RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 CLEC10AQ8IUN9 316 aa12.62□□□□□ -0.39
CPNE4-206ENST00000505957 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
CPNE4-206ENST00000505957 NUP133Q8WUM0 1156 aa12.62□□□□□ -0.39
CPNE4-206ENST00000505957 ARMT1Q9H993 441 aa12.62□□□□□ -0.39
CPNE4-206ENST00000505957 ZNF214Q9UL59 606 aaPredicted RBP12.62□□□□□ -0.39
CPNE4-206ENST00000505957 PPP1R9AQ9ULJ8 1098 aa12.62□□□□□ -0.39
CPNE4-206ENST00000505957 CNPY2Q9Y2B0 182 aa12.62□□□□□ -0.39
CPNE4-206ENST00000505957 VCANP13611 3396 aa12.62□□□□□ -0.39
CPNE4-206ENST00000505957 SPTBN5Q9NRC6 3674 aaKnown RBP12.61□□□□□ -0.39
CPNE4-206ENST00000505957 DCDC2CA8MYV0 355 aa12.61□□□□□ -0.39
CPNE4-206ENST00000505957 SLC27A2O14975 620 aa12.61□□□□□ -0.39
CPNE4-206ENST00000505957 EEF2P13639 858 aaKnown RBP12.61□□□□□ -0.39
CPNE4-206ENST00000505957 PSMA5P28066 241 aa12.61□□□□□ -0.39
CPNE4-206ENST00000505957 GRIN2CQ14957 1233 aa12.61□□□□□ -0.39
CPNE4-206ENST00000505957 C16orf86Q6ZW13 317 aa12.61□□□□□ -0.39
CPNE4-206ENST00000505957 AMOTL1Q8IY63 956 aa12.61□□□□□ -0.39
CPNE4-206ENST00000505957 KLHDC9Q8NEP7 349 aa12.61□□□□□ -0.39
CPNE4-206ENST00000505957 REPS2Q8NFH8 660 aa12.61□□□□□ -0.39
CPNE4-206ENST00000505957 TTC14Q96N46 770 aa12.61□□□□□ -0.39
CPNE4-206ENST00000505957 ALDH8A1Q9H2A2 487 aaPredicted RBP12.61□□□□□ -0.39
CPNE4-206ENST00000505957 ZSWIM6Q9HCJ5 1215 aa12.61□□□□□ -0.39
CPNE4-206ENST00000505957 GOPCQ9HD26 462 aa12.61□□□□□ -0.39
CPNE4-206ENST00000505957 STARD7Q9NQZ5 370 aa12.61□□□□□ -0.39
CPNE4-206ENST00000505957 FBXO28Q9NVF7 368 aa12.61□□□□□ -0.39
CPNE4-206ENST00000505957 SYNGAP1Q96PV0 1343 aa12.61□□□□□ -0.39
CPNE4-206ENST00000505957 PRKAB2O43741 272 aa12.6□□□□□ -0.39
CPNE4-206ENST00000505957 TIMP1P01033 207 aa12.6□□□□□ -0.39
CPNE4-206ENST00000505957 DNAJB2P25686 324 aa12.6□□□□□ -0.39
CPNE4-206ENST00000505957 NEK4P51957 841 aa12.6□□□□□ -0.39
CPNE4-206ENST00000505957 ACLYP53396 1101 aa12.6□□□□□ -0.39
CPNE4-206ENST00000505957 CUL4AQ13619 759 aa12.6□□□□□ -0.39
CPNE4-206ENST00000505957 TJAP1Q5JTD0 557 aa12.6□□□□□ -0.39
CPNE4-206ENST00000505957 CCSAPQ6IQ19 270 aaPredicted RBP12.6□□□□□ -0.39
CPNE4-206ENST00000505957 CCDC174Q6PII3 467 aa12.6□□□□□ -0.39
CPNE4-206ENST00000505957 SAMD1Q6SPF0 538 aaPredicted RBP12.6□□□□□ -0.39
CPNE4-206ENST00000505957 MAMDC4Q6UXC1 1216 aa12.6□□□□□ -0.39
CPNE4-206ENST00000505957 OSBP2Q969R2 916 aa12.6□□□□□ -0.39
CPNE4-206ENST00000505957 ZNF576Q9H609 170 aa12.6□□□□□ -0.39
CPNE4-206ENST00000505957 CHMP5Q9NZZ3 219 aa12.6□□□□□ -0.39
CPNE4-206ENST00000505957 FAM184BQ9ULE4 1060 aa12.6□□□□□ -0.39
CPNE4-206ENST00000505957 ELP1O95163 1332 aa12.6□□□□□ -0.39
CPNE4-206ENST00000505957 ZMYM6O95789 1325 aa12.6□□□□□ -0.39
CPNE4-206ENST00000505957 MROH7Q68CQ1 1323 aa12.6□□□□□ -0.39
CPNE4-206ENST00000505957 SMCHD1A6NHR9 2005 aa12.59□□□□□ -0.39
CPNE4-206ENST00000505957 USP17L12C9JPN9 530 aa12.59□□□□□ -0.39
CPNE4-206ENST00000505957 USP17L21D6R901 530 aa12.59□□□□□ -0.39
CPNE4-206ENST00000505957 DUSP11O75319 330 aaKnown RBP12.59□□□□□ -0.39
CPNE4-206ENST00000505957 MBD4O95243 580 aa12.59□□□□□ -0.39
CPNE4-206ENST00000505957 CST5P28325 142 aaPredicted RBP12.59□□□□□ -0.39
CPNE4-206ENST00000505957 VPS53Q5VIR6 699 aa12.59□□□□□ -0.39
CPNE4-206ENST00000505957 MFSD5Q6N075 450 aa12.59□□□□□ -0.39
CPNE4-206ENST00000505957 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.59□□□□□ -0.39
CPNE4-206ENST00000505957 ZNF467Q7Z7K2 595 aaPredicted RBP12.59□□□□□ -0.39
CPNE4-206ENST00000505957 TIFAQ96CG3 184 aa12.59□□□□□ -0.39
CPNE4-206ENST00000505957 INTS4Q96HW7 963 aaKnown RBP12.59□□□□□ -0.39
CPNE4-206ENST00000505957 SEC62Q99442 399 aaKnown RBP12.59□□□□□ -0.39
CPNE4-206ENST00000505957 TEX13BQ9BXU2 312 aa12.59□□□□□ -0.39
CPNE4-206ENST00000505957 TBX21Q9UL17 535 aa12.59□□□□□ -0.39
CPNE4-206ENST00000505957 SYNRGQ9UMZ2 1314 aa12.59□□□□□ -0.39
CPNE4-206ENST00000505957 DNAJC25-GNG10A0A024R161 153 aa12.58□□□□□ -0.4
CPNE4-206ENST00000505957 CYP2D7A0A087X1C5 515 aa12.58□□□□□ -0.4
CPNE4-206ENST00000505957 M0R2C6 588 aa12.58□□□□□ -0.4
CPNE4-206ENST00000505957 ATP2A1O14983 1001 aa12.58□□□□□ -0.4
CPNE4-206ENST00000505957 SNAI1O95863 264 aaPredicted RBP12.58□□□□□ -0.4
CPNE4-206ENST00000505957 HSPD1P10809 573 aaKnown RBP12.58□□□□□ -0.4
CPNE4-206ENST00000505957 CDK7P50613 346 aa12.58□□□□□ -0.4
CPNE4-206ENST00000505957 PPIGQ13427 754 aaKnown RBP eCLIP12.58□□□□□ -0.4
CPNE4-206ENST00000505957 KCNA10Q16322 511 aa12.58□□□□□ -0.4
CPNE4-206ENST00000505957 FAM83BQ5T0W9 1011 aa12.58□□□□□ -0.4
CPNE4-206ENST00000505957 RASIP1Q5U651 963 aa12.58□□□□□ -0.4
CPNE4-206ENST00000505957 CCDC129Q6ZRS4 1044 aa12.58□□□□□ -0.4
CPNE4-206ENST00000505957 PCSK9Q8NBP7 692 aaKnown RBP12.58□□□□□ -0.4
CPNE4-206ENST00000505957 LENG1Q96BZ8 264 aaPredicted RBP12.58□□□□□ -0.4
CPNE4-206ENST00000505957 GLT1D1Q96MS3 346 aa12.58□□□□□ -0.4
CPNE4-206ENST00000505957 SLF1Q9BQI6 1058 aa12.58□□□□□ -0.4
CPNE4-206ENST00000505957 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.58□□□□□ -0.4
CPNE4-206ENST00000505957 CDH23Q9H251 3354 aa12.58□□□□□ -0.4
CPNE4-206ENST00000505957 PARP14Q460N5 1801 aa12.58□□□□□ -0.4
CPNE4-206ENST00000505957 ZNFX1Q9P2E3 1918 aaKnown RBP12.57□□□□□ -0.4
CPNE4-206ENST00000505957 SMIM22K7EJ46 135 aa12.57□□□□□ -0.4
CPNE4-206ENST00000505957 TNFRSF10AO00220 468 aa12.57□□□□□ -0.4
CPNE4-206ENST00000505957 CHGBP05060 677 aa12.57□□□□□ -0.4
CPNE4-206ENST00000505957 AKNAD1Q5T1N1 836 aa12.57□□□□□ -0.4
CPNE4-206ENST00000505957 CTR9Q6PD62 1173 aa12.57□□□□□ -0.4
CPNE4-206ENST00000505957 RUFY3Q7L099 469 aa12.57□□□□□ -0.4
CPNE4-206ENST00000505957 PRPF38AQ8NAV1 312 aaKnown RBP12.57□□□□□ -0.4
CPNE4-206ENST00000505957 USP38Q8NB14 1042 aa12.57□□□□□ -0.4
CPNE4-206ENST00000505957 DDX11Q96FC9 970 aa12.57□□□□□ -0.4
CPNE4-206ENST00000505957 TMX3Q96JJ7 454 aa12.57□□□□□ -0.4
CPNE4-206ENST00000505957 ANP32EQ9BTT0 268 aa12.57□□□□□ -0.4
CPNE4-206ENST00000505957 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.57□□□□□ -0.4
CPNE4-206ENST00000505957 SLKQ9H2G2 1235 aaPredicted RBP12.57□□□□□ -0.4
CPNE4-206ENST00000505957 NYAP2Q9P242 653 aa12.57□□□□□ -0.4
CPNE4-206ENST00000505957 CTNNA3Q9UI47 895 aa12.57□□□□□ -0.4
CPNE4-206ENST00000505957 CYP46A1Q9Y6A2 500 aa12.57□□□□□ -0.4
CPNE4-206ENST00000505957 GPAA1O43292 621 aa12.56□□□□□ -0.4
CPNE4-206ENST00000505957 HMGB1P09429 215 aaKnown RBP12.56□□□□□ -0.4
CPNE4-206ENST00000505957 CASTP20810 708 aaKnown RBP12.56□□□□□ -0.4
CPNE4-206ENST00000505957 GJA9P57773 515 aa12.56□□□□□ -0.4
CPNE4-206ENST00000505957 NKX3-2P78367 333 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms