RNA–Protein interactions for RNA: ENST00000507197.5

SNHG4-204, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 2 BASIC

Gene SNHG4, Length 865 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-204ENST00000507197 STX8Q9UNK0 236 aa15.23■□□□□ 0.03
SNHG4-204ENST00000507197 ELP1O95163 1332 aa15.22■□□□□ 0.03
SNHG4-204ENST00000507197 C6orf222P0C671 652 aaPredicted RBP15.22■□□□□ 0.03
SNHG4-204ENST00000507197 CST5P28325 142 aaPredicted RBP15.22■□□□□ 0.03
SNHG4-204ENST00000507197 SMAD3P84022 425 aaKnown RBP15.22■□□□□ 0.03
SNHG4-204ENST00000507197 ARMCX2Q7L311 632 aa15.22■□□□□ 0.03
SNHG4-204ENST00000507197 TICAM2Q86XR7 235 aa15.22■□□□□ 0.03
SNHG4-204ENST00000507197 KLHDC9Q8NEP7 349 aa15.22■□□□□ 0.03
SNHG4-204ENST00000507197 EVI5LQ96CN4 794 aa15.22■□□□□ 0.03
SNHG4-204ENST00000507197 HOMER2Q9NSB8 354 aa15.22■□□□□ 0.03
SNHG4-204ENST00000507197 ZNFX1Q9P2E3 1918 aaKnown RBP15.21■□□□□ 0.03
SNHG4-204ENST00000507197 ASB14A6NK59 587 aa15.21■□□□□ 0.03
SNHG4-204ENST00000507197 FPGSQ05932 587 aa15.21■□□□□ 0.03
SNHG4-204ENST00000507197 KCNA10Q16322 511 aa15.21■□□□□ 0.03
SNHG4-204ENST00000507197 CCDC144BQ3MJ40 725 aa15.21■□□□□ 0.03
SNHG4-204ENST00000507197 C9orf50Q5SZB4 431 aa15.21■□□□□ 0.03
SNHG4-204ENST00000507197 CCDC174Q6PII3 467 aa15.21■□□□□ 0.03
SNHG4-204ENST00000507197 OTUD7AQ8TE49 926 aaPredicted RBP15.21■□□□□ 0.03
SNHG4-204ENST00000507197 VTI1AQ96AJ9 217 aa15.21■□□□□ 0.03
SNHG4-204ENST00000507197 LENG1Q96BZ8 264 aaPredicted RBP15.21■□□□□ 0.03
SNHG4-204ENST00000507197 PLXNA1Q9UIW2 1896 aa15.2■□□□□ 0.02
SNHG4-204ENST00000507197 LTBP2Q14767 1821 aa15.2■□□□□ 0.02
SNHG4-204ENST00000507197 RANBP6O60518 1105 aaKnown RBP15.2■□□□□ 0.02
SNHG4-204ENST00000507197 MCCP23508 829 aa15.2■□□□□ 0.02
SNHG4-204ENST00000507197 RRP1P56182 461 aaKnown RBP15.2■□□□□ 0.02
SNHG4-204ENST00000507197 GJA9P57773 515 aa15.2■□□□□ 0.02
SNHG4-204ENST00000507197 ANKRD45Q5TZF3 282 aa15.2■□□□□ 0.02
SNHG4-204ENST00000507197 CCSAPQ6IQ19 270 aaPredicted RBP15.2■□□□□ 0.02
SNHG4-204ENST00000507197 RCSD1Q6JBY9 416 aa15.2■□□□□ 0.02
SNHG4-204ENST00000507197 CCDC144CPQ8IYA2 1237 aa15.2■□□□□ 0.02
SNHG4-204ENST00000507197 RNPC3Q96LT9 517 aaKnown RBP15.2■□□□□ 0.02
SNHG4-204ENST00000507197 GUCD1Q96NT3 240 aa15.2■□□□□ 0.02
SNHG4-204ENST00000507197 UPF3AQ9H1J1 476 aaKnown RBP15.2■□□□□ 0.02
SNHG4-204ENST00000507197 HELLSQ9NRZ9 838 aa15.2■□□□□ 0.02
SNHG4-204ENST00000507197 RNF146Q9NTX7 359 aa15.2■□□□□ 0.02
SNHG4-204ENST00000507197 ANAPC4Q9UJX5 808 aa15.2■□□□□ 0.02
SNHG4-204ENST00000507197 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNHG4-204ENST00000507197 TMEM265A0A087WTH1 108 aa15.19■□□□□ 0.02
SNHG4-204ENST00000507197 ASGR1P07306 291 aa15.19■□□□□ 0.02
SNHG4-204ENST00000507197 FAAP100Q0VG06 881 aa15.19■□□□□ 0.02
SNHG4-204ENST00000507197 GNASQ5JWF2 1037 aa15.19■□□□□ 0.02
SNHG4-204ENST00000507197 FAM133AQ8N9E0 248 aa15.19■□□□□ 0.02
SNHG4-204ENST00000507197 FAM161BQ96MY7 647 aa15.19■□□□□ 0.02
SNHG4-204ENST00000507197 TRERF1Q96PN7 1200 aa15.19■□□□□ 0.02
SNHG4-204ENST00000507197 A1CFQ9NQ94 594 aaKnown RBP15.19■□□□□ 0.02
SNHG4-204ENST00000507197 SALL3Q9BXA9 1300 aa15.18■□□□□ 0.02
SNHG4-204ENST00000507197 MYH4Q9Y623 1939 aa15.18■□□□□ 0.02
SNHG4-204ENST00000507197 A0A0U1RQG5 324 aaPredicted RBP15.18■□□□□ 0.02
SNHG4-204ENST00000507197 TLR3O15455 904 aaKnown RBP15.18■□□□□ 0.02
SNHG4-204ENST00000507197 ORC4O43929 436 aa15.18■□□□□ 0.02
SNHG4-204ENST00000507197 TIMP1P01033 207 aa15.18■□□□□ 0.02
SNHG4-204ENST00000507197 ALAS1P13196 640 aa15.18■□□□□ 0.02
SNHG4-204ENST00000507197 ITGB8P26012 769 aa15.18■□□□□ 0.02
SNHG4-204ENST00000507197 TNFAIP2Q03169 654 aa15.18■□□□□ 0.02
SNHG4-204ENST00000507197 CTDSPL2Q05D32 466 aa15.18■□□□□ 0.02
SNHG4-204ENST00000507197 ALX1Q15699 326 aa15.18■□□□□ 0.02
SNHG4-204ENST00000507197 KCTD1Q719H9 257 aa15.18■□□□□ 0.02
SNHG4-204ENST00000507197 NOL8Q76FK4 1167 aaKnown RBP15.18■□□□□ 0.02
SNHG4-204ENST00000507197 DCAF4Q8WV16 495 aa15.18■□□□□ 0.02
SNHG4-204ENST00000507197 FGD4Q96M96 766 aa15.18■□□□□ 0.02
SNHG4-204ENST00000507197 AGBL1Q96MI9 1066 aa15.18■□□□□ 0.02
SNHG4-204ENST00000507197 SEZ6LQ9BYH1 1024 aa15.18■□□□□ 0.02
SNHG4-204ENST00000507197 SEMA6BQ9H3T3 888 aa15.18■□□□□ 0.02
SNHG4-204ENST00000507197 TOMM22Q9NS69 142 aa15.18■□□□□ 0.02
SNHG4-204ENST00000507197 PNMA2Q9UL42 364 aa15.18■□□□□ 0.02
SNHG4-204ENST00000507197 ZNF536O15090 1300 aa15.17■□□□□ 0.02
SNHG4-204ENST00000507197 LAMA2P24043 3122 aaKnown RBP15.17■□□□□ 0.02
SNHG4-204ENST00000507197 ARVCFO00192 962 aa15.17■□□□□ 0.02
SNHG4-204ENST00000507197 ZEB2O60315 1214 aa15.17■□□□□ 0.02
SNHG4-204ENST00000507197 CABYRO75952 493 aa15.17■□□□□ 0.02
SNHG4-204ENST00000507197 PDE1AP54750 535 aa15.17■□□□□ 0.02
SNHG4-204ENST00000507197 NKX3-2P78367 333 aa15.17■□□□□ 0.02
SNHG4-204ENST00000507197 CNTN2Q02246 1040 aa15.17■□□□□ 0.02
SNHG4-204ENST00000507197 HDAC1Q13547 482 aaPredicted RBP15.17■□□□□ 0.02
SNHG4-204ENST00000507197 AAMPQ13685 434 aa15.17■□□□□ 0.02
SNHG4-204ENST00000507197 MCMDC2Q4G0Z9 681 aa15.17■□□□□ 0.02
SNHG4-204ENST00000507197 CCDC129Q6ZRS4 1044 aa15.17■□□□□ 0.02
SNHG4-204ENST00000507197 IL17RBQ9NRM6 502 aa15.17■□□□□ 0.02
SNHG4-204ENST00000507197 PRR12Q9ULL5 1215 aa15.17■□□□□ 0.02
SNHG4-204ENST00000507197 SMCHD1A6NHR9 2005 aa15.17■□□□□ 0.02
SNHG4-204ENST00000507197 A0A0C4DFX4 3053 aa15.17■□□□□ 0.02
SNHG4-204ENST00000507197 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.16■□□□□ 0.02
SNHG4-204ENST00000507197 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.16■□□□□ 0.02
SNHG4-204ENST00000507197 MYADML2A6NDP7 307 aa15.16■□□□□ 0.02
SNHG4-204ENST00000507197 FOXP2O15409 715 aa15.16■□□□□ 0.02
SNHG4-204ENST00000507197 ICAM1P05362 532 aa15.16■□□□□ 0.02
SNHG4-204ENST00000507197 FGRP09769 529 aa15.16■□□□□ 0.02
SNHG4-204ENST00000507197 PCP11498 1178 aaKnown RBP15.16■□□□□ 0.02
SNHG4-204ENST00000507197 NOVP48745 357 aa15.16■□□□□ 0.02
SNHG4-204ENST00000507197 CDK7P50613 346 aa15.16■□□□□ 0.02
SNHG4-204ENST00000507197 MFAP1P55081 439 aaKnown RBP15.16■□□□□ 0.02
SNHG4-204ENST00000507197 PPIGQ13427 754 aaKnown RBP eCLIP15.16■□□□□ 0.029e-10■□□□□ 10.7
SNHG4-204ENST00000507197 CCDC96Q2M329 555 aa15.16■□□□□ 0.02
SNHG4-204ENST00000507197 MFSD5Q6N075 450 aa15.16■□□□□ 0.02
SNHG4-204ENST00000507197 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.16■□□□□ 0.028e-76■■■■□ 24.7
SNHG4-204ENST00000507197 TMEM199Q8N511 208 aa15.16■□□□□ 0.02
SNHG4-204ENST00000507197 CDX2Q99626 313 aaPredicted RBP15.16■□□□□ 0.02
SNHG4-204ENST00000507197 KATNBL1Q9H079 304 aa15.16■□□□□ 0.02
SNHG4-204ENST00000507197 AP5M1Q9H0R1 490 aa15.16■□□□□ 0.02
SNHG4-204ENST00000507197 TBX21Q9UL17 535 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms