RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 MTMR4Q9NYA4 1195 aa12.75□□□□□ -0.37
SNCA-207ENST00000502987 NRBP1Q9UHY1 535 aa12.75□□□□□ -0.37
SNCA-207ENST00000502987 FEM1BQ9UK73 627 aa12.75□□□□□ -0.37
SNCA-207ENST00000502987 RIPK3Q9Y572 518 aa12.75□□□□□ -0.37
SNCA-207ENST00000502987 COL6A3P12111 3177 aa12.75□□□□□ -0.37
SNCA-207ENST00000502987 ROBO3Q96MS0 1386 aa12.74□□□□□ -0.37
SNCA-207ENST00000502987 PGK1P00558 417 aa12.74□□□□□ -0.37
SNCA-207ENST00000502987 BMP3P12645 472 aa12.74□□□□□ -0.37
SNCA-207ENST00000502987 AKR1A1P14550 325 aa12.74□□□□□ -0.37
SNCA-207ENST00000502987 PPARAQ07869 468 aa12.74□□□□□ -0.37
SNCA-207ENST00000502987 TRIM60Q495X7 471 aa12.74□□□□□ -0.37
SNCA-207ENST00000502987 ZMYM1Q5SVZ6 1142 aa12.74□□□□□ -0.37
SNCA-207ENST00000502987 SLFN13Q68D06 897 aa12.74□□□□□ -0.37
SNCA-207ENST00000502987 GPR153Q6NV75 609 aa12.74□□□□□ -0.37
SNCA-207ENST00000502987 REPS2Q8NFH8 660 aa12.74□□□□□ -0.37
SNCA-207ENST00000502987 PI4K2BQ8TCG2 481 aa12.74□□□□□ -0.37
SNCA-207ENST00000502987 MKL1Q969V6 931 aa12.74□□□□□ -0.37
SNCA-207ENST00000502987 MTMR7Q9Y216 660 aa12.74□□□□□ -0.37
SNCA-207ENST00000502987 IGKV6D-41A0A0C4DH26 115 aa12.73□□□□□ -0.37
SNCA-207ENST00000502987 POTEB3A0JP26 581 aa12.73□□□□□ -0.37
SNCA-207ENST00000502987 FAM205CA6NFA0 338 aa12.73□□□□□ -0.37
SNCA-207ENST00000502987 TSPY2A6NKD2 308 aa12.73□□□□□ -0.37
SNCA-207ENST00000502987 TMEM232C9JQI7 657 aa12.73□□□□□ -0.37
SNCA-207ENST00000502987 RRP1P56182 461 aaKnown RBP12.73□□□□□ -0.37
SNCA-207ENST00000502987 CTDSPL2Q05D32 466 aa12.73□□□□□ -0.37
SNCA-207ENST00000502987 POTEBQ6S5H4 581 aa12.73□□□□□ -0.37
SNCA-207ENST00000502987 CCDC129Q6ZRS4 1044 aa12.73□□□□□ -0.37
SNCA-207ENST00000502987 NEDD1Q8NHV4 660 aa12.73□□□□□ -0.37
SNCA-207ENST00000502987 CHURC1Q8WUH1 139 aa12.73□□□□□ -0.37
SNCA-207ENST00000502987 VTI1AQ96AJ9 217 aa12.73□□□□□ -0.37
SNCA-207ENST00000502987 CRBNQ96SW2 442 aa12.73□□□□□ -0.37
SNCA-207ENST00000502987 TOMM22Q9NS69 142 aa12.73□□□□□ -0.37
SNCA-207ENST00000502987 HOMER2Q9NSB8 354 aa12.73□□□□□ -0.37
SNCA-207ENST00000502987 ZHX1Q9UKY1 873 aaPredicted RBP12.73□□□□□ -0.37
SNCA-207ENST00000502987 FAM184BQ9ULE4 1060 aa12.73□□□□□ -0.37
SNCA-207ENST00000502987 RANBP6O60518 1105 aaKnown RBP12.72□□□□□ -0.37
SNCA-207ENST00000502987 ZNF865P0CJ78 1059 aaPredicted RBP12.72□□□□□ -0.37
SNCA-207ENST00000502987 MCCP23508 829 aa12.72□□□□□ -0.37
SNCA-207ENST00000502987 TLE2Q04725 743 aa12.72□□□□□ -0.37
SNCA-207ENST00000502987 PPP4R3BQ5MIZ7 849 aa12.72□□□□□ -0.37
SNCA-207ENST00000502987 GMCL1P1Q8NEA9 526 aa12.72□□□□□ -0.37
SNCA-207ENST00000502987 BADQ92934 168 aa12.72□□□□□ -0.37
SNCA-207ENST00000502987 SLC38A10Q9HBR0 1119 aa12.72□□□□□ -0.37
SNCA-207ENST00000502987 FBXO40Q9UH90 709 aa12.72□□□□□ -0.37
SNCA-207ENST00000502987 STX8Q9UNK0 236 aa12.72□□□□□ -0.37
SNCA-207ENST00000502987 MCM3APO60318 1980 aa12.72□□□□□ -0.37
SNCA-207ENST00000502987 FDX1P10109 184 aa12.71□□□□□ -0.37
SNCA-207ENST00000502987 SLC1A4P43007 532 aa12.71□□□□□ -0.37
SNCA-207ENST00000502987 STAT2P52630 851 aa12.71□□□□□ -0.37
SNCA-207ENST00000502987 MSL3Q8N5Y2 521 aaKnown RBP12.71□□□□□ -0.37
SNCA-207ENST00000502987 EFCAB3Q8N7B9 438 aa12.71□□□□□ -0.37
SNCA-207ENST00000502987 CHST13Q8NET6 341 aa12.71□□□□□ -0.37
SNCA-207ENST00000502987 LENG1Q96BZ8 264 aaPredicted RBP12.71□□□□□ -0.37
SNCA-207ENST00000502987 EVI5LQ96CN4 794 aa12.71□□□□□ -0.37
SNCA-207ENST00000502987 HS3ST6Q96QI5 342 aa12.71□□□□□ -0.37
SNCA-207ENST00000502987 SPC25Q9HBM1 224 aa12.71□□□□□ -0.37
SNCA-207ENST00000502987 INCENPQ9NQS7 918 aa12.71□□□□□ -0.37
SNCA-207ENST00000502987 SYNPO2Q9UMS6 1093 aa12.71□□□□□ -0.37
SNCA-207ENST00000502987 PHF24Q9UPV7 400 aa12.71□□□□□ -0.37
SNCA-207ENST00000502987 TACC3Q9Y6A5 838 aa12.71□□□□□ -0.37
SNCA-207ENST00000502987 A0A0C4DFX4 3053 aa12.71□□□□□ -0.38
SNCA-207ENST00000502987 SYNGAP1Q96PV0 1343 aa12.7□□□□□ -0.38
SNCA-207ENST00000502987 A0A1W2PQ45 241 aaPredicted RBP12.7□□□□□ -0.38
SNCA-207ENST00000502987 A0A1W2PQY0 241 aa12.7□□□□□ -0.38
SNCA-207ENST00000502987 TRIM6-TRIM34B2RNG4 842 aa12.7□□□□□ -0.38
SNCA-207ENST00000502987 ATP2A1O14983 1001 aa12.7□□□□□ -0.38
SNCA-207ENST00000502987 PQBP1O60828 265 aaKnown RBP12.7□□□□□ -0.38
SNCA-207ENST00000502987 SNAI1O95863 264 aaPredicted RBP12.7□□□□□ -0.38
SNCA-207ENST00000502987 ALAS1P13196 640 aa12.7□□□□□ -0.38
SNCA-207ENST00000502987 OAZ1P54368 228 aa12.7□□□□□ -0.38
SNCA-207ENST00000502987 ACVR2BQ13705 512 aa12.7□□□□□ -0.38
SNCA-207ENST00000502987 RRP12Q5JTH9 1297 aaKnown RBP12.7□□□□□ -0.38
SNCA-207ENST00000502987 CCDC174Q6PII3 467 aa12.7□□□□□ -0.38
SNCA-207ENST00000502987 KCTD1Q719H9 257 aa12.7□□□□□ -0.38
SNCA-207ENST00000502987 NOL8Q76FK4 1167 aaKnown RBP12.7□□□□□ -0.38
SNCA-207ENST00000502987 SH3RF1Q7Z6J0 888 aa12.7□□□□□ -0.38
SNCA-207ENST00000502987 FAM160B2Q86V87 743 aa12.7□□□□□ -0.38
SNCA-207ENST00000502987 NUP133Q8WUM0 1156 aa12.7□□□□□ -0.38
SNCA-207ENST00000502987 STAG1Q8WVM7 1258 aa12.7□□□□□ -0.38
SNCA-207ENST00000502987 YTHDC1Q96MU7 727 aaKnown RBP12.7□□□□□ -0.38
SNCA-207ENST00000502987 FAM161BQ96MY7 647 aa12.7□□□□□ -0.38
SNCA-207ENST00000502987 PDLIM7Q9NR12 457 aa12.7□□□□□ -0.38
SNCA-207ENST00000502987 TMEM39AQ9NV64 488 aa12.7□□□□□ -0.38
SNCA-207ENST00000502987 MTMR10Q9NXD2 777 aa12.7□□□□□ -0.38
SNCA-207ENST00000502987 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.7□□□□□ -0.38
SNCA-207ENST00000502987 LTBP2Q14767 1821 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 DNAJC25-GNG10A0A024R161 153 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 DCDC2CA8MYV0 355 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 CLTBP09497 229 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 C6orf222P0C671 652 aaPredicted RBP12.69□□□□□ -0.38
SNCA-207ENST00000502987 RAG1P15918 1043 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 ACLYP53396 1101 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 SNAP25P60880 206 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 SHHQ15465 462 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 KCNA10Q16322 511 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 CCDC96Q2M329 555 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 CCDC144BQ3MJ40 725 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 RCSD1Q6JBY9 416 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 MAMDC4Q6UXC1 1216 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 AGBL1Q96MI9 1066 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 210 ms