RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 GRXCR1A8MXD5 290 aa15.64■□□□□ 0.09
DDX41-204ENST00000504807 STRNO43815 780 aa15.64■□□□□ 0.09
DDX41-204ENST00000504807 RAG1P15918 1043 aa15.64■□□□□ 0.09
DDX41-204ENST00000504807 STAT3P40763 770 aa15.64■□□□□ 0.09
DDX41-204ENST00000504807 FPGSQ05932 587 aa15.64■□□□□ 0.09
DDX41-204ENST00000504807 ZNF792Q3KQV3 632 aa15.64■□□□□ 0.09
DDX41-204ENST00000504807 ZNF444Q8N0Y2 327 aaPredicted RBP15.64■□□□□ 0.09
DDX41-204ENST00000504807 LENG1Q96BZ8 264 aaPredicted RBP15.64■□□□□ 0.09
DDX41-204ENST00000504807 EVI5LQ96CN4 794 aa15.64■□□□□ 0.09
DDX41-204ENST00000504807 FGD4Q96M96 766 aa15.64■□□□□ 0.09
DDX41-204ENST00000504807 FAM86C2PA6NEL3 165 aa15.63■□□□□ 0.09
DDX41-204ENST00000504807 KCNQ1P51787 676 aa15.63■□□□□ 0.09
DDX41-204ENST00000504807 NMIQ13287 307 aaPredicted RBP15.63■□□□□ 0.09
DDX41-204ENST00000504807 PLEKHM2Q8IWE5 1019 aa15.63■□□□□ 0.09
DDX41-204ENST00000504807 ABRAQ8N0Z2 381 aa15.63■□□□□ 0.09
DDX41-204ENST00000504807 MICALL1Q8N3F8 863 aa15.63■□□□□ 0.09
DDX41-204ENST00000504807 MMP19Q99542 508 aa15.63■□□□□ 0.09
DDX41-204ENST00000504807 PBX4Q9BYU1 374 aa15.63■□□□□ 0.09
DDX41-204ENST00000504807 RAVER2Q9HCJ3 691 aaKnown RBP15.63■□□□□ 0.09
DDX41-204ENST00000504807 CXXC1Q9P0U4 656 aaPredicted RBP15.63■□□□□ 0.09
DDX41-204ENST00000504807 ZNFX1Q9P2E3 1918 aaKnown RBP15.62■□□□□ 0.09
DDX41-204ENST00000504807 TTLL1O95922 423 aa15.62■□□□□ 0.09
DDX41-204ENST00000504807 CLTBP09497 229 aa15.62■□□□□ 0.09
DDX41-204ENST00000504807 FCER1AP12319 257 aa15.62■□□□□ 0.09
DDX41-204ENST00000504807 SNAP25P60880 206 aa15.62■□□□□ 0.09
DDX41-204ENST00000504807 SNRNP48Q6IEG0 339 aaKnown RBP15.62■□□□□ 0.09
DDX41-204ENST00000504807 GMCL1P1Q8NEA9 526 aa15.62■□□□□ 0.09
DDX41-204ENST00000504807 KIFC2Q96AC6 838 aa15.62■□□□□ 0.09
DDX41-204ENST00000504807 TSPYL2Q9H2G4 693 aaPredicted RBP15.62■□□□□ 0.09
DDX41-204ENST00000504807 PLXNA1Q9UIW2 1896 aa15.62■□□□□ 0.09
DDX41-204ENST00000504807 DNAJC25-GNG10A0A024R161 153 aa15.61■□□□□ 0.09
DDX41-204ENST00000504807 SLC25A27O95847 323 aa15.61■□□□□ 0.09
DDX41-204ENST00000504807 TSPY3P0CV98 308 aa15.61■□□□□ 0.09
DDX41-204ENST00000504807 TSPY8P0CW00 308 aa15.61■□□□□ 0.09
DDX41-204ENST00000504807 NOVP48745 357 aa15.61■□□□□ 0.09
DDX41-204ENST00000504807 MRE11P49959 708 aa15.61■□□□□ 0.09
DDX41-204ENST00000504807 IRX5P78411 483 aaPredicted RBP15.61■□□□□ 0.09
DDX41-204ENST00000504807 NUCB1Q02818 461 aa15.61■□□□□ 0.09
DDX41-204ENST00000504807 SLFN13Q68D06 897 aa15.61■□□□□ 0.09
DDX41-204ENST00000504807 CHD1LQ86WJ1 897 aa15.61■□□□□ 0.09
DDX41-204ENST00000504807 CPXCR1Q8N123 301 aa15.61■□□□□ 0.09
DDX41-204ENST00000504807 NACAP1Q9BZK3 213 aa15.61■□□□□ 0.09
DDX41-204ENST00000504807 IL25Q9H293 177 aa15.61■□□□□ 0.09
DDX41-204ENST00000504807 SLC38A10Q9HBR0 1119 aa15.61■□□□□ 0.09
DDX41-204ENST00000504807 ANAPC4Q9UJX5 808 aa15.61■□□□□ 0.09
DDX41-204ENST00000504807 DDX49Q9Y6V7 483 aaKnown RBP15.61■□□□□ 0.09
DDX41-204ENST00000504807 ZNF536O15090 1300 aa15.61■□□□□ 0.09
DDX41-204ENST00000504807 TCF20Q9UGU0 1960 aaKnown RBP15.6■□□□□ 0.09
DDX41-204ENST00000504807 SEPT4O43236 478 aa15.6■□□□□ 0.09
DDX41-204ENST00000504807 ADCY6O43306 1168 aa15.6■□□□□ 0.09
DDX41-204ENST00000504807 PQBP1O60828 265 aaKnown RBP15.6■□□□□ 0.09
DDX41-204ENST00000504807 FGAP02671 866 aa15.6■□□□□ 0.09
DDX41-204ENST00000504807 FGRP09769 529 aa15.6■□□□□ 0.09
DDX41-204ENST00000504807 ZNF865P0CJ78 1059 aaPredicted RBP15.6■□□□□ 0.09
DDX41-204ENST00000504807 SLC4A3P48751 1232 aa15.6■□□□□ 0.09
DDX41-204ENST00000504807 LRRFIP1Q32MZ4 808 aaKnown RBP15.6■□□□□ 0.09
DDX41-204ENST00000504807 TBC1D10CQ8IV04 446 aa15.6■□□□□ 0.09
DDX41-204ENST00000504807 PRPF38AQ8NAV1 312 aaKnown RBP15.6■□□□□ 0.09
DDX41-204ENST00000504807 TEX13BQ9BXU2 312 aa15.6■□□□□ 0.09
DDX41-204ENST00000504807 C11orf16Q9NQ32 467 aa15.6■□□□□ 0.09
DDX41-204ENST00000504807 HELLSQ9NRZ9 838 aa15.6■□□□□ 0.09
DDX41-204ENST00000504807 ATP2A1O14983 1001 aa15.59■□□□□ 0.09
DDX41-204ENST00000504807 KIAA0355O15063 1070 aa15.59■□□□□ 0.09
DDX41-204ENST00000504807 SNAI1O95863 264 aaPredicted RBP15.59■□□□□ 0.09
DDX41-204ENST00000504807 HSPD1P10809 573 aaKnown RBP15.59■□□□□ 0.09
DDX41-204ENST00000504807 MCCP23508 829 aa15.59■□□□□ 0.09
DDX41-204ENST00000504807 PDE4AP27815 886 aa15.59■□□□□ 0.09
DDX41-204ENST00000504807 PDE4BQ07343 736 aa15.59■□□□□ 0.09
DDX41-204ENST00000504807 SKIV2LQ15477 1246 aaKnown RBP15.59■□□□□ 0.09
DDX41-204ENST00000504807 ALX1Q15699 326 aa15.59■□□□□ 0.09
DDX41-204ENST00000504807 C1orf53Q5VUE5 145 aa15.59■□□□□ 0.09
DDX41-204ENST00000504807 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.59■□□□□ 0.094e-9■■□□□ 12.9
DDX41-204ENST00000504807 TINF2Q9BSI4 451 aa15.59■□□□□ 0.09
DDX41-204ENST00000504807 TMEM39AQ9NV64 488 aa15.59■□□□□ 0.09
DDX41-204ENST00000504807 SUPT16HQ9Y5B9 1047 aaKnown RBP15.59■□□□□ 0.09
DDX41-204ENST00000504807 CACNA1AO00555 2505 aa15.59■□□□□ 0.09
DDX41-204ENST00000504807 TMEM232C9JQI7 657 aa15.58■□□□□ 0.08
DDX41-204ENST00000504807 BMP3P12645 472 aa15.58■□□□□ 0.08
DDX41-204ENST00000504807 SDSP20132 328 aa15.58■□□□□ 0.08
DDX41-204ENST00000504807 HAND2P61296 217 aa15.58■□□□□ 0.08
DDX41-204ENST00000504807 IRX6P78412 446 aaPredicted RBP15.58■□□□□ 0.08
DDX41-204ENST00000504807 KCTD2Q14681 263 aa15.58■□□□□ 0.08
DDX41-204ENST00000504807 LRRC41Q15345 812 aa15.58■□□□□ 0.08
DDX41-204ENST00000504807 AAK1Q2M2I8 961 aa15.58■□□□□ 0.08
DDX41-204ENST00000504807 MCMDC2Q4G0Z9 681 aa15.58■□□□□ 0.08
DDX41-204ENST00000504807 KCTD1Q719H9 257 aa15.58■□□□□ 0.08
DDX41-204ENST00000504807 KHSRPQ92945 711 aaKnown RBP eCLIP15.58■□□□□ 0.08
DDX41-204ENST00000504807 RILPL2Q969X0 211 aa15.58■□□□□ 0.08
DDX41-204ENST00000504807 GMCL1Q96IK5 515 aa15.58■□□□□ 0.08
DDX41-204ENST00000504807 AGBL1Q96MI9 1066 aa15.58■□□□□ 0.08
DDX41-204ENST00000504807 FEM1BQ9UK73 627 aa15.58■□□□□ 0.08
DDX41-204ENST00000504807 SYNPO2Q9UMS6 1093 aa15.58■□□□□ 0.08
DDX41-204ENST00000504807 ASTN1O14525 1302 aa15.58■□□□□ 0.08
DDX41-204ENST00000504807 REV3LO60673 3130 aa15.57■□□□□ 0.08
DDX41-204ENST00000504807 TSPY2A6NKD2 308 aa15.57■□□□□ 0.08
DDX41-204ENST00000504807 TRIM6-TRIM34B2RNG4 842 aa15.57■□□□□ 0.08
DDX41-204ENST00000504807 ORC4O43929 436 aa15.57■□□□□ 0.08
DDX41-204ENST00000504807 GPR37L1O60883 481 aa15.57■□□□□ 0.08
DDX41-204ENST00000504807 PGK1P00558 417 aa15.57■□□□□ 0.08
DDX41-204ENST00000504807 PTGS1P23219 599 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms