RNA–Protein interactions for RNA: ENST00000498015.2

NEB-217, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-217ENST00000498015 VPS53Q5VIR6 699 aa8.61□□□□□ -1.03
NEB-217ENST00000498015 TDHQ8IZJ6 230 aa8.61□□□□□ -1.03
NEB-217ENST00000498015 ANKRD35Q8N283 1001 aa8.61□□□□□ -1.03
NEB-217ENST00000498015 LBHD1Q9BQE6 289 aaPredicted RBP8.61□□□□□ -1.03
NEB-217ENST00000498015 USP26Q9BXU7 913 aa8.61□□□□□ -1.03
NEB-217ENST00000498015 XPNPEP3Q9NQH7 507 aa8.61□□□□□ -1.03
NEB-217ENST00000498015 HELLSQ9NRZ9 838 aa8.61□□□□□ -1.03
NEB-217ENST00000498015 PRKAG2Q9UGJ0 569 aa8.61□□□□□ -1.03
NEB-217ENST00000498015 STX8Q9UNK0 236 aa8.61□□□□□ -1.03
NEB-217ENST00000498015 CNPY2Q9Y2B0 182 aa8.61□□□□□ -1.03
NEB-217ENST00000498015 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.61□□□□□ -1.03
NEB-217ENST00000498015 TACC3Q9Y6A5 838 aa8.61□□□□□ -1.03
NEB-217ENST00000498015 PLXNA1Q9UIW2 1896 aa8.61□□□□□ -1.03
NEB-217ENST00000498015 A0A0D9SFI3 127 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 RANBP6O60518 1105 aaKnown RBP8.6□□□□□ -1.03
NEB-217ENST00000498015 NMT2O60551 498 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 SEC24BO95487 1268 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 PGK1P00558 417 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 AKR1A1P14550 325 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 SDSP20132 328 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 SLC1A4P43007 532 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 ALX1Q15699 326 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 LRIT3Q3SXY7 679 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 TRIM60Q495X7 471 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 PPP4R3BQ5MIZ7 849 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 RNF180Q86T96 592 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 FAM160B2Q86V87 743 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 HSCBQ8IWL3 235 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 CHST13Q8NET6 341 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 CHURC1Q8WUH1 139 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 STAG1Q8WVM7 1258 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 LENG1Q96BZ8 264 aaPredicted RBP8.6□□□□□ -1.03
NEB-217ENST00000498015 GMCL1Q96IK5 515 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 FAM227BQ96M60 508 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 IL17RBQ9NRM6 502 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 TOMM22Q9NS69 142 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 HOMER2Q9NSB8 354 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 FBXO40Q9UH90 709 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 ANAPC4Q9UJX5 808 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 ZHX1Q9UKY1 873 aaPredicted RBP8.6□□□□□ -1.03
NEB-217ENST00000498015 MTMR7Q9Y216 660 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 SZT2Q5T011 3432 aa8.6□□□□□ -1.03
NEB-217ENST00000498015 SYNGAP1Q96PV0 1343 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 DNAJC25-GNG10A0A024R161 153 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 TRIM6-TRIM34B2RNG4 842 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 ORC4O43929 436 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 SNAI1O95863 264 aaPredicted RBP8.59□□□□□ -1.03
NEB-217ENST00000498015 FGAP02671 866 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 FDX1P10109 184 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 GSPT1P15170 499 aaKnown RBP8.59□□□□□ -1.03
NEB-217ENST00000498015 STAT2P52630 851 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 OAZ1P54368 228 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 SNAP25P60880 206 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 NMIQ13287 307 aaPredicted RBP8.59□□□□□ -1.03
NEB-217ENST00000498015 MCMDC2Q4G0Z9 681 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 RRP12Q5JTH9 1297 aaKnown RBP8.59□□□□□ -1.03
NEB-217ENST00000498015 RCSD1Q6JBY9 416 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 CCDC174Q6PII3 467 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 MAMDC4Q6UXC1 1216 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 KCTD1Q719H9 257 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 SKAP1Q86WV1 359 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 MSL3Q8N5Y2 521 aaKnown RBP8.59□□□□□ -1.03
NEB-217ENST00000498015 RILPL2Q969X0 211 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 AGBL1Q96MI9 1066 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 PRDM5Q9NQX1 630 aaPredicted RBP8.59□□□□□ -1.03
NEB-217ENST00000498015 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.59□□□□□ -1.03
NEB-217ENST00000498015 FAM184BQ9ULE4 1060 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 PHF24Q9UPV7 400 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 MCM3APO60318 1980 aa8.59□□□□□ -1.03
NEB-217ENST00000498015 POTEB2H3BUK9 544 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 ST18O60284 1047 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 HSPD1P10809 573 aaKnown RBP8.58□□□□□ -1.04
NEB-217ENST00000498015 ALAS1P13196 640 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 MFAP1P55081 439 aaKnown RBP8.58□□□□□ -1.04
NEB-217ENST00000498015 HAND2P61296 217 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 CNTN2Q02246 1040 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 TLE2Q04725 743 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 ACVR2BQ13705 512 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 SNX17Q15036 470 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 CCDC96Q2M329 555 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 TKFCQ3LXA3 575 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 Q7L0L9 218 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.58□□□□□ -1.04
NEB-217ENST00000498015 ARMCX2Q7L311 632 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 RASGRP2Q7LDG7 609 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 SH3RF1Q7Z6J0 888 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 ZNF467Q7Z7K2 595 aaPredicted RBP8.58□□□□□ -1.04
NEB-217ENST00000498015 ZNF589Q86UQ0 364 aaPredicted RBP8.58□□□□□ -1.04
NEB-217ENST00000498015 DEFB123Q8N688 67 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 FGD4Q96M96 766 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 ACAD9Q9H845 621 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 PDLIM7Q9NR12 457 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 RNF146Q9NTX7 359 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 PRR12Q9ULL5 1215 aa8.58□□□□□ -1.04
NEB-217ENST00000498015 LAMA3Q16787 3333 aa8.57□□□□□ -1.04
NEB-217ENST00000498015 CUL9Q8IWT3 2517 aa8.57□□□□□ -1.04
NEB-217ENST00000498015 ZNF536O15090 1300 aa8.57□□□□□ -1.04
NEB-217ENST00000498015 RAD50Q92878 1312 aa8.57□□□□□ -1.04
NEB-217ENST00000498015 A0A1W2PQ45 241 aaPredicted RBP8.57□□□□□ -1.04
NEB-217ENST00000498015 A0A1W2PQY0 241 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms