RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 FAM86C1Q9NVL1 165 aa15.31■□□□□ 0.04
LSM6-204ENST00000504181 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.31■□□□□ 0.04
LSM6-204ENST00000504181 MTUS1Q9ULD2 1270 aa15.31■□□□□ 0.04
LSM6-204ENST00000504181 GRIN2DO15399 1336 aa15.31■□□□□ 0.04
LSM6-204ENST00000504181 LCHNA4D1U4 455 aa15.3■□□□□ 0.04
LSM6-204ENST00000504181 PLCD1P51178 756 aa15.3■□□□□ 0.04
LSM6-204ENST00000504181 CACNA1BQ00975 2339 aa15.3■□□□□ 0.04
LSM6-204ENST00000504181 TTC6Q86TZ1 520 aa15.3■□□□□ 0.04
LSM6-204ENST00000504181 CLEC10AQ8IUN9 316 aa15.3■□□□□ 0.04
LSM6-204ENST00000504181 PHOSPHO2Q8TCD6 241 aa15.3■□□□□ 0.04
LSM6-204ENST00000504181 FBXO28Q9NVF7 368 aa15.3■□□□□ 0.04
LSM6-204ENST00000504181 MYH4Q9Y623 1939 aa15.3■□□□□ 0.04
LSM6-204ENST00000504181 H3BQ06 376 aaPredicted RBP15.29■□□□□ 0.04
LSM6-204ENST00000504181 ABCB7O75027 752 aa15.29■□□□□ 0.04
LSM6-204ENST00000504181 UQCRFS1P1P0C7P4 283 aa15.29■□□□□ 0.04
LSM6-204ENST00000504181 PSMC6P62333 389 aa15.29■□□□□ 0.04
LSM6-204ENST00000504181 MIGA1Q8NAN2 632 aa15.29■□□□□ 0.04
LSM6-204ENST00000504181 DDX11Q96FC9 970 aa15.29■□□□□ 0.04
LSM6-204ENST00000504181 ABHD16BQ9H3Z7 469 aa15.29■□□□□ 0.04
LSM6-204ENST00000504181 ZNF214Q9UL59 606 aaPredicted RBP15.29■□□□□ 0.04
LSM6-204ENST00000504181 PTPRZ1P23471 2315 aaPredicted RBP15.28■□□□□ 0.04
LSM6-204ENST00000504181 ASTN1O14525 1302 aa15.28■□□□□ 0.04
LSM6-204ENST00000504181 CABYRO75952 493 aa15.28■□□□□ 0.04
LSM6-204ENST00000504181 CYP2C9P11712 490 aa15.28■□□□□ 0.04
LSM6-204ENST00000504181 CYP7A1P22680 504 aa15.28■□□□□ 0.04
LSM6-204ENST00000504181 ZP2Q05996 745 aa15.28■□□□□ 0.04
LSM6-204ENST00000504181 TCF15Q12870 199 aa15.28■□□□□ 0.04
LSM6-204ENST00000504181 ADAMTS5Q9UNA0 930 aa15.28■□□□□ 0.04
LSM6-204ENST00000504181 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.27■□□□□ 0.04
LSM6-204ENST00000504181 VWA5AO00534 786 aa15.27■□□□□ 0.04
LSM6-204ENST00000504181 WDR46O15213 610 aaKnown RBP15.27■□□□□ 0.04
LSM6-204ENST00000504181 CYP2E1P05181 493 aaPredicted RBP15.27■□□□□ 0.04
LSM6-204ENST00000504181 COPB2P35606 906 aa15.27■□□□□ 0.04
LSM6-204ENST00000504181 EVX2Q03828 476 aa15.27■□□□□ 0.04
LSM6-204ENST00000504181 PUS10Q3MIT2 529 aaKnown RBP15.27■□□□□ 0.04
LSM6-204ENST00000504181 CCDC184Q52MB2 194 aa15.27■□□□□ 0.04
LSM6-204ENST00000504181 NOL8Q76FK4 1167 aaKnown RBP15.27■□□□□ 0.04
LSM6-204ENST00000504181 TMCO2Q7Z6W1 182 aaPredicted RBP15.27■□□□□ 0.04
LSM6-204ENST00000504181 VCPKMTQ9H867 229 aa15.27■□□□□ 0.04
LSM6-204ENST00000504181 SUGCTQ9HAC7 445 aa15.27■□□□□ 0.04
LSM6-204ENST00000504181 LCTP09848 1927 aa15.27■□□□□ 0.03
LSM6-204ENST00000504181 DMDP11532 3685 aa15.26■□□□□ 0.03
LSM6-204ENST00000504181 SCN10AQ9Y5Y9 1956 aa15.26■□□□□ 0.03
LSM6-204ENST00000504181 DNAJC25-GNG10A0A024R161 153 aa15.26■□□□□ 0.03
LSM6-204ENST00000504181 PTGS1P23219 599 aa15.26■□□□□ 0.03
LSM6-204ENST00000504181 IRS1P35568 1242 aa15.26■□□□□ 0.03
LSM6-204ENST00000504181 NKX3-2P78367 333 aa15.26■□□□□ 0.03
LSM6-204ENST00000504181 TTC39AQ5SRH9 613 aa15.26■□□□□ 0.03
LSM6-204ENST00000504181 ARMCX2Q7L311 632 aa15.26■□□□□ 0.03
LSM6-204ENST00000504181 REPS2Q8NFH8 660 aa15.26■□□□□ 0.03
LSM6-204ENST00000504181 NEK9Q8TD19 979 aa15.26■□□□□ 0.03
LSM6-204ENST00000504181 FTOQ9C0B1 505 aaKnown RBP eCLIP15.26■□□□□ 0.03
LSM6-204ENST00000504181 ARHGEF10LQ9HCE6 1279 aa15.26■□□□□ 0.03
LSM6-204ENST00000504181 TRMT13Q9NUP7 481 aaKnown RBP15.26■□□□□ 0.03
LSM6-204ENST00000504181 MUTYHQ9UIF7 546 aa15.26■□□□□ 0.03
LSM6-204ENST00000504181 CACNA1HO95180 2353 aa15.26■□□□□ 0.03
LSM6-204ENST00000504181 MICAL3Q7RTP6 2002 aa15.26■□□□□ 0.03
LSM6-204ENST00000504181 COL4A6Q14031 1691 aa15.25■□□□□ 0.03
LSM6-204ENST00000504181 C19orf67A6NJJ6 358 aa15.25■□□□□ 0.03
LSM6-204ENST00000504181 POLR3DP05423 398 aaPredicted RBP15.25■□□□□ 0.03
LSM6-204ENST00000504181 SLC4A3P48751 1232 aa15.25■□□□□ 0.03
LSM6-204ENST00000504181 TNFAIP2Q03169 654 aa15.25■□□□□ 0.03
LSM6-204ENST00000504181 FSCN1Q16658 493 aaKnown RBP15.25■□□□□ 0.03
LSM6-204ENST00000504181 SNRNP48Q6IEG0 339 aaKnown RBP15.25■□□□□ 0.03
LSM6-204ENST00000504181 TMEM179Q6ZVK1 233 aa15.25■□□□□ 0.03
LSM6-204ENST00000504181 ZNF467Q7Z7K2 595 aaPredicted RBP15.25■□□□□ 0.03
LSM6-204ENST00000504181 TLK2Q86UE8 772 aa15.25■□□□□ 0.03
LSM6-204ENST00000504181 FGD4Q96M96 766 aa15.25■□□□□ 0.03
LSM6-204ENST00000504181 UPF3BQ9BZI7 483 aaKnown RBP15.25■□□□□ 0.03
LSM6-204ENST00000504181 ALDH8A1Q9H2A2 487 aaPredicted RBP15.25■□□□□ 0.03
LSM6-204ENST00000504181 PIH1D3Q9NQM4 214 aaKnown RBP15.25■□□□□ 0.03
LSM6-204ENST00000504181 TMX2Q9Y320 296 aa15.25■□□□□ 0.03
LSM6-204ENST00000504181 MYO7AQ13402 2215 aa15.25■□□□□ 0.03
LSM6-204ENST00000504181 WDR87Q6ZQQ6 2873 aa15.25■□□□□ 0.03
LSM6-204ENST00000504181 FAM186AA6NE01 2351 aa15.25■□□□□ 0.03
LSM6-204ENST00000504181 RALGAPA2Q2PPJ7 1873 aa15.25■□□□□ 0.03
LSM6-204ENST00000504181 KCNJ6P48051 423 aa15.24■□□□□ 0.03
LSM6-204ENST00000504181 ICA1Q05084 483 aa15.24■□□□□ 0.03
LSM6-204ENST00000504181 GABPAQ06546 454 aa15.24■□□□□ 0.03
LSM6-204ENST00000504181 EP400NLQ6ZTU2 488 aa15.24■□□□□ 0.03
LSM6-204ENST00000504181 SIAH1Q8IUQ4 282 aa15.24■□□□□ 0.03
LSM6-204ENST00000504181 ADHFE1Q8IWW8 467 aa15.24■□□□□ 0.03
LSM6-204ENST00000504181 CCDC144CPQ8IYA2 1237 aa15.24■□□□□ 0.03
LSM6-204ENST00000504181 PRRX2Q99811 253 aa15.24■□□□□ 0.03
LSM6-204ENST00000504181 ZBED2Q9BTP6 218 aa15.24■□□□□ 0.03
LSM6-204ENST00000504181 SEZ6LQ9BYH1 1024 aa15.24■□□□□ 0.03
LSM6-204ENST00000504181 KATNBL1Q9H079 304 aa15.24■□□□□ 0.03
LSM6-204ENST00000504181 SH2D4AQ9H788 454 aa15.24■□□□□ 0.03
LSM6-204ENST00000504181 PRKAG3Q9UGI9 489 aa15.24■□□□□ 0.03
LSM6-204ENST00000504181 PPP1R9AQ9ULJ8 1098 aa15.24■□□□□ 0.03
LSM6-204ENST00000504181 RIPK3Q9Y572 518 aa15.24■□□□□ 0.03
LSM6-204ENST00000504181 VPS13AQ96RL7 3174 aa15.24■□□□□ 0.03
LSM6-204ENST00000504181 RIF1Q5UIP0 2472 aaKnown RBP15.23■□□□□ 0.03
LSM6-204ENST00000504181 TNKSO95271 1327 aa15.23■□□□□ 0.03
LSM6-204ENST00000504181 SRGAP3O43295 1099 aa15.23■□□□□ 0.03
LSM6-204ENST00000504181 RFC2P35250 354 aa15.23■□□□□ 0.03
LSM6-204ENST00000504181 ZAP70P43403 619 aa15.23■□□□□ 0.03
LSM6-204ENST00000504181 ERMP1Q7Z2K6 904 aa15.23■□□□□ 0.03
LSM6-204ENST00000504181 TGS1Q96RS0 853 aaKnown RBP15.23■□□□□ 0.03
LSM6-204ENST00000504181 AP5M1Q9H0R1 490 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms