RNA–Protein interactions for RNA: ENST00000500401.2

SPCS2P3-201, Transcript of signal peptidase complex subunit 2 pseudogene 3, humanhuman

BASIC

Gene SPCS2P3, Length 656 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS2P3-201ENST00000500401 TRDNQ13061 729 aa28.37■■■□□ 2.13
SPCS2P3-201ENST00000500401 CCDC178Q5BJE1 867 aa28.37■■■□□ 2.13
SPCS2P3-201ENST00000500401 SYDE2Q5VT97 1194 aa28.37■■■□□ 2.13
SPCS2P3-201ENST00000500401 MB21D2Q8IYB1 491 aaPredicted RBP28.37■■■□□ 2.13
SPCS2P3-201ENST00000500401 NCOA7Q8NI08 942 aa28.37■■■□□ 2.13
SPCS2P3-201ENST00000500401 KAT14Q9H8E8 782 aa28.37■■■□□ 2.13
SPCS2P3-201ENST00000500401 HMX1Q9NP08 348 aaPredicted RBP28.37■■■□□ 2.13
SPCS2P3-201ENST00000500401 COPB2P35606 906 aa28.36■■■□□ 2.13
SPCS2P3-201ENST00000500401 CREB3L3Q68CJ9 461 aa28.36■■■□□ 2.13
SPCS2P3-201ENST00000500401 TRPV1Q8NER1 839 aa28.36■■■□□ 2.13
SPCS2P3-201ENST00000500401 RANBP17Q9H2T7 1088 aaKnown RBP28.36■■■□□ 2.13
SPCS2P3-201ENST00000500401 HOMER2Q9NSB8 354 aa28.36■■■□□ 2.13
SPCS2P3-201ENST00000500401 FDX1P10109 184 aa28.35■■■□□ 2.13
SPCS2P3-201ENST00000500401 KCTD2Q14681 263 aa28.35■■■□□ 2.13
SPCS2P3-201ENST00000500401 ZNF792Q3KQV3 632 aa28.35■■■□□ 2.13
SPCS2P3-201ENST00000500401 MAML3Q96JK9 1138 aa28.35■■■□□ 2.13
SPCS2P3-201ENST00000500401 IFIT1BQ5T764 474 aaKnown RBP28.34■■■□□ 2.13
SPCS2P3-201ENST00000500401 OLFML2BQ68BL8 750 aa28.34■■■□□ 2.13
SPCS2P3-201ENST00000500401 RALYLQ86SE5 291 aaKnown RBP28.34■■■□□ 2.13
SPCS2P3-201ENST00000500401 UBA5Q9GZZ9 404 aa28.34■■■□□ 2.13
SPCS2P3-201ENST00000500401 CRISPLD2Q9H0B8 497 aa28.34■■■□□ 2.13
SPCS2P3-201ENST00000500401 GPHNQ9NQX3 736 aaPredicted RBP28.34■■■□□ 2.13
SPCS2P3-201ENST00000500401 MUM1L1Q5H9M0 696 aa28.33■■■□□ 2.13
SPCS2P3-201ENST00000500401 MFSD14CQ5VZR4 134 aa28.33■■■□□ 2.13
SPCS2P3-201ENST00000500401 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.33■■■□□ 2.13
SPCS2P3-201ENST00000500401 FRMPD3Q5JV73 1810 aa28.32■■■□□ 2.12
SPCS2P3-201ENST00000500401 DNAJC25-GNG10A0A024R161 153 aa28.32■■■□□ 2.12
SPCS2P3-201ENST00000500401 IFIT3O14879 490 aaKnown RBP28.32■■■□□ 2.12
SPCS2P3-201ENST00000500401 ALAS1P13196 640 aa28.32■■■□□ 2.12
SPCS2P3-201ENST00000500401 PRAMEF19Q5SWL8 479 aa28.32■■■□□ 2.12
SPCS2P3-201ENST00000500401 UBE2Q1Q7Z7E8 422 aa28.32■■■□□ 2.12
SPCS2P3-201ENST00000500401 CHST13Q8NET6 341 aa28.32■■■□□ 2.12
SPCS2P3-201ENST00000500401 FGD4Q96M96 766 aa28.32■■■□□ 2.12
SPCS2P3-201ENST00000500401 RNF146Q9NTX7 359 aa28.32■■■□□ 2.12
SPCS2P3-201ENST00000500401 CASC1Q6TDU7 716 aa28.31■■■□□ 2.12
SPCS2P3-201ENST00000500401 STAG2Q8N3U4 1231 aa28.31■■■□□ 2.12
SPCS2P3-201ENST00000500401 IGDCC4Q8TDY8 1250 aa28.31■■■□□ 2.12
SPCS2P3-201ENST00000500401 TRERF1Q96PN7 1200 aa28.31■■■□□ 2.12
SPCS2P3-201ENST00000500401 TFRCP02786 760 aaKnown RBP28.3■■■□□ 2.12
SPCS2P3-201ENST00000500401 ICAM1P05362 532 aa28.3■■■□□ 2.12
SPCS2P3-201ENST00000500401 CYBAP13498 195 aa28.3■■■□□ 2.12
SPCS2P3-201ENST00000500401 GPATCH4Q5T3I0 446 aaKnown RBP28.3■■■□□ 2.12
SPCS2P3-201ENST00000500401 CCPG1Q9ULG6 757 aa28.3■■■□□ 2.12
SPCS2P3-201ENST00000500401 LCTP09848 1927 aa28.3■■■□□ 2.12
SPCS2P3-201ENST00000500401 LHX8Q68G74 356 aa28.29■■■□□ 2.12
SPCS2P3-201ENST00000500401 RASEFQ8IZ41 740 aa28.29■■■□□ 2.12
SPCS2P3-201ENST00000500401 DDX11Q96FC9 970 aa28.29■■■□□ 2.12
SPCS2P3-201ENST00000500401 ACAD9Q9H845 621 aa28.29■■■□□ 2.12
SPCS2P3-201ENST00000500401 A1CFQ9NQ94 594 aaKnown RBP28.29■■■□□ 2.12
SPCS2P3-201ENST00000500401 SLC5A4Q9NY91 659 aa28.29■■■□□ 2.12
SPCS2P3-201ENST00000500401 MNX1P50219 401 aaPredicted RBP28.28■■■□□ 2.12
SPCS2P3-201ENST00000500401 ANKRD35Q8N283 1001 aa28.28■■■□□ 2.12
SPCS2P3-201ENST00000500401 DIS3LQ8TF46 1054 aaKnown RBP28.28■■■□□ 2.12
SPCS2P3-201ENST00000500401 FBXO40Q9UH90 709 aa28.28■■■□□ 2.12
SPCS2P3-201ENST00000500401 DIS3Q9Y2L1 958 aaKnown RBP28.28■■■□□ 2.12
SPCS2P3-201ENST00000500401 PARP1P09874 1014 aaKnown RBP28.27■■■□□ 2.12
SPCS2P3-201ENST00000500401 CNTN2Q02246 1040 aa28.27■■■□□ 2.12
SPCS2P3-201ENST00000500401 WTAPQ15007 396 aa28.27■■■□□ 2.12
SPCS2P3-201ENST00000500401 SLC35G1Q2M3R5 365 aa28.27■■■□□ 2.12
SPCS2P3-201ENST00000500401 ASPRV1Q53RT3 343 aa28.27■■■□□ 2.12
SPCS2P3-201ENST00000500401 TMEM67Q5HYA8 995 aa28.27■■■□□ 2.12
SPCS2P3-201ENST00000500401 TINF2Q9BSI4 451 aa28.27■■■□□ 2.12
SPCS2P3-201ENST00000500401 MAD2L2Q9UI95 211 aa28.27■■■□□ 2.12
SPCS2P3-201ENST00000500401 MCM3APO60318 1980 aa28.27■■■□□ 2.12
SPCS2P3-201ENST00000500401 PRC1O43663 620 aa28.26■■■□□ 2.11
SPCS2P3-201ENST00000500401 FARP2O94887 1054 aaPredicted RBP28.26■■■□□ 2.11
SPCS2P3-201ENST00000500401 TKFCQ3LXA3 575 aa28.26■■■□□ 2.11
SPCS2P3-201ENST00000500401 ADGRF4Q8IZF3 695 aa28.26■■■□□ 2.11
SPCS2P3-201ENST00000500401 LY9Q9HBG7 655 aa28.26■■■□□ 2.11
SPCS2P3-201ENST00000500401 OGDHLQ9ULD0 1010 aa28.26■■■□□ 2.11
SPCS2P3-201ENST00000500401 NFIBO00712 420 aa28.25■■■□□ 2.11
SPCS2P3-201ENST00000500401 CNGA1P29973 690 aa28.25■■■□□ 2.11
SPCS2P3-201ENST00000500401 ADCK5Q3MIX3 580 aa28.25■■■□□ 2.11
SPCS2P3-201ENST00000500401 ANO1Q5XXA6 986 aa28.25■■■□□ 2.11
SPCS2P3-201ENST00000500401 PURBQ96QR8 312 aaKnown RBP28.25■■■□□ 2.11
SPCS2P3-201ENST00000500401 LRRC2Q9BYS8 371 aa28.25■■■□□ 2.11
SPCS2P3-201ENST00000500401 ASTN1O14525 1302 aa28.24■■■□□ 2.11
SPCS2P3-201ENST00000500401 ERICH2A1L162 156 aa28.24■■■□□ 2.11
SPCS2P3-201ENST00000500401 TROAPQ12815 778 aa28.24■■■□□ 2.11
SPCS2P3-201ENST00000500401 FAM133AQ8N9E0 248 aa28.24■■■□□ 2.11
SPCS2P3-201ENST00000500401 CLEC4DQ8WXI8 215 aa28.24■■■□□ 2.11
SPCS2P3-201ENST00000500401 JMJD4Q9H9V9 463 aa28.24■■■□□ 2.11
SPCS2P3-201ENST00000500401 DDX20Q9UHI6 824 aaKnown RBP28.24■■■□□ 2.11
SPCS2P3-201ENST00000500401 DDX49Q9Y6V7 483 aaKnown RBP28.24■■■□□ 2.11
SPCS2P3-201ENST00000500401 PALM3A6NDB9 673 aaPredicted RBP28.23■■■□□ 2.11
SPCS2P3-201ENST00000500401 SOWAHBA6NEL2 793 aa28.23■■■□□ 2.11
SPCS2P3-201ENST00000500401 SH2B2O14492 632 aaPredicted RBP28.23■■■□□ 2.11
SPCS2P3-201ENST00000500401 SNAI1O95863 264 aaPredicted RBP28.23■■■□□ 2.11
SPCS2P3-201ENST00000500401 GRM4Q14833 912 aa28.23■■■□□ 2.11
SPCS2P3-201ENST00000500401 CDC37Q16543 378 aaPredicted RBP28.23■■■□□ 2.11
SPCS2P3-201ENST00000500401 MYL10Q9BUA6 226 aa28.23■■■□□ 2.11
SPCS2P3-201ENST00000500401 VAT1LQ9HCJ6 419 aa28.23■■■□□ 2.11
SPCS2P3-201ENST00000500401 MYH6P13533 1939 aa28.23■■■□□ 2.11
SPCS2P3-201ENST00000500401 MCM5P33992 734 aa28.22■■■□□ 2.11
SPCS2P3-201ENST00000500401 SART3Q15020 963 aaKnown RBP28.22■■■□□ 2.11
SPCS2P3-201ENST00000500401 NSMFQ6X4W1 530 aa28.22■■■□□ 2.11
SPCS2P3-201ENST00000500401 PAWRQ96IZ0 340 aaKnown RBP28.22■■■□□ 2.11
SPCS2P3-201ENST00000500401 CYP39A1Q9NYL5 469 aa28.22■■■□□ 2.11
SPCS2P3-201ENST00000500401 WDR19Q8NEZ3 1342 aa28.21■■■□□ 2.11
SPCS2P3-201ENST00000500401 KLRF2D3W0D1 207 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms