RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 RXRAP19793 462 aa20.77■□□□□ 0.92
CCHCR1-216ENST00000502557 SLC4A3P48751 1232 aa20.77■□□□□ 0.92
CCHCR1-216ENST00000502557 CTCFLQ8NI51 663 aaPredicted RBP20.77■□□□□ 0.92
CCHCR1-216ENST00000502557 USP6NLQ92738 828 aa20.77■□□□□ 0.92
CCHCR1-216ENST00000502557 BRF1Q92994 677 aa20.77■□□□□ 0.92
CCHCR1-216ENST00000502557 JMJD4Q9H9V9 463 aa20.77■□□□□ 0.92
CCHCR1-216ENST00000502557 IVNS1ABPQ9Y6Y0 642 aa20.77■□□□□ 0.92
CCHCR1-216ENST00000502557 ZSWIM8A7E2V4 1837 aa20.76■□□□□ 0.91
CCHCR1-216ENST00000502557 KLF18A0A0U1RQI7 1052 aa20.76■□□□□ 0.91
CCHCR1-216ENST00000502557 ICAM1P05362 532 aa20.76■□□□□ 0.91
CCHCR1-216ENST00000502557 TAL1P17542 331 aaPredicted RBP20.76■□□□□ 0.91
CCHCR1-216ENST00000502557 KIF5BP33176 963 aa20.76■□□□□ 0.91
CCHCR1-216ENST00000502557 APOBRQ0VD83 1088 aa20.76■□□□□ 0.91
CCHCR1-216ENST00000502557 GRB14Q14449 540 aa20.76■□□□□ 0.91
CCHCR1-216ENST00000502557 SYNE3Q6ZMZ3 975 aa20.76■□□□□ 0.91
CCHCR1-216ENST00000502557 NBPF11Q86T75 865 aa20.76■□□□□ 0.91
CCHCR1-216ENST00000502557 MICU3Q86XE3 530 aa20.76■□□□□ 0.91
CCHCR1-216ENST00000502557 CCDC144CPQ8IYA2 1237 aa20.76■□□□□ 0.91
CCHCR1-216ENST00000502557 TNS4Q8IZW8 715 aa20.76■□□□□ 0.91
CCHCR1-216ENST00000502557 SOCS4Q8WXH5 440 aa20.76■□□□□ 0.91
CCHCR1-216ENST00000502557 NUDT12Q9BQG2 462 aa20.76■□□□□ 0.91
CCHCR1-216ENST00000502557 VAT1LQ9HCJ6 419 aa20.76■□□□□ 0.91
CCHCR1-216ENST00000502557 STRNO43815 780 aa20.75■□□□□ 0.91
CCHCR1-216ENST00000502557 DHX16O60231 1041 aaKnown RBP20.75■□□□□ 0.91
CCHCR1-216ENST00000502557 IRF5Q13568 498 aa20.75■□□□□ 0.91
CCHCR1-216ENST00000502557 TOB2Q14106 344 aaPredicted RBP20.75■□□□□ 0.91
CCHCR1-216ENST00000502557 CDC37Q16543 378 aaPredicted RBP20.75■□□□□ 0.91
CCHCR1-216ENST00000502557 FANCBQ8NB91 859 aa20.75■□□□□ 0.91
CCHCR1-216ENST00000502557 RAET1EQ8TD07 263 aa20.75■□□□□ 0.91
CCHCR1-216ENST00000502557 MTMR8Q96EF0 704 aa20.75■□□□□ 0.91
CCHCR1-216ENST00000502557 PDRG1Q9NUG6 133 aa20.75■□□□□ 0.91
CCHCR1-216ENST00000502557 CCPG1Q9ULG6 757 aa20.75■□□□□ 0.91
CCHCR1-216ENST00000502557 ZBTB43O43298 467 aa20.74■□□□□ 0.91
CCHCR1-216ENST00000502557 CYTH3O43739 400 aa20.74■□□□□ 0.91
CCHCR1-216ENST00000502557 FCER1AP12319 257 aa20.74■□□□□ 0.91
CCHCR1-216ENST00000502557 TKFCQ3LXA3 575 aa20.74■□□□□ 0.91
CCHCR1-216ENST00000502557 ABRAQ8N0Z2 381 aa20.74■□□□□ 0.91
CCHCR1-216ENST00000502557 CHST13Q8NET6 341 aa20.74■□□□□ 0.91
CCHCR1-216ENST00000502557 RIOX1Q9H6W3 641 aa20.74■□□□□ 0.91
CCHCR1-216ENST00000502557 HOMER2Q9NSB8 354 aa20.74■□□□□ 0.91
CCHCR1-216ENST00000502557 HPS5Q9UPZ3 1129 aa20.74■□□□□ 0.91
CCHCR1-216ENST00000502557 PARP14Q460N5 1801 aa20.74■□□□□ 0.91
CCHCR1-216ENST00000502557 PLEKHA8P1O95397 391 aa20.73■□□□□ 0.91
CCHCR1-216ENST00000502557 ALAS1P13196 640 aa20.73■□□□□ 0.91
CCHCR1-216ENST00000502557 CYP2B6P20813 491 aa20.73■□□□□ 0.91
CCHCR1-216ENST00000502557 ADORA2AP29274 412 aa20.73■□□□□ 0.91
CCHCR1-216ENST00000502557 RGS2P41220 211 aa20.73■□□□□ 0.91
CCHCR1-216ENST00000502557 GNAQP50148 359 aa20.73■□□□□ 0.91
CCHCR1-216ENST00000502557 MAP2K5Q13163 448 aa20.73■□□□□ 0.91
CCHCR1-216ENST00000502557 QRICH1Q2TAL8 776 aa20.73■□□□□ 0.91
CCHCR1-216ENST00000502557 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.73■□□□□ 0.91
CCHCR1-216ENST00000502557 MMP19Q99542 508 aa20.73■□□□□ 0.91
CCHCR1-216ENST00000502557 LZTS2Q9BRK4 669 aa20.73■□□□□ 0.91
CCHCR1-216ENST00000502557 C22orf23Q9BZE7 217 aa20.73■□□□□ 0.91
CCHCR1-216ENST00000502557 RNF146Q9NTX7 359 aa20.73■□□□□ 0.91
CCHCR1-216ENST00000502557 FBXO40Q9UH90 709 aa20.73■□□□□ 0.91
CCHCR1-216ENST00000502557 NAP1L2Q9ULW6 460 aaPredicted RBP20.73■□□□□ 0.91
CCHCR1-216ENST00000502557 GOLGA8AA7E2F4 631 aa20.72■□□□□ 0.91
CCHCR1-216ENST00000502557 GOLGA8BA8MQT2 603 aa20.72■□□□□ 0.91
CCHCR1-216ENST00000502557 ADCY3O60266 1144 aa20.72■□□□□ 0.91
CCHCR1-216ENST00000502557 RCAN1P53805 252 aa20.72■□□□□ 0.91
CCHCR1-216ENST00000502557 EVCP57679 992 aa20.72■□□□□ 0.91
CCHCR1-216ENST00000502557 KCTD2Q14681 263 aa20.72■□□□□ 0.91
CCHCR1-216ENST00000502557 MUM1L1Q5H9M0 696 aa20.72■□□□□ 0.91
CCHCR1-216ENST00000502557 SRBD1Q8N5C6 995 aaKnown RBP20.72■□□□□ 0.91
CCHCR1-216ENST00000502557 TRERF1Q96PN7 1200 aa20.72■□□□□ 0.91
CCHCR1-216ENST00000502557 SPZ1Q9BXG8 430 aa20.72■□□□□ 0.91
CCHCR1-216ENST00000502557 ACAD9Q9H845 621 aa20.72■□□□□ 0.91
CCHCR1-216ENST00000502557 PNMA2Q9UL42 364 aa20.72■□□□□ 0.91
CCHCR1-216ENST00000502557 COBLO75128 1261 aa20.71■□□□□ 0.91
CCHCR1-216ENST00000502557 HOXC6P09630 235 aa20.71■□□□□ 0.91
CCHCR1-216ENST00000502557 XRCC5P13010 732 aaKnown RBP20.71■□□□□ 0.91
CCHCR1-216ENST00000502557 SMARCA1P28370 1054 aa20.71■□□□□ 0.91
CCHCR1-216ENST00000502557 GRK4P32298 578 aa20.71■□□□□ 0.91
CCHCR1-216ENST00000502557 RBM25P49756 843 aaKnown RBP20.71■□□□□ 0.91
CCHCR1-216ENST00000502557 RTN1Q16799 776 aa20.71■□□□□ 0.91
CCHCR1-216ENST00000502557 TMTC3Q6ZXV5 915 aa20.71■□□□□ 0.91
CCHCR1-216ENST00000502557 CMTR1Q8N1G2 835 aaKnown RBP20.71■□□□□ 0.91
CCHCR1-216ENST00000502557 PXYLP1Q8TE99 480 aa20.71■□□□□ 0.91
CCHCR1-216ENST00000502557 PIGSQ96S52 555 aa20.71■□□□□ 0.91
CCHCR1-216ENST00000502557 APBA2Q99767 749 aa20.71■□□□□ 0.91
CCHCR1-216ENST00000502557 BACH2Q9BYV9 841 aa20.71■□□□□ 0.91
CCHCR1-216ENST00000502557 ALDH8A1Q9H2A2 487 aaPredicted RBP20.71■□□□□ 0.91
CCHCR1-216ENST00000502557 FAM217BQ9NTX9 383 aaPredicted RBP20.71■□□□□ 0.91
CCHCR1-216ENST00000502557 ZBTB5O15062 677 aa20.7■□□□□ 0.9
CCHCR1-216ENST00000502557 PPP1R11O60927 126 aaPredicted RBP20.7■□□□□ 0.9
CCHCR1-216ENST00000502557 PGK2P07205 417 aa20.7■□□□□ 0.9
CCHCR1-216ENST00000502557 ELNP15502 786 aa20.7■□□□□ 0.9
CCHCR1-216ENST00000502557 CDC27P30260 824 aa20.7■□□□□ 0.9
CCHCR1-216ENST00000502557 SLC9C1Q4G0N8 1177 aa20.7■□□□□ 0.9
CCHCR1-216ENST00000502557 DPP9Q86TI2 863 aa20.7■□□□□ 0.9
CCHCR1-216ENST00000502557 HOMER1Q86YM7 354 aa20.7■□□□□ 0.9
CCHCR1-216ENST00000502557 SLAIN1Q8ND83 568 aa20.7■□□□□ 0.9
CCHCR1-216ENST00000502557 NPLOC4Q8TAT6 608 aa20.7■□□□□ 0.9
CCHCR1-216ENST00000502557 SH3TC2Q8TF17 1288 aa20.7■□□□□ 0.9
CCHCR1-216ENST00000502557 ABHD8Q96I13 439 aa20.7■□□□□ 0.9
CCHCR1-216ENST00000502557 KIF2CQ99661 725 aa20.7■□□□□ 0.9
CCHCR1-216ENST00000502557 LARP6Q9BRS8 491 aaKnown RBP20.7■□□□□ 0.9
CCHCR1-216ENST00000502557 RBM28Q9NW13 759 aaKnown RBP20.7■□□□□ 0.9
CCHCR1-216ENST00000502557 PDIA3P30101 505 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms