RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 TAP1Q03518 808 aa12.41□□□□□ -0.42
C9orf78-207ENST00000495934 TTC39AQ5SRH9 613 aa12.41□□□□□ -0.42
C9orf78-207ENST00000495934 MAMDC4Q6UXC1 1216 aa12.41□□□□□ -0.42
C9orf78-207ENST00000495934 SLC43A3Q8NBI5 491 aa12.41□□□□□ -0.42
C9orf78-207ENST00000495934 VWCEQ96DN2 955 aa12.41□□□□□ -0.42
C9orf78-207ENST00000495934 SCLYQ96I15 445 aa12.41□□□□□ -0.42
C9orf78-207ENST00000495934 NOP58Q9Y2X3 529 aaKnown RBP12.41□□□□□ -0.42
C9orf78-207ENST00000495934 PCDHB15Q9Y5E8 787 aa12.41□□□□□ -0.42
C9orf78-207ENST00000495934 C5orf42Q9H799 3197 aa12.4□□□□□ -0.42
C9orf78-207ENST00000495934 WDR46O15213 610 aaKnown RBP12.4□□□□□ -0.42
C9orf78-207ENST00000495934 LPXNO60711 386 aa12.4□□□□□ -0.42
C9orf78-207ENST00000495934 COPB2P35606 906 aa12.4□□□□□ -0.42
C9orf78-207ENST00000495934 ACVR2BQ13705 512 aa12.4□□□□□ -0.42
C9orf78-207ENST00000495934 CCDC144BQ3MJ40 725 aa12.4□□□□□ -0.42
C9orf78-207ENST00000495934 CERS3Q8IU89 383 aa12.4□□□□□ -0.42
C9orf78-207ENST00000495934 TRPV6Q9H1D0 765 aa12.4□□□□□ -0.42
C9orf78-207ENST00000495934 VCPKMTQ9H867 229 aa12.4□□□□□ -0.42
C9orf78-207ENST00000495934 PIH1D3Q9NQM4 214 aaKnown RBP12.4□□□□□ -0.42
C9orf78-207ENST00000495934 ADAMTS5Q9UNA0 930 aa12.4□□□□□ -0.42
C9orf78-207ENST00000495934 CTAGE5O15320 804 aa12.39□□□□□ -0.43
C9orf78-207ENST00000495934 DCXO43602 365 aa12.39□□□□□ -0.43
C9orf78-207ENST00000495934 B4GALT4O60513 344 aa12.39□□□□□ -0.43
C9orf78-207ENST00000495934 IGSF3O75054 1194 aa12.39□□□□□ -0.43
C9orf78-207ENST00000495934 POLR3DP05423 398 aaPredicted RBP12.39□□□□□ -0.43
C9orf78-207ENST00000495934 PFKMP08237 780 aa12.39□□□□□ -0.43
C9orf78-207ENST00000495934 BEX3Q00994 111 aa12.39□□□□□ -0.43
C9orf78-207ENST00000495934 GABPAQ06546 454 aa12.39□□□□□ -0.43
C9orf78-207ENST00000495934 ITGA7Q13683 1181 aa12.39□□□□□ -0.43
C9orf78-207ENST00000495934 CXCL17Q6UXB2 119 aa12.39□□□□□ -0.43
C9orf78-207ENST00000495934 TMEM179Q6ZVK1 233 aa12.39□□□□□ -0.43
C9orf78-207ENST00000495934 CLEC10AQ8IUN9 316 aa12.39□□□□□ -0.43
C9orf78-207ENST00000495934 RPAP2Q8IXW5 612 aaPredicted RBP12.39□□□□□ -0.43
C9orf78-207ENST00000495934 EXOC6Q8TAG9 804 aa12.39□□□□□ -0.43
C9orf78-207ENST00000495934 SLC9A7Q96T83 725 aa12.39□□□□□ -0.43
C9orf78-207ENST00000495934 PHOX2BQ99453 314 aa12.39□□□□□ -0.43
C9orf78-207ENST00000495934 SH2D4AQ9H788 454 aa12.39□□□□□ -0.43
C9orf78-207ENST00000495934 UBE2ZQ9H832 354 aaPredicted RBP12.39□□□□□ -0.43
C9orf78-207ENST00000495934 ARHGEF10LQ9HCE6 1279 aa12.39□□□□□ -0.43
C9orf78-207ENST00000495934 FBXO28Q9NVF7 368 aa12.39□□□□□ -0.43
C9orf78-207ENST00000495934 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.39□□□□□ -0.43
C9orf78-207ENST00000495934 ZNF214Q9UL59 606 aaPredicted RBP12.39□□□□□ -0.43
C9orf78-207ENST00000495934 VWA5AO00534 786 aa12.38□□□□□ -0.43
C9orf78-207ENST00000495934 ST18O60284 1047 aa12.38□□□□□ -0.43
C9orf78-207ENST00000495934 IL9P15248 144 aa12.38□□□□□ -0.43
C9orf78-207ENST00000495934 ZAP70P43403 619 aa12.38□□□□□ -0.43
C9orf78-207ENST00000495934 ICA1Q05084 483 aa12.38□□□□□ -0.43
C9orf78-207ENST00000495934 LEXMQ3ZCV2 418 aa12.38□□□□□ -0.43
C9orf78-207ENST00000495934 CCDC158Q5M9N0 1113 aa12.38□□□□□ -0.43
C9orf78-207ENST00000495934 SPRED2Q7Z698 418 aa12.38□□□□□ -0.43
C9orf78-207ENST00000495934 DEFB128Q7Z7B8 93 aa12.38□□□□□ -0.43
C9orf78-207ENST00000495934 GDPD5Q8WTR4 605 aa12.38□□□□□ -0.43
C9orf78-207ENST00000495934 DDX11Q96FC9 970 aa12.38□□□□□ -0.43
C9orf78-207ENST00000495934 AGBL1Q96MI9 1066 aa12.38□□□□□ -0.43
C9orf78-207ENST00000495934 ABHD16BQ9H3Z7 469 aa12.38□□□□□ -0.43
C9orf78-207ENST00000495934 TET1Q8NFU7 2136 aa12.38□□□□□ -0.43
C9orf78-207ENST00000495934 PTPRZ1P23471 2315 aaPredicted RBP12.37□□□□□ -0.43
C9orf78-207ENST00000495934 DNAJC25-GNG10A0A024R161 153 aa12.37□□□□□ -0.43
C9orf78-207ENST00000495934 KIF28PB7ZC32 967 aa12.37□□□□□ -0.43
C9orf78-207ENST00000495934 IDH1O75874 414 aaKnown RBP12.37□□□□□ -0.43
C9orf78-207ENST00000495934 CABYRO75952 493 aa12.37□□□□□ -0.43
C9orf78-207ENST00000495934 ACTN1P12814 892 aa12.37□□□□□ -0.43
C9orf78-207ENST00000495934 KCNA5P22460 613 aa12.37□□□□□ -0.43
C9orf78-207ENST00000495934 NKX3-2P78367 333 aa12.37□□□□□ -0.43
C9orf78-207ENST00000495934 EVX2Q03828 476 aa12.37□□□□□ -0.43
C9orf78-207ENST00000495934 ZNF467Q7Z7K2 595 aaPredicted RBP12.37□□□□□ -0.43
C9orf78-207ENST00000495934 SIAH1Q8IUQ4 282 aa12.37□□□□□ -0.43
C9orf78-207ENST00000495934 MAGEB6Q8N7X4 407 aa12.37□□□□□ -0.43
C9orf78-207ENST00000495934 REPS2Q8NFH8 660 aa12.37□□□□□ -0.43
C9orf78-207ENST00000495934 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.37□□□□□ -0.43
C9orf78-207ENST00000495934 PHOSPHO2Q8TCD6 241 aa12.37□□□□□ -0.43
C9orf78-207ENST00000495934 CHMP4BQ9H444 224 aaKnown RBP12.37□□□□□ -0.43
C9orf78-207ENST00000495934 PPP1R9AQ9ULJ8 1098 aa12.37□□□□□ -0.43
C9orf78-207ENST00000495934 TMX2Q9Y320 296 aa12.37□□□□□ -0.43
C9orf78-207ENST00000495934 PTPRSQ13332 1948 aa12.37□□□□□ -0.43
C9orf78-207ENST00000495934 ZNF536O15090 1300 aa12.37□□□□□ -0.43
C9orf78-207ENST00000495934 GRIN2DO15399 1336 aa12.37□□□□□ -0.43
C9orf78-207ENST00000495934 ZFHX2Q9C0A1 2572 aaPredicted RBP12.36□□□□□ -0.43
C9orf78-207ENST00000495934 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.36□□□□□ -0.43
C9orf78-207ENST00000495934 SURF6O75683 361 aaKnown RBP12.36□□□□□ -0.43
C9orf78-207ENST00000495934 IRX6P78412 446 aaPredicted RBP12.36□□□□□ -0.43
C9orf78-207ENST00000495934 G3BP1Q13283 466 aaKnown RBP eCLIP12.36□□□□□ -0.43
C9orf78-207ENST00000495934 SNRNP48Q6IEG0 339 aaKnown RBP12.36□□□□□ -0.43
C9orf78-207ENST00000495934 PTCRAQ6ISU1 281 aaPredicted RBP12.36□□□□□ -0.43
C9orf78-207ENST00000495934 HFE2Q6ZVN8 426 aa12.36□□□□□ -0.43
C9orf78-207ENST00000495934 NOL8Q76FK4 1167 aaKnown RBP12.36□□□□□ -0.43
C9orf78-207ENST00000495934 ARMCX2Q7L311 632 aa12.36□□□□□ -0.43
C9orf78-207ENST00000495934 HERC6Q8IVU3 1022 aa12.36□□□□□ -0.43
C9orf78-207ENST00000495934 ANKS1AQ92625 1134 aa12.36□□□□□ -0.43
C9orf78-207ENST00000495934 DBNDD2Q9BQY9 259 aa12.36□□□□□ -0.43
C9orf78-207ENST00000495934 SEZ6LQ9BYH1 1024 aa12.36□□□□□ -0.43
C9orf78-207ENST00000495934 LMCD1Q9NZU5 365 aa12.36□□□□□ -0.43
C9orf78-207ENST00000495934 CACNA1HO95180 2353 aa12.36□□□□□ -0.43
C9orf78-207ENST00000495934 ASTN1O14525 1302 aa12.36□□□□□ -0.43
C9orf78-207ENST00000495934 POTEB3A0JP26 581 aa12.35□□□□□ -0.43
C9orf78-207ENST00000495934 PSMC6P62333 389 aa12.35□□□□□ -0.43
C9orf78-207ENST00000495934 FOXK2Q01167 660 aa12.35□□□□□ -0.43
C9orf78-207ENST00000495934 FSCN1Q16658 493 aaKnown RBP12.35□□□□□ -0.43
C9orf78-207ENST00000495934 POTEBQ6S5H4 581 aa12.35□□□□□ -0.43
C9orf78-207ENST00000495934 TLK2Q86UE8 772 aa12.35□□□□□ -0.43
C9orf78-207ENST00000495934 FGD4Q96M96 766 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms