RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 CYP2C8P10632 490 aa16.36■□□□□ 0.21
VPS26A-209ENST00000497564 SP3Q02447 781 aa16.36■□□□□ 0.21
VPS26A-209ENST00000497564 SPP2Q13103 211 aa16.36■□□□□ 0.21
VPS26A-209ENST00000497564 NFKBIBQ15653 356 aa16.36■□□□□ 0.21
VPS26A-209ENST00000497564 CCDC96Q2M329 555 aa16.36■□□□□ 0.21
VPS26A-209ENST00000497564 FOXD4L5Q5VV16 416 aaPredicted RBP16.36■□□□□ 0.21
VPS26A-209ENST00000497564 BTNL9Q6UXG8 535 aa16.36■□□□□ 0.21
VPS26A-209ENST00000497564 GADL1Q6ZQY3 521 aa16.36■□□□□ 0.21
VPS26A-209ENST00000497564 OTOP1Q7RTM1 612 aa16.36■□□□□ 0.21
VPS26A-209ENST00000497564 ZNF713Q8N859 430 aaPredicted RBP16.36■□□□□ 0.21
VPS26A-209ENST00000497564 FOXD4L4Q8WXT5 416 aaPredicted RBP16.36■□□□□ 0.21
VPS26A-209ENST00000497564 MTMR8Q96EF0 704 aa16.36■□□□□ 0.21
VPS26A-209ENST00000497564 KIAA1683Q9H0B3 1180 aa16.36■□□□□ 0.21
VPS26A-209ENST00000497564 AS3MTQ9HBK9 375 aa16.36■□□□□ 0.21
VPS26A-209ENST00000497564 CPA4Q9UI42 421 aa16.36■□□□□ 0.21
VPS26A-209ENST00000497564 FRMPD2Q68DX3 1309 aaPredicted RBP16.36■□□□□ 0.21
VPS26A-209ENST00000497564 ADGRA2Q96PE1 1338 aa16.36■□□□□ 0.21
VPS26A-209ENST00000497564 SMCHD1A6NHR9 2005 aa16.36■□□□□ 0.21
VPS26A-209ENST00000497564 PLA2G6O60733 806 aa16.35■□□□□ 0.21
VPS26A-209ENST00000497564 ECM2O94769 699 aaPredicted RBP16.35■□□□□ 0.21
VPS26A-209ENST00000497564 MMP1P03956 469 aa16.35■□□□□ 0.21
VPS26A-209ENST00000497564 BMP3P12645 472 aa16.35■□□□□ 0.21
VPS26A-209ENST00000497564 MCM4P33991 863 aa16.35■□□□□ 0.21
VPS26A-209ENST00000497564 GUCY1B3Q02153 619 aa16.35■□□□□ 0.21
VPS26A-209ENST00000497564 TREML2Q5T2D2 321 aa16.35■□□□□ 0.21
VPS26A-209ENST00000497564 KCTD1Q719H9 257 aa16.35■□□□□ 0.21
VPS26A-209ENST00000497564 LPAR1Q92633 364 aa16.35■□□□□ 0.21
VPS26A-209ENST00000497564 RRP36Q96EU6 259 aaKnown RBP16.35■□□□□ 0.21
VPS26A-209ENST00000497564 ARHGAP39Q9C0H5 1083 aa16.35■□□□□ 0.21
VPS26A-209ENST00000497564 ZCCHC17Q9NP64 241 aaKnown RBP16.35■□□□□ 0.21
VPS26A-209ENST00000497564 GPCPD1Q9NPB8 672 aa16.35■□□□□ 0.21
VPS26A-209ENST00000497564 GJB4Q9NTQ9 266 aa16.35■□□□□ 0.21
VPS26A-209ENST00000497564 TRIM17Q9Y577 477 aa16.35■□□□□ 0.21
VPS26A-209ENST00000497564 RBBP6Q7Z6E9 1792 aaKnown RBP16.35■□□□□ 0.21
VPS26A-209ENST00000497564 U2AF2P26368 475 aaKnown RBP eCLIP16.34■□□□□ 0.21
VPS26A-209ENST00000497564 FOSBP53539 338 aa16.34■□□□□ 0.21
VPS26A-209ENST00000497564 HMGCS2P54868 508 aa16.34■□□□□ 0.21
VPS26A-209ENST00000497564 C17orf99Q6UX52 265 aa16.34■□□□□ 0.21
VPS26A-209ENST00000497564 BRAPQ7Z569 592 aa16.34■□□□□ 0.21
VPS26A-209ENST00000497564 FERMT3Q86UX7 667 aa16.34■□□□□ 0.21
VPS26A-209ENST00000497564 ZNF280CQ8ND82 737 aa16.34■□□□□ 0.21
VPS26A-209ENST00000497564 SHISA4Q96DD7 197 aa16.34■□□□□ 0.21
VPS26A-209ENST00000497564 PHF20Q9BVI0 1012 aa16.34■□□□□ 0.21
VPS26A-209ENST00000497564 UBA5Q9GZZ9 404 aa16.34■□□□□ 0.21
VPS26A-209ENST00000497564 CPVLQ9H3G5 476 aa16.34■□□□□ 0.21
VPS26A-209ENST00000497564 JMJD4Q9H9V9 463 aa16.34■□□□□ 0.21
VPS26A-209ENST00000497564 hCG_1642624A0A1W2PR95 340 aa16.33■□□□□ 0.2
VPS26A-209ENST00000497564 DDX11L8A8MPP1 907 aa16.33■□□□□ 0.2
VPS26A-209ENST00000497564 USP17L10C9JJH3 530 aa16.33■□□□□ 0.2
VPS26A-209ENST00000497564 CTGFP29279 349 aa16.33■□□□□ 0.2
VPS26A-209ENST00000497564 USP14P54578 494 aa16.33■□□□□ 0.2
VPS26A-209ENST00000497564 SAFBQ15424 915 aaKnown RBP eCLIP16.33■□□□□ 0.2
VPS26A-209ENST00000497564 KIAA1755Q5JYT7 1200 aa16.33■□□□□ 0.2
VPS26A-209ENST00000497564 ATL3Q6DD88 541 aa16.33■□□□□ 0.2
VPS26A-209ENST00000497564 TTBK2Q6IQ55 1244 aa16.33■□□□□ 0.2
VPS26A-209ENST00000497564 FASTKD5Q7L8L6 764 aaKnown RBP16.33■□□□□ 0.2
VPS26A-209ENST00000497564 ADGRF4Q8IZF3 695 aa16.33■□□□□ 0.2
VPS26A-209ENST00000497564 ERO1AQ96HE7 468 aa16.33■□□□□ 0.2
VPS26A-209ENST00000497564 FOXP1Q9H334 677 aaPredicted RBP16.33■□□□□ 0.2
VPS26A-209ENST00000497564 BARHL2Q9NY43 387 aa16.33■□□□□ 0.2
VPS26A-209ENST00000497564 VPS54Q9P1Q0 977 aa16.33■□□□□ 0.2
VPS26A-209ENST00000497564 SEC63Q9UGP8 760 aaKnown RBP16.33■□□□□ 0.2
VPS26A-209ENST00000497564 MKI67P46013 3256 aaKnown RBP16.32■□□□□ 0.2
VPS26A-209ENST00000497564 PNMA6FA0A0J9YX94 578 aa16.32■□□□□ 0.2
VPS26A-209ENST00000497564 GOLGA6L22H0YM25 854 aa16.32■□□□□ 0.2
VPS26A-209ENST00000497564 WDR46O15213 610 aaKnown RBP16.32■□□□□ 0.2
VPS26A-209ENST00000497564 PTMSP20962 102 aa16.32■□□□□ 0.2
VPS26A-209ENST00000497564 MTMR2Q13614 643 aa16.32■□□□□ 0.2
VPS26A-209ENST00000497564 WWC2Q6AWC2 1192 aa16.32■□□□□ 0.2
VPS26A-209ENST00000497564 MCTP1Q6DN14 999 aa16.32■□□□□ 0.2
VPS26A-209ENST00000497564 GALNT17Q6IS24 598 aa16.32■□□□□ 0.2
VPS26A-209ENST00000497564 CCDC148Q8NFR7 591 aa16.32■□□□□ 0.2
VPS26A-209ENST00000497564 CCDC12Q8WUD4 166 aaPredicted RBP16.32■□□□□ 0.2
VPS26A-209ENST00000497564 C12orf42Q96LP6 360 aa16.32■□□□□ 0.2
VPS26A-209ENST00000497564 PIGSQ96S52 555 aa16.32■□□□□ 0.2
VPS26A-209ENST00000497564 FEZ1Q99689 392 aa16.32■□□□□ 0.2
VPS26A-209ENST00000497564 KIF28PB7ZC32 967 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 C19orf81C9J6K1 198 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 STXBP3O00186 592 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 ZBTB5O15062 677 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 RAD21O60216 631 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 CALML3P27482 149 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 BACE1P56817 501 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 NPY5RQ15761 445 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 SYDE2Q5VT97 1194 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 PPP1R18Q6NYC8 613 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 FBXO46Q6PJ61 603 aaPredicted RBP16.31■□□□□ 0.2
VPS26A-209ENST00000497564 FAM160B2Q86V87 743 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 DIS3L2Q8IYB7 885 aaKnown RBP16.31■□□□□ 0.2
VPS26A-209ENST00000497564 TMEM87AQ8NBN3 555 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 DAGLBQ8NCG7 672 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 CHURC1Q8WUH1 139 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 NUP88Q99567 741 aaPredicted RBP16.31■□□□□ 0.2
VPS26A-209ENST00000497564 EFCC1Q9HA90 598 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 KCNJ14Q9UNX9 436 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 AGTPBP1Q9UPW5 1226 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 MYH7BA7E2Y1 1941 aa16.31■□□□□ 0.2
VPS26A-209ENST00000497564 ESYT2A0FGR8 921 aa16.3■□□□□ 0.2
VPS26A-209ENST00000497564 TMEM232C9JQI7 657 aa16.3■□□□□ 0.2
VPS26A-209ENST00000497564 BCRP11274 1271 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms