RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 RANBP6O60518 1105 aaKnown RBP12.91□□□□□ -0.34
RNF220-217ENST00000496262 ADAMTS4O75173 837 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 CLTBP09497 229 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 MCCP23508 829 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 SLC1A4P43007 532 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 STAT2P52630 851 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 VPS53Q5VIR6 699 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 CCDC174Q6PII3 467 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 KCTD1Q719H9 257 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 STARD7Q9NQZ5 370 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 TOMM22Q9NS69 142 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.91□□□□□ -0.34
RNF220-217ENST00000496262 FBXO40Q9UH90 709 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 FAM184BQ9ULE4 1060 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 MYH4Q9Y623 1939 aa12.91□□□□□ -0.34
RNF220-217ENST00000496262 ZNFX1Q9P2E3 1918 aaKnown RBP12.9□□□□□ -0.34
RNF220-217ENST00000496262 ADCY6O43306 1168 aa12.9□□□□□ -0.34
RNF220-217ENST00000496262 C6orf222P0C671 652 aaPredicted RBP12.9□□□□□ -0.34
RNF220-217ENST00000496262 ITGB8P26012 769 aa12.9□□□□□ -0.34
RNF220-217ENST00000496262 ACLYP53396 1101 aa12.9□□□□□ -0.34
RNF220-217ENST00000496262 IRX5P78411 483 aaPredicted RBP12.9□□□□□ -0.34
RNF220-217ENST00000496262 ACVR2BQ13705 512 aa12.9□□□□□ -0.34
RNF220-217ENST00000496262 C1orf53Q5VUE5 145 aa12.9□□□□□ -0.34
RNF220-217ENST00000496262 ARMCX2Q7L311 632 aa12.9□□□□□ -0.34
RNF220-217ENST00000496262 MSL3Q8N5Y2 521 aaKnown RBP12.9□□□□□ -0.34
RNF220-217ENST00000496262 CHST13Q8NET6 341 aa12.9□□□□□ -0.34
RNF220-217ENST00000496262 VTI1AQ96AJ9 217 aa12.9□□□□□ -0.34
RNF220-217ENST00000496262 AGBL1Q96MI9 1066 aa12.9□□□□□ -0.34
RNF220-217ENST00000496262 ACAD9Q9H845 621 aa12.9□□□□□ -0.34
RNF220-217ENST00000496262 RNF146Q9NTX7 359 aa12.9□□□□□ -0.34
RNF220-217ENST00000496262 STXBP5LQ9Y2K9 1186 aa12.9□□□□□ -0.34
RNF220-217ENST00000496262 SALL3Q9BXA9 1300 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 DLL1O00548 723 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 ALAS1P13196 640 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 RAG1P15918 1043 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 OAZ1P54368 228 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 CNTN2Q02246 1040 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 KCNA10Q16322 511 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 CCDC96Q2M329 555 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 CCDC144BQ3MJ40 725 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 RRP12Q5JTH9 1297 aaKnown RBP12.89□□□□□ -0.35
RNF220-217ENST00000496262 ZNF697Q5TEC3 545 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 MAMDC4Q6UXC1 1216 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 NOL8Q76FK4 1167 aaKnown RBP12.89□□□□□ -0.35
RNF220-217ENST00000496262 ZNF467Q7Z7K2 595 aaPredicted RBP12.89□□□□□ -0.35
RNF220-217ENST00000496262 CCDC144CPQ8IYA2 1237 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 CHURC1Q8WUH1 139 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 EVI5LQ96CN4 794 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 FGD4Q96M96 766 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 GUCD1Q96NT3 240 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 IL17RBQ9NRM6 502 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 TMEM39AQ9NV64 488 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 SYNPO2Q9UMS6 1093 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.89□□□□□ -0.35
RNF220-217ENST00000496262 TACC3Q9Y6A5 838 aa12.89□□□□□ -0.35
RNF220-217ENST00000496262 DDX49Q9Y6V7 483 aaKnown RBP12.89□□□□□ -0.35
RNF220-217ENST00000496262 A0A0D9SFI3 127 aa12.88□□□□□ -0.35
RNF220-217ENST00000496262 POTEB2H3BUK9 544 aa12.88□□□□□ -0.35
RNF220-217ENST00000496262 DUSP11O75319 330 aaKnown RBP12.88□□□□□ -0.35
RNF220-217ENST00000496262 PDE1AP54750 535 aa12.88□□□□□ -0.35
RNF220-217ENST00000496262 FAM160B2Q86V87 743 aa12.88□□□□□ -0.35
RNF220-217ENST00000496262 NUP133Q8WUM0 1156 aa12.88□□□□□ -0.35
RNF220-217ENST00000496262 STAG1Q8WVM7 1258 aa12.88□□□□□ -0.35
RNF220-217ENST00000496262 GMCL1Q96IK5 515 aa12.88□□□□□ -0.35
RNF220-217ENST00000496262 FAM227BQ96M60 508 aa12.88□□□□□ -0.35
RNF220-217ENST00000496262 TRERF1Q96PN7 1200 aa12.88□□□□□ -0.35
RNF220-217ENST00000496262 TSEN34Q9BSV6 310 aaKnown RBP12.88□□□□□ -0.35
RNF220-217ENST00000496262 ABHD16BQ9H3Z7 469 aa12.88□□□□□ -0.35
RNF220-217ENST00000496262 A1CFQ9NQ94 594 aaKnown RBP12.88□□□□□ -0.35
RNF220-217ENST00000496262 RNF216Q9NWF9 866 aaPredicted RBP12.88□□□□□ -0.35
RNF220-217ENST00000496262 ZNF536O15090 1300 aa12.88□□□□□ -0.35
RNF220-217ENST00000496262 A0A0C4DFX4 3053 aa12.87□□□□□ -0.35
RNF220-217ENST00000496262 DCDC2CA8MYV0 355 aa12.87□□□□□ -0.35
RNF220-217ENST00000496262 TRIM6-TRIM34B2RNG4 842 aa12.87□□□□□ -0.35
RNF220-217ENST00000496262 EPHB4P54760 987 aa12.87□□□□□ -0.35
RNF220-217ENST00000496262 PPP4R3BQ5MIZ7 849 aa12.87□□□□□ -0.35
RNF220-217ENST00000496262 NSMFQ6X4W1 530 aa12.87□□□□□ -0.35
RNF220-217ENST00000496262 KLHDC9Q8NEP7 349 aa12.87□□□□□ -0.35
RNF220-217ENST00000496262 RNPC3Q96LT9 517 aaKnown RBP12.87□□□□□ -0.35
RNF220-217ENST00000496262 GLT1D1Q96MS3 346 aa12.87□□□□□ -0.35
RNF220-217ENST00000496262 SPC25Q9HBM1 224 aa12.87□□□□□ -0.35
RNF220-217ENST00000496262 DAXXQ9UER7 740 aaPredicted RBP12.87□□□□□ -0.35
RNF220-217ENST00000496262 PRR12Q9ULL5 1215 aa12.87□□□□□ -0.35
RNF220-217ENST00000496262 SMCHD1A6NHR9 2005 aa12.87□□□□□ -0.35
RNF220-217ENST00000496262 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.86□□□□□ -0.35
RNF220-217ENST00000496262 SOWAHBA6NEL2 793 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 MOXD2PA6NHM9 499 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 KIAA0355O15063 1070 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 ASGR1P07306 291 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 FDX1P10109 184 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 PTGS1P23219 599 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 SLC16A2P36021 539 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 HAND2P61296 217 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 BEX3Q00994 111 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 FPGSQ05932 587 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 FAAP100Q0VG06 881 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 NMIQ13287 307 aaPredicted RBP12.86□□□□□ -0.35
RNF220-217ENST00000496262 MUM1L1Q5H9M0 696 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 GNASQ5JWF2 1037 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 CCSAPQ6IQ19 270 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms