RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 GOLGA8HP0CJ92 632 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 CATSPERGQ6ZRH7 1159 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 KRT25Q7Z3Z0 450 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 IFNL1Q8IU54 200 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 TMEM106CQ9BVX2 250 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 SPZ1Q9BXG8 430 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 PLA2G6O60733 806 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 PFKFB2O60825 505 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 TXLNAP40222 546 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 ARHGEF16Q5VV41 709 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 CYB5R4Q7L1T6 521 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 CCDC84Q86UT8 332 aaPredicted RBP9.89□□□□□ -0.83
U2AF1-212ENST00000496462 CDHR1Q96JP9 859 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 PSTPIP2Q9H939 334 aa9.89□□□□□ -0.83
U2AF1-212ENST00000496462 SCG2P13521 617 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 HOXA7P31268 230 aaPredicted RBP9.88□□□□□ -0.83
U2AF1-212ENST00000496462 TMEM266Q2M3C6 531 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 LY9Q9HBG7 655 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 GPHNQ9NQX3 736 aaPredicted RBP9.88□□□□□ -0.83
U2AF1-212ENST00000496462 MAP3K20Q9NYL2 800 aaKnown RBP9.88□□□□□ -0.83
U2AF1-212ENST00000496462 PLIN4Q96Q06 1357 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 ZEB2O60315 1214 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 PDHBP11177 359 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 IFNAR1P17181 557 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 RXRAP19793 462 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 SHCBP1Q8NEM2 672 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 TRERF1Q96PN7 1200 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 SAGE1Q9NXZ1 904 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 BTBD19C9JJ37 291 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 KRT2P35908 639 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 SLC16A2P36021 539 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 FOSBP53539 338 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 FAM110CQ1W6H9 321 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 RNF207Q6ZRF8 634 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 TMTC3Q6ZXV5 915 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 ANKRD13CQ8N6S4 541 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 MYL10Q9BUA6 226 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 RAVER2Q9HCJ3 691 aaKnown RBP9.88□□□□□ -0.83
U2AF1-212ENST00000496462 PRR12Q9ULL5 1215 aa9.88□□□□□ -0.83
U2AF1-212ENST00000496462 PHF20L1A8MW92 1017 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 PRPF3O43395 683 aaKnown RBP9.87□□□□□ -0.83
U2AF1-212ENST00000496462 FCHSD1Q86WN1 690 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 KCNB2Q92953 911 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 SNX21Q969T3 373 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 TRIM47Q96LD4 638 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 MYH13Q9UKX3 1938 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 NMT2O60551 498 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 PTMSP20962 102 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 PDIA3P30101 505 aaKnown RBP9.87□□□□□ -0.83
U2AF1-212ENST00000496462 ADCK5Q3MIX3 580 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 REXO1Q8N1G1 1221 aaKnown RBP9.87□□□□□ -0.83
U2AF1-212ENST00000496462 ARAP2Q8WZ64 1704 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 ATG4CQ96DT6 458 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 GBP4Q96PP9 640 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 CPA4Q9UI42 421 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 DKC1O60832 514 aaKnown RBP eCLIP9.87□□□□□ -0.83
U2AF1-212ENST00000496462 EXOSC10Q01780 885 aaKnown RBP9.87□□□□□ -0.83
U2AF1-212ENST00000496462 SPRYD3Q8NCJ5 442 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 INTS4Q96HW7 963 aaKnown RBP9.87□□□□□ -0.83
U2AF1-212ENST00000496462 NUP88Q99567 741 aaPredicted RBP9.87□□□□□ -0.83
U2AF1-212ENST00000496462 AP5M1Q9H0R1 490 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 INCENPQ9NQS7 918 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 SH3GLB2Q9NR46 395 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 FOXD4L1Q9NU39 408 aa9.87□□□□□ -0.83
U2AF1-212ENST00000496462 MYH2Q9UKX2 1941 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 SMCO2A6NFE2 343 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 HSPA8P11142 646 aaKnown RBP9.86□□□□□ -0.83
U2AF1-212ENST00000496462 CPA1P15085 419 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 IGDCC4Q8TDY8 1250 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 CDK5RAP3Q96JB5 506 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 TMX3Q96JJ7 454 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 PIGSQ96S52 555 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 P2RX7Q99572 595 aaKnown RBP9.86□□□□□ -0.83
U2AF1-212ENST00000496462 STK24Q9Y6E0 443 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 TBC1D8O95759 1140 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 MYCNP04198 464 aaPredicted RBP9.86□□□□□ -0.83
U2AF1-212ENST00000496462 ATP2B1P20020 1258 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 GTF3C6Q969F1 213 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 CCDC47Q96A33 483 aaKnown RBP9.86□□□□□ -0.83
U2AF1-212ENST00000496462 VTI1AQ96AJ9 217 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 SPATC1LQ9H0A9 340 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 TLR2O60603 784 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 ICAM1P05362 532 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 CNGA1P29973 690 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 ERVK-9P63128 1117 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 ERVK-24P63145 666 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 NSUN6Q8TEA1 469 aaKnown RBP9.86□□□□□ -0.83
U2AF1-212ENST00000496462 BRI3BPQ8WY22 251 aa9.86□□□□□ -0.83
U2AF1-212ENST00000496462 CCND2P30279 289 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 PSMC4P43686 418 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 TM4SF4P48230 202 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 AP3B2Q13367 1082 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 NONOQ15233 471 aaKnown RBP eCLIP9.85□□□□□ -0.83
U2AF1-212ENST00000496462 PKN2Q16513 984 aaKnown RBP9.85□□□□□ -0.83
U2AF1-212ENST00000496462 KCNV1Q6PIU1 500 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 ADGRF4Q8IZF3 695 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 NECAB1Q8N987 351 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 ERMNQ8TAM6 284 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 EMILIN3Q9NT22 766 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 SLC15A5A6NIM6 579 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms