RNA–Protein interactions for RNA: ENST00000495212.1

HDGF-209, Transcript of heparin binding growth factor, humanhuman

TSL 3

Gene HDGF, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-209ENST00000495212 CHURC1Q8WUH1 139 aa23.6■■□□□ 1.37
HDGF-209ENST00000495212 UBE2OQ9C0C9 1292 aaKnown RBP23.6■■□□□ 1.37
HDGF-209ENST00000495212 ZHX1Q9UKY1 873 aaPredicted RBP23.6■■□□□ 1.37
HDGF-209ENST00000495212 PRR12Q9ULL5 1215 aa23.6■■□□□ 1.37
HDGF-209ENST00000495212 DDX49Q9Y6V7 483 aaKnown RBP23.6■■□□□ 1.37
HDGF-209ENST00000495212 SLC16A2P36021 539 aa23.59■■□□□ 1.37
HDGF-209ENST00000495212 OAZ1P54368 228 aa23.59■■□□□ 1.37
HDGF-209ENST00000495212 CCDC96Q2M329 555 aa23.59■■□□□ 1.37
HDGF-209ENST00000495212 TRIM60Q495X7 471 aa23.59■■□□□ 1.37
HDGF-209ENST00000495212 CWC27Q6UX04 472 aaKnown RBP23.59■■□□□ 1.37
HDGF-209ENST00000495212 CHST13Q8NET6 341 aa23.59■■□□□ 1.37
HDGF-209ENST00000495212 TMEM47Q9BQJ4 181 aa23.59■■□□□ 1.37
HDGF-209ENST00000495212 RNF146Q9NTX7 359 aa23.59■■□□□ 1.37
HDGF-209ENST00000495212 NRBP1Q9UHY1 535 aa23.59■■□□□ 1.37
HDGF-209ENST00000495212 CNPY2Q9Y2B0 182 aa23.59■■□□□ 1.37
HDGF-209ENST00000495212 FRMPD2Q68DX3 1309 aaPredicted RBP23.59■■□□□ 1.37
HDGF-209ENST00000495212 ALAS1P13196 640 aa23.58■■□□□ 1.37
HDGF-209ENST00000495212 AKR1A1P14550 325 aa23.58■■□□□ 1.37
HDGF-209ENST00000495212 LAMA3Q16787 3333 aa23.57■■□□□ 1.36
HDGF-209ENST00000495212 ADCY6O43306 1168 aa23.57■■□□□ 1.36
HDGF-209ENST00000495212 PDE4AP27815 886 aa23.57■■□□□ 1.36
HDGF-209ENST00000495212 MUM1L1Q5H9M0 696 aa23.57■■□□□ 1.36
HDGF-209ENST00000495212 MAMDC4Q6UXC1 1216 aa23.57■■□□□ 1.36
HDGF-209ENST00000495212 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.57■■□□□ 1.364e-6■■■■□ 26
HDGF-209ENST00000495212 TRERF1Q96PN7 1200 aa23.57■■□□□ 1.36
HDGF-209ENST00000495212 ACAD9Q9H845 621 aa23.57■■□□□ 1.36
HDGF-209ENST00000495212 GPCPD1Q9NPB8 672 aa23.57■■□□□ 1.36
HDGF-209ENST00000495212 A1CFQ9NQ94 594 aaKnown RBP23.57■■□□□ 1.36
HDGF-209ENST00000495212 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.57■■□□□ 1.36
HDGF-209ENST00000495212 FBXO40Q9UH90 709 aa23.57■■□□□ 1.36
HDGF-209ENST00000495212 NEDD4P46934 1319 aa23.57■■□□□ 1.36
HDGF-209ENST00000495212 SYNGAP1Q96PV0 1343 aa23.57■■□□□ 1.36
HDGF-209ENST00000495212 MYADML2A6NDP7 307 aa23.56■■□□□ 1.36
HDGF-209ENST00000495212 PPP4R3BQ5MIZ7 849 aa23.56■■□□□ 1.36
HDGF-209ENST00000495212 AKNAD1Q5T1N1 836 aa23.56■■□□□ 1.36
HDGF-209ENST00000495212 ZKSCAN3Q9BRR0 538 aa23.56■■□□□ 1.36
HDGF-209ENST00000495212 PRDM5Q9NQX1 630 aaPredicted RBP23.56■■□□□ 1.36
HDGF-209ENST00000495212 ZMYM6O95789 1325 aa23.56■■□□□ 1.36
HDGF-209ENST00000495212 LTBP2Q14767 1821 aa23.55■■□□□ 1.36
HDGF-209ENST00000495212 SOWAHBA6NEL2 793 aa23.55■■□□□ 1.36
HDGF-209ENST00000495212 PLA2G6O60733 806 aa23.55■■□□□ 1.36
HDGF-209ENST00000495212 ADAMTS4O75173 837 aa23.55■■□□□ 1.36
HDGF-209ENST00000495212 ACVR2BQ13705 512 aa23.55■■□□□ 1.36
HDGF-209ENST00000495212 MFSD6Q6ZSS7 791 aa23.55■■□□□ 1.36
HDGF-209ENST00000495212 ARMCX2Q7L311 632 aa23.55■■□□□ 1.36
HDGF-209ENST00000495212 SH3RF1Q7Z6J0 888 aa23.55■■□□□ 1.36
HDGF-209ENST00000495212 TDHQ8IZJ6 230 aa23.55■■□□□ 1.36
HDGF-209ENST00000495212 DCAF4Q8WV16 495 aa23.55■■□□□ 1.36
HDGF-209ENST00000495212 PURBQ96QR8 312 aaKnown RBP23.55■■□□□ 1.36
HDGF-209ENST00000495212 IL25Q9H293 177 aa23.55■■□□□ 1.36
HDGF-209ENST00000495212 DIAPH3Q9NSV4 1193 aa23.55■■□□□ 1.36
HDGF-209ENST00000495212 FAM184BQ9ULE4 1060 aa23.55■■□□□ 1.36
HDGF-209ENST00000495212 PHF24Q9UPV7 400 aa23.55■■□□□ 1.36
HDGF-209ENST00000495212 SYNRGQ9UMZ2 1314 aa23.55■■□□□ 1.36
HDGF-209ENST00000495212 POTEB2H3BUK9 544 aa23.54■■□□□ 1.36
HDGF-209ENST00000495212 FDX1P10109 184 aa23.54■■□□□ 1.36
HDGF-209ENST00000495212 TOP1P11387 765 aaKnown RBP23.54■■□□□ 1.36
HDGF-209ENST00000495212 ZNF467Q7Z7K2 595 aaPredicted RBP23.54■■□□□ 1.36
HDGF-209ENST00000495212 RNF180Q86T96 592 aa23.54■■□□□ 1.36
HDGF-209ENST00000495212 TICAM2Q86XR7 235 aa23.54■■□□□ 1.36
HDGF-209ENST00000495212 CCDC144CPQ8IYA2 1237 aa23.54■■□□□ 1.36
HDGF-209ENST00000495212 MSL3Q8N5Y2 521 aaKnown RBP23.54■■□□□ 1.36
HDGF-209ENST00000495212 FAM133AQ8N9E0 248 aa23.54■■□□□ 1.36
HDGF-209ENST00000495212 TCP11L1Q9NUJ3 509 aa23.54■■□□□ 1.36
HDGF-209ENST00000495212 LCTP09848 1927 aa23.54■■□□□ 1.36
HDGF-209ENST00000495212 ASTN1O14525 1302 aa23.54■■□□□ 1.36
HDGF-209ENST00000495212 PTGS1P23219 599 aa23.53■■□□□ 1.36
HDGF-209ENST00000495212 SNX17Q15036 470 aa23.53■■□□□ 1.36
HDGF-209ENST00000495212 CCPG1Q9ULG6 757 aa23.53■■□□□ 1.36
HDGF-209ENST00000495212 LAMA4Q16363 1823 aa23.52■■□□□ 1.36
HDGF-209ENST00000495212 A0A1W2PQ45 241 aaPredicted RBP23.52■■□□□ 1.36
HDGF-209ENST00000495212 A0A1W2PQY0 241 aa23.52■■□□□ 1.36
HDGF-209ENST00000495212 TRIM43BA6NCK2 446 aa23.52■■□□□ 1.36
HDGF-209ENST00000495212 ZNF213O14771 459 aa23.52■■□□□ 1.36
HDGF-209ENST00000495212 TLE2Q04725 743 aa23.52■■□□□ 1.36
HDGF-209ENST00000495212 CCDC144BQ3MJ40 725 aa23.52■■□□□ 1.36
HDGF-209ENST00000495212 SYDE2Q5VT97 1194 aa23.52■■□□□ 1.36
HDGF-209ENST00000495212 TRIM43Q96BQ3 446 aaPredicted RBP23.52■■□□□ 1.36
HDGF-209ENST00000495212 KATNBL1Q9H079 304 aa23.52■■□□□ 1.36
HDGF-209ENST00000495212 RANBP17Q9H2T7 1088 aaKnown RBP23.52■■□□□ 1.36
HDGF-209ENST00000495212 PDLIM7Q9NR12 457 aa23.52■■□□□ 1.36
HDGF-209ENST00000495212 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.51■■□□□ 1.35
HDGF-209ENST00000495212 PDHBP11177 359 aa23.51■■□□□ 1.35
HDGF-209ENST00000495212 GSPT1P15170 499 aaKnown RBP23.51■■□□□ 1.35
HDGF-209ENST00000495212 MFAP1P55081 439 aaKnown RBP23.51■■□□□ 1.35
HDGF-209ENST00000495212 KCNA10Q16322 511 aa23.51■■□□□ 1.35
HDGF-209ENST00000495212 TKFCQ3LXA3 575 aa23.51■■□□□ 1.35
HDGF-209ENST00000495212 NSMFQ6X4W1 530 aa23.51■■□□□ 1.35
HDGF-209ENST00000495212 KLHDC9Q8NEP7 349 aa23.51■■□□□ 1.35
HDGF-209ENST00000495212 LBHD1Q9BQE6 289 aaPredicted RBP23.51■■□□□ 1.35
HDGF-209ENST00000495212 ABHD16BQ9H3Z7 469 aa23.51■■□□□ 1.35
HDGF-209ENST00000495212 PRKAG2Q9UGJ0 569 aa23.51■■□□□ 1.35
HDGF-209ENST00000495212 CCSAPQ6IQ19 270 aaPredicted RBP23.5■■□□□ 1.35
HDGF-209ENST00000495212 BTNL9Q6UXG8 535 aa23.5■■□□□ 1.35
HDGF-209ENST00000495212 Q7L0L9 218 aa23.5■■□□□ 1.35
HDGF-209ENST00000495212 BADQ92934 168 aa