RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 CCL14Q16627 93 aa21.29■■□□□ 1
PDLIM7-209ENST00000503346 CCDC174Q6PII3 467 aa21.29■■□□□ 1
PDLIM7-209ENST00000503346 CATIPQ7Z7H3 387 aa21.29■■□□□ 1
PDLIM7-209ENST00000503346 NPLOC4Q8TAT6 608 aa21.29■■□□□ 1
PDLIM7-209ENST00000503346 USP26Q9BXU7 913 aa21.29■■□□□ 1
PDLIM7-209ENST00000503346 UBA5Q9GZZ9 404 aa21.29■■□□□ 1
PDLIM7-209ENST00000503346 GPHNQ9NQX3 736 aaPredicted RBP21.29■■□□□ 1
PDLIM7-209ENST00000503346 SLC5A4Q9NY91 659 aa21.29■■□□□ 1
PDLIM7-209ENST00000503346 PNMA2Q9UL42 364 aa21.29■■□□□ 1
PDLIM7-209ENST00000503346 SNX14Q9Y5W7 946 aa21.29■■□□□ 1
PDLIM7-209ENST00000503346 COL11A1P12107 1806 aaPredicted RBP21.29■■□□□ 1
PDLIM7-209ENST00000503346 CENPFP49454 3210 aa21.28■■□□□ 1
PDLIM7-209ENST00000503346 PALM3A6NDB9 673 aaPredicted RBP21.28■■□□□ 1
PDLIM7-209ENST00000503346 IGHA2P01877 340 aa21.28■■□□□ 1
PDLIM7-209ENST00000503346 HMGB1P09429 215 aaKnown RBP21.28■■□□□ 1
PDLIM7-209ENST00000503346 SLC4A3P48751 1232 aa21.28■■□□□ 1
PDLIM7-209ENST00000503346 SOX10P56693 466 aa21.28■■□□□ 1
PDLIM7-209ENST00000503346 EXOSC10Q01780 885 aaKnown RBP21.28■■□□□ 1
PDLIM7-209ENST00000503346 GRM4Q14833 912 aa21.28■■□□□ 1
PDLIM7-209ENST00000503346 DHX32Q7L7V1 743 aaKnown RBP21.28■■□□□ 1
PDLIM7-209ENST00000503346 TMEM106CQ9BVX2 250 aa21.28■■□□□ 1
PDLIM7-209ENST00000503346 MAD2L2Q9UI95 211 aa21.28■■□□□ 1
PDLIM7-209ENST00000503346 MYCP01106 439 aaPredicted RBP21.27■■□□□ 1
PDLIM7-209ENST00000503346 CCL5P13501 91 aa21.27■■□□□ 1
PDLIM7-209ENST00000503346 MAP3K21Q5TCX8 1036 aa21.27■■□□□ 1
PDLIM7-209ENST00000503346 OLFML2BQ68BL8 750 aa21.27■■□□□ 1
PDLIM7-209ENST00000503346 STAG2Q8N3U4 1231 aa21.27■■□□□ 1
PDLIM7-209ENST00000503346 MAP3K14Q99558 947 aa21.27■■□□□ 1
PDLIM7-209ENST00000503346 CPVLQ9H3G5 476 aa21.27■■□□□ 1
PDLIM7-209ENST00000503346 ACAD9Q9H845 621 aa21.27■■□□□ 1
PDLIM7-209ENST00000503346 RNF146Q9NTX7 359 aa21.27■■□□□ 1
PDLIM7-209ENST00000503346 FLRT1Q9NZU1 646 aa21.27■■□□□ 1
PDLIM7-209ENST00000503346 CCPG1Q9ULG6 757 aa21.27■■□□□ 1
PDLIM7-209ENST00000503346 DDAH1O94760 285 aa21.26■□□□□ 0.99
PDLIM7-209ENST00000503346 TRIM32Q13049 653 aa21.26■□□□□ 0.99
PDLIM7-209ENST00000503346 SGMS1Q86VZ5 419 aa21.26■□□□□ 0.99
PDLIM7-209ENST00000503346 ADGRF4Q8IZF3 695 aa21.26■□□□□ 0.99
PDLIM7-209ENST00000503346 ZNF654Q8IZM8 581 aa21.26■□□□□ 0.99
PDLIM7-209ENST00000503346 TRERF1Q96PN7 1200 aa21.26■□□□□ 0.99
PDLIM7-209ENST00000503346 LRRC2Q9BYS8 371 aa21.26■□□□□ 0.99
PDLIM7-209ENST00000503346 UNC93B1Q9H1C4 597 aa21.26■□□□□ 0.99
PDLIM7-209ENST00000503346 HOMER2Q9NSB8 354 aa21.26■□□□□ 0.99
PDLIM7-209ENST00000503346 DIS3Q9Y2L1 958 aaKnown RBP21.26■□□□□ 0.99
PDLIM7-209ENST00000503346 DNAJC25-GNG10A0A024R161 153 aa21.25■□□□□ 0.99
PDLIM7-209ENST00000503346 POTEFA5A3E0 1075 aa21.25■□□□□ 0.99
PDLIM7-209ENST00000503346 CCDC69A6NI79 296 aa21.25■□□□□ 0.99
PDLIM7-209ENST00000503346 KLRF2D3W0D1 207 aa21.25■□□□□ 0.99
PDLIM7-209ENST00000503346 ALAS1P13196 640 aa21.25■□□□□ 0.99
PDLIM7-209ENST00000503346 RGS19P49795 217 aa21.25■□□□□ 0.99
PDLIM7-209ENST00000503346 ZNF792Q3KQV3 632 aa21.25■□□□□ 0.99
PDLIM7-209ENST00000503346 MFSD14CQ5VZR4 134 aa21.25■□□□□ 0.99
PDLIM7-209ENST00000503346 MAML3Q96JK9 1138 aa21.25■□□□□ 0.99
