RNA–Protein interactions for RNA: ENST00000501704.3

TSC22D1-211, Transcript of TSC22 domain family member 1, humanhuman

TSL 2 BASIC

Gene TSC22D1, Length 4,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-211ENST00000501704 NR1D1P20393 614 aa16.68■□□□□ 0.26
TSC22D1-211ENST00000501704 NFRKBQ6P4R8 1299 aa16.68■□□□□ 0.26
TSC22D1-211ENST00000501704 NKX2-3Q8TAU0 364 aa16.68■□□□□ 0.26
TSC22D1-211ENST00000501704 VEZTQ9HBM0 779 aa16.68■□□□□ 0.26
TSC22D1-211ENST00000501704 LAMA4Q16363 1823 aa16.68■□□□□ 0.26
TSC22D1-211ENST00000501704 CCDC170Q8IYT3 715 aa16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 SPATA20Q8TB22 786 aa16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 RNF26Q9BY78 433 aaPredicted RBP16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 RTL9Q8NET4 1388 aa16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 BUB1O43683 1085 aa16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 ERCC3P19447 782 aa16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 CHRNA2Q15822 529 aa16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 CFAP221Q4G0U5 840 aa16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 KRT28Q7Z3Y7 464 aa16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 SNX12Q9UMY4 172 aa16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 ZBED6P86452 979 aa16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 ESYT3A0FGR9 886 aa16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 NBPF26B4DH59 902 aa16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 SHOX2O60902 331 aaPredicted RBP16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 NBPF10Q6P3W6 841 aaKnown RBP16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 NBPF15Q8N660 670 aa16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 MYH8P13535 1937 aa16.67■□□□□ 0.26
TSC22D1-211ENST00000501704 TNKSO95271 1327 aa16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 CCDC194A0A1B0GVG4 234 aa16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 HEXIM1O94992 359 aaKnown RBP16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 CLNS1AP54105 237 aaKnown RBP16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 ASIC1P78348 528 aa16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 E2F5Q15329 346 aa16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 RPAINQ86UA6 219 aa16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 KLC4Q9NSK0 619 aa16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 SEC24CP53992 1094 aa16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 ZIM3Q96PE6 472 aa16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 EHD2Q9NZN4 543 aa16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 LSP1P33241 339 aa16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 PDE4DQ08499 809 aa16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 TCIRG1Q13488 830 aa16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 NAA25Q14CX7 972 aa16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 DTHD1Q6ZMT9 781 aa16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 CPLX4Q7Z7G2 160 aa16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 AENQ8WTP8 325 aaKnown RBP16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 OSBPL9Q96SU4 736 aa16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 IQSEC3Q9UPP2 1182 aaPredicted RBP16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 WDR17Q8IZU2 1322 aa16.66■□□□□ 0.26
TSC22D1-211ENST00000501704 FRMD3A2A2Y4 597 aa16.65■□□□□ 0.26
TSC22D1-211ENST00000501704 NCK2O43639 380 aa16.65■□□□□ 0.26
TSC22D1-211ENST00000501704 SLC5A1P13866 664 aa16.65■□□□□ 0.26
TSC22D1-211ENST00000501704 NOX5Q96PH1 765 aa16.65■□□□□ 0.26
TSC22D1-211ENST00000501704 TRMT112Q9UI30 125 aaKnown RBP16.65■□□□□ 0.26
TSC22D1-211ENST00000501704 XDHP47989 1333 aa16.65■□□□□ 0.26
TSC22D1-211ENST00000501704 BICDL2A1A5D9 508 aa16.65■□□□□ 0.26
TSC22D1-211ENST00000501704 KLHL7Q8IXQ5 586 aa16.65■□□□□ 0.26
TSC22D1-211ENST00000501704 RNPC3Q96LT9 517 aaKnown RBP16.65■□□□□ 0.26
TSC22D1-211ENST00000501704 FBXO3Q9UK99 471 aa16.65■□□□□ 0.26
TSC22D1-211ENST00000501704 SNCBQ16143 134 aa16.65■□□□□ 0.26
TSC22D1-211ENST00000501704 CNPY4Q8N129 248 aa16.65■□□□□ 0.26
TSC22D1-211ENST00000501704 PCDHA13Q9Y5I0 950 aa16.65■□□□□ 0.26
TSC22D1-211ENST00000501704 TSPOAP1O95153 1857 aa16.64■□□□□ 0.26
TSC22D1-211ENST00000501704 A0A1W2PQC6 194 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 LRRC10BA6NIK2 292 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 CALRP27797 417 aaKnown RBP16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 APBA1Q02410 837 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 RRAGAQ7L523 313 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 MMGT1Q8N4V1 131 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 ZNF473Q8WTR7 871 aaKnown RBP16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 CNOT6LQ96LI5 555 aaKnown RBP16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 MRC1P22897 1456 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 NEBLO76041 1014 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 CYP7A1P22680 504 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 SF3A3Q12874 501 aaKnown RBP eCLIP16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 NAA35Q5VZE5 725 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 NLRP14Q86W24 1093 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 DNAJC7Q99615 494 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 EPN3Q9H201 632 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 DONSONQ9NYP3 566 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 KIF1CO43896 1103 aaKnown RBP16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 PPP1R37O75864 691 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 GNAT2P19087 354 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 KLK7P49862 253 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 SPATA5Q8NB90 893 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 TSEN2Q8NCE0 465 aaKnown RBP16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 CCT8L2Q96SF2 557 aa16.64■□□□□ 0.25
TSC22D1-211ENST00000501704 A0A1B0GUA9 196 aa16.63■□□□□ 0.25
TSC22D1-211ENST00000501704 GCOM1H8Y6P7 765 aaPredicted RBP16.63■□□□□ 0.25
TSC22D1-211ENST00000501704 MYZAPP0CAP1 466 aa16.63■□□□□ 0.25
TSC22D1-211ENST00000501704 IFFO1Q0D2I5 559 aa16.63■□□□□ 0.25
TSC22D1-211ENST00000501704 MSL1Q68DK7 614 aa16.63■□□□□ 0.25
TSC22D1-211ENST00000501704 EP400NLQ6ZTU2 488 aa16.63■□□□□ 0.25
TSC22D1-211ENST00000501704 SH3RF1Q7Z6J0 888 aa16.63■□□□□ 0.25
TSC22D1-211ENST00000501704 RETREG2Q8NC44 543 aa16.63■□□□□ 0.25
TSC22D1-211ENST00000501704 KRT12Q99456 494 aa16.63■□□□□ 0.25
TSC22D1-211ENST00000501704 MYCNP04198 464 aaPredicted RBP16.63■□□□□ 0.25
TSC22D1-211ENST00000501704 EIF4A3P38919 411 aaKnown RBP16.63■□□□□ 0.25
TSC22D1-211ENST00000501704 ARID5AQ03989 594 aa16.63■□□□□ 0.25
TSC22D1-211ENST00000501704 EARS2Q5JPH6 523 aaKnown RBP16.63■□□□□ 0.25
TSC22D1-211ENST00000501704 KCNV1Q6PIU1 500 aa16.63■□□□□ 0.25
TSC22D1-211ENST00000501704 TOM1L2Q6ZVM7 507 aa16.63■□□□□ 0.25
TSC22D1-211ENST00000501704 RCCD1A6NED2 376 aa16.63■□□□□ 0.25
TSC22D1-211ENST00000501704 PLEKHA8P1O95397 391 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms