RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 ATP8A1Q9Y2Q0 1164 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 PCDHGC5Q9Y5F6 944 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 U3KQE9 123 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 PSPNO60542 156 aa5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 ACRP10323 421 aa5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 MYCLP1P12525 358 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 SOX5P35711 763 aa5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 CCNFP41002 786 aa5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 CDK8P49336 464 aa5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 ZNF143P52747 638 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 INPP5AQ14642 412 aa5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 SLC10A6Q3KNW5 377 aa5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 GNPTABQ3T906 1256 aa5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 ODR4Q5SWX8 454 aa5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 RNF214Q8ND24 703 aa5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 JDP2Q8WYK2 163 aa5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 DHRS1Q96LJ7 313 aa5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 DUSP23Q9BVJ7 150 aa5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 DCP1AQ9NPI6 582 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 SMG5Q9UPR3 1016 aaKnown RBP5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 SUGT1Q9Y2Z0 365 aa5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 CORINQ9Y5Q5 1042 aa5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 LTBP3Q9NS15 1303 aa5.29□□□□□ -1.56
TRAPPC13-208ENST00000505553 ALG1L2C9J202 215 aa5.28□□□□□ -1.56
TRAPPC13-208ENST00000505553 ADCY3O60266 1144 aa5.28□□□□□ -1.56
TRAPPC13-208ENST00000505553 LEFTY1O75610 366 aa5.28□□□□□ -1.56
TRAPPC13-208ENST00000505553 STAT3P40763 770 aa5.28□□□□□ -1.56
TRAPPC13-208ENST00000505553 LINC00310P59036 64 aa5.28□□□□□ -1.56
TRAPPC13-208ENST00000505553 ERVK-24P63145 666 aa5.28□□□□□ -1.56
TRAPPC13-208ENST00000505553 EXOSC10Q01780 885 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-208ENST00000505553 PABPC4Q13310 644 aaKnown RBP eCLIP5.28□□□□□ -1.56
TRAPPC13-208ENST00000505553 ZYXQ15942 572 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-208ENST00000505553 ZC3H12AQ5D1E8 599 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-208ENST00000505553 DHX37Q8IY37 1157 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-208ENST00000505553 ISL2Q96A47 359 aa5.28□□□□□ -1.56
TRAPPC13-208ENST00000505553 SLC9A7Q96T83 725 aa5.28□□□□□ -1.56
TRAPPC13-208ENST00000505553 KIF2CQ99661 725 aa5.28□□□□□ -1.56
TRAPPC13-208ENST00000505553 PICK1Q9NRD5 415 aa5.28□□□□□ -1.56
TRAPPC13-208ENST00000505553 MCM8Q9UJA3 840 aa5.28□□□□□ -1.56
TRAPPC13-208ENST00000505553 ZNF214Q9UL59 606 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC13-208ENST00000505553 PLD2O14939 933 aa5.27□□□□□ -1.57
TRAPPC13-208ENST00000505553 PGRP06401 933 aa5.27□□□□□ -1.57
TRAPPC13-208ENST00000505553 RAG1P15918 1043 aa5.27□□□□□ -1.57
TRAPPC13-208ENST00000505553 PMLP29590 882 aa5.27□□□□□ -1.57
TRAPPC13-208ENST00000505553 YARSP54577 528 aaKnown RBP5.27□□□□□ -1.57
TRAPPC13-208ENST00000505553 C21orf62-AS1Q17RA5 79 aa5.27□□□□□ -1.57
TRAPPC13-208ENST00000505553 FNDC3BQ53EP0 1204 aaKnown RBP5.27□□□□□ -1.57
TRAPPC13-208ENST00000505553 THNSL2Q86YJ6 484 aa5.27□□□□□ -1.57
TRAPPC13-208ENST00000505553 TOP6BLQ8N6T0 577 aa5.27□□□□□ -1.57
TRAPPC13-208ENST00000505553 CCDC120Q96HB5 630 aa5.27□□□□□ -1.57
TRAPPC13-208ENST00000505553 CDC6Q99741 560 aa5.27□□□□□ -1.57
TRAPPC13-208ENST00000505553 IER2Q9BTL4 223 aa5.27□□□□□ -1.57
TRAPPC13-208ENST00000505553 GEMIN8Q9NWZ8 242 aaKnown RBP5.27□□□□□ -1.57
TRAPPC13-208ENST00000505553 KLHL3Q9UH77 587 aa5.27□□□□□ -1.57
TRAPPC13-208ENST00000505553 GTF2IRD1Q9UHL9 959 aa5.27□□□□□ -1.57
TRAPPC13-208ENST00000505553 TCEAL9Q9UHQ7 104 aa5.27□□□□□ -1.57
TRAPPC13-208ENST00000505553 PCDHB10Q9UN67 800 aa5.27□□□□□ -1.57
TRAPPC13-208ENST00000505553 ETV2O00321 342 aaPredicted RBP5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 KCNQ2O43526 872 aa5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 NEFMP07197 916 aa5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 CPEP16870 476 aa5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 GDNFP39905 211 aa5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 NFKB2Q00653 900 aa5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 HSP90AA2PQ14568 343 aaPredicted RBP5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 NFIXQ14938 502 aa5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 SV2CQ496J9 727 aa5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 WWC2Q6AWC2 1192 aa5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 FMNL3Q8IVF7 1028 aa5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 CCAR1Q8IX12 1150 aaKnown RBP5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 KLHL6Q8WZ60 621 aa5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 KCNN1Q92952 543 aa5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 PSMD1Q99460 953 aa5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 DHRS4Q9BTZ2 278 aa5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 MAGEC2Q9UBF1 373 aaPredicted RBP5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 MAPRE3Q9UPY8 281 aa5.26□□□□□ -1.57
TRAPPC13-208ENST00000505553 TRAV20A0A0B4J274 112 aa5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 PRAMEF27A3QJZ7 478 aa5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 DCDC2CA8MYV0 355 aa5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 IRS4O14654 1257 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 PDE8AO60658 829 aa5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 BMP7P18075 431 aa5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 GRK4P32298 578 aa5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 ETF1P62495 437 aaKnown RBP5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 CDC37L1Q7L3B6 337 aa5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 JAMLQ86YT9 394 aa5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 CERS3Q8IU89 383 aa5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 SCUBE1Q8IWY4 988 aa5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 SLFN12Q8IYM2 578 aa5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 KISS1RQ969F8 398 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 APBA2Q99767 749 aa5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 WNT10AQ9GZT5 417 aa5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 TMPRSS5Q9H3S3 457 aa5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 NCOA5Q9HCD5 579 aaKnown RBP5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 CSADQ9Y600 493 aa5.25□□□□□ -1.57
TRAPPC13-208ENST00000505553 A0A087X0B3 334 aa5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 A0A0G2JLL6 359 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 ANKRD34BA5PLL1 514 aa5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 PLEKHD1A6NEE1 506 aa5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 FAM86C2PA6NEL3 165 aa5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 CHURC1-FNTBB4DL54 471 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 606.2 ms