PDLIM7-209ENST00000503346 RNF208Q9H0X6 261 aa21.25■□□□□ 0.99
PDLIM7-209ENST00000503346 EIF5BO60841 1220 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-209ENST00000503346 PGK2P07205 417 aa21.24■□□□□ 0.99
PDLIM7-209ENST00000503346 GJB1P08034 283 aa21.24■□□□□ 0.99
PDLIM7-209ENST00000503346 PRKAR2AP13861 404 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-209ENST00000503346 CDC37Q16543 378 aaPredicted RBP21.24■□□□□ 0.99
PDLIM7-209ENST00000503346 NFXL1Q6ZNB6 911 aa21.24■□□□□ 0.99
PDLIM7-209ENST00000503346 ANKRD35Q8N283 1001 aa21.24■□□□□ 0.99
PDLIM7-209ENST00000503346 DDX11Q96FC9 970 aa21.24■□□□□ 0.99
PDLIM7-209ENST00000503346 JAKMIP1Q96N16 626 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-209ENST00000503346 JMJD4Q9H9V9 463 aa21.24■□□□□ 0.99
PDLIM7-209ENST00000503346 PAK6Q9NQU5 681 aaPredicted RBP21.24■□□□□ 0.99
PDLIM7-209ENST00000503346 RPTORQ8N122 1335 aa21.24■□□□□ 0.99
PDLIM7-209ENST00000503346 CACNB2Q08289 660 aaPredicted RBP21.23■□□□□ 0.99
PDLIM7-209ENST00000503346 NUP133Q8WUM0 1156 aa21.23■□□□□ 0.99
PDLIM7-209ENST00000503346 MTMR8Q96EF0 704 aa21.23■□□□□ 0.99
PDLIM7-209ENST00000503346 HMX1Q9NP08 348 aaPredicted RBP21.23■□□□□ 0.99
PDLIM7-209ENST00000503346 A1CFQ9NQ94 594 aaKnown RBP21.23■□□□□ 0.99
PDLIM7-209ENST00000503346 SLC12A7Q9Y666 1083 aa21.23■□□□□ 0.99
PDLIM7-209ENST00000503346 CALM1P0DP23 149 aa21.22■□□□□ 0.99
PDLIM7-209ENST00000503346 CALM2P0DP24 149 aa21.22■□□□□ 0.99
PDLIM7-209ENST00000503346 CALM3P0DP25 149 aa21.22■□□□□ 0.99
PDLIM7-209ENST00000503346 TAL1P17542 331 aaPredicted RBP21.22■□□□□ 0.99
PDLIM7-209ENST00000503346 PSMA5P28066 241 aa21.22■□□□□ 0.99
PDLIM7-209ENST00000503346 KIF5BP33176 963 aa21.22■□□□□ 0.99
PDLIM7-209ENST00000503346 SLC35G1Q2M3R5 365 aa21.22■□□□□ 0.99
PDLIM7-209ENST00000503346 MUM1L1Q5H9M0 696 aa21.22■□□□□ 0.99
PDLIM7-209ENST00000503346 BLOC1S2Q6QNY1 142 aa21.22■□□□□ 0.99
PDLIM7-209ENST00000503346 CTCFLQ8NI51 663 aaPredicted RBP21.22■□□□□ 0.99
PDLIM7-209ENST00000503346 TCEANC2Q96MN5 208 aa21.22■□□□□ 0.99
PDLIM7-209ENST00000503346 MYL10Q9BUA6 226 aa21.22■□□□□ 0.99
PDLIM7-209ENST00000503346 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.22■□□□□ 0.998e-9■■■■□ 19.6
PDLIM7-209ENST00000503346 RIOX1Q9H6W3 641 aa21.22■□□□□ 0.99
PDLIM7-209ENST00000503346 DHX16O60231 1041 aaKnown RBP21.21■□□□□ 0.99
PDLIM7-209ENST00000503346 CYP2C19P33261 490 aa21.21■□□□□ 0.99
PDLIM7-209ENST00000503346 GJA8P48165 433 aa21.21■□□□□ 0.99
PDLIM7-209ENST00000503346 QRICH1Q2TAL8 776 aa21.21■□□□□ 0.99
PDLIM7-209ENST00000503346 ZNF467Q7Z7K2 595 aaPredicted RBP21.21■□□□□ 0.99
PDLIM7-209ENST00000503346 FBXL16Q8N461 479 aa21.21■□□□□ 0.99
PDLIM7-209ENST00000503346 MSL3Q8N5Y2 521 aaKnown RBP21.21■□□□□ 0.99
PDLIM7-209ENST00000503346 CLEC4DQ8WXI8 215 aa21.21■□□□□ 0.99
PDLIM7-209ENST00000503346 VAT1LQ9HCJ6 419 aa21.21■□□□□ 0.99
PDLIM7-209ENST00000503346 PFASO15067 1338 aa21.21■□□□□ 0.99
PDLIM7-209ENST00000503346 CYTH3O43739 400 aa21.2■□□□□ 0.98
PDLIM7-209ENST00000503346 CPA1P15085 419 aa21.2■□□□□ 0.98
PDLIM7-209ENST00000503346 EN2P19622 333 aaPredicted RBP21.2■□□□□ 0.98
PDLIM7-209ENST00000503346 RPS6KB1P23443 525 aa21.2■□□□□ 0.98
PDLIM7-209ENST00000503346 FAM133AQ8N9E0 248 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms