NPY5RQ15761 445 aa20.02■□□□□ 0.8
RNF4-209ENST00000507784 JAKMIP3Q5VZ66 844 aa20.02■□□□□ 0.8
RNF4-209ENST00000507784 DAGLBQ8NCG7 672 aa20.02■□□□□ 0.8
RNF4-209ENST00000507784 RASGRP4Q8TDF6 673 aa20.02■□□□□ 0.8
RNF4-209ENST00000507784 CUL5Q93034 780 aa20.02■□□□□ 0.8
RNF4-209ENST00000507784 MS4A4AQ96JQ5 239 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms