RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 HDLBPQ00341 1268 aaKnown RBP4.54□□□□□ -1.68
USP46-205ENST00000504078 EXOSC9Q06265 439 aaKnown RBP4.54□□□□□ -1.68
USP46-205ENST00000504078 SPP2Q13103 211 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 DOC2BQ14184 412 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 PUM3Q15397 648 aaKnown RBP4.54□□□□□ -1.68
USP46-205ENST00000504078 TRIM60Q495X7 471 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 TPRNQ4KMQ1 711 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 CCDC184Q52MB2 194 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 INTS6LQ5JSJ4 861 aaKnown RBP4.54□□□□□ -1.68
USP46-205ENST00000504078 MAP3K21Q5TCX8 1036 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 MYSM1Q5VVJ2 828 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 FAM109BQ6ICB4 259 aaPredicted RBP4.54□□□□□ -1.68
USP46-205ENST00000504078 DZIP1Q86YF9 867 aaKnown RBP4.54□□□□□ -1.68
USP46-205ENST00000504078 MICALL1Q8N3F8 863 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 BADQ92934 168 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 RNPC3Q96LT9 517 aaKnown RBP4.54□□□□□ -1.68
USP46-205ENST00000504078 APBA2Q99767 749 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 FLRT1Q9NZU1 646 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 LIMD1Q9UGP4 676 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 GJD2Q9UKL4 321 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 CUL9Q8IWT3 2517 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 RBAK-RBAKDNI3L0D1 243 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 PDE8BO95263 885 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 IFIT1P09914 478 aaKnown RBP4.53□□□□□ -1.68
USP46-205ENST00000504078 RHOQP17081 205 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 CYP2C19P33261 490 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 CHRNA4P43681 627 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 EPHB4P54760 987 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 JAG1P78504 1218 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 PTK2Q05397 1052 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 PDE3AQ14432 1141 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 CCDC85BQ15834 202 aaPredicted RBP4.53□□□□□ -1.68
USP46-205ENST00000504078 GJC2Q5T442 439 aaPredicted RBP4.53□□□□□ -1.68
USP46-205ENST00000504078 FKBP1CQ5VVH2 108 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 HHIPL2Q6UWX4 724 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 PI16Q6UXB8 463 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 GPR142Q7Z601 462 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 KDF1Q8NAX2 398 aaPredicted RBP4.53□□□□□ -1.68
USP46-205ENST00000504078 PNMA1Q8ND90 353 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 ADAMTS19Q8TE59 1207 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 FERMT2Q96AC1 680 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 LENG1Q96BZ8 264 aaPredicted RBP4.53□□□□□ -1.68
USP46-205ENST00000504078 FAM122AQ96E09 287 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 SUV39H2Q9H5I1 410 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.53□□□□□ -1.68
USP46-205ENST00000504078 PDLIM7Q9NR12 457 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 ABCF2Q9UG63 623 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 PRKAG2Q9UGJ0 569 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 FKBPLQ9UIM3 349 aa4.53□□□□□ -1.68
USP46-205ENST00000504078 PA2G4Q9UQ80 394 aaKnown RBP4.53□□□□□ -1.68
USP46-205ENST00000504078 RLFQ13129 1914 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 MROH7-TTC4A0A0A0MT08 1334 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 GAKO14976 1311 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 CDK5RAP2Q96SN8 1893 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 FAM86C2PA6NEL3 165 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 GRXCR1A8MXD5 290 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 FGFR2P21802 821 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 ITGB8P26012 769 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 RGS2P41220 211 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 GATA4P43694 442 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 HERVK_113P62684 666 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 ERVK-9P63128 1117 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 ERVK-24P63145 666 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 MAP3K12Q12852 859 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 RASGRF1Q13972 1273 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 ATP2B3Q16720 1220 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 C1orf229Q6ZS94 237 aaPredicted RBP4.52□□□□□ -1.69
USP46-205ENST00000504078 WWC1Q8IX03 1113 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 CCAR1Q8IX12 1150 aaKnown RBP4.52□□□□□ -1.69
USP46-205ENST00000504078 GOLGA6L1Q8N7Z2 621 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 ZNF280CQ8ND82 737 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 TRPV1Q8NER1 839 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 NPLOC4Q8TAT6 608 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 WDR66Q8TBY9 1149 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 SOCS4Q8WXH5 440 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 SRCIN1Q9C0H9 1055 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 DNAJC18Q9H819 358 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 SAP30BPQ9UHR5 308 aaKnown RBP4.52□□□□□ -1.69
USP46-205ENST00000504078 SLC45A1Q9Y2W3 748 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 A0A0G2JMZ2 1700 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 DNAH12Q6ZR08 3092 aa4.52□□□□□ -1.69
USP46-205ENST00000504078 MUC3AQ02505 3323 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 TRIM43BA6NCK2 446 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 CTNND1O60716 968 aaKnown RBP4.51□□□□□ -1.69
USP46-205ENST00000504078 PQBP1O60828 265 aaKnown RBP4.51□□□□□ -1.69
USP46-205ENST00000504078 LILRA1O75019 489 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 ENTPD3O75355 529 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 VAMP4O75379 141 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 HOXB4P17483 251 aaPredicted RBP4.51□□□□□ -1.69
USP46-205ENST00000504078 AMPD1P23109 780 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 ADD1P35611 737 aaKnown RBP4.51□□□□□ -1.69
USP46-205ENST00000504078 GCLCP48506 637 aaPredicted RBP4.51□□□□□ -1.69
USP46-205ENST00000504078 CLK2P49760 499 aaKnown RBP4.51□□□□□ -1.69
USP46-205ENST00000504078 RHBDL3P58872 404 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 RAB15P59190 212 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 RABL6Q3YEC7 729 aaPredicted RBP4.51□□□□□ -1.69
USP46-205ENST00000504078 FAM47AQ5JRC9 791 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 WDR44Q5JSH3 913 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 PLEKHH3Q7Z736 793 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 PROCA1Q8NCQ7 364 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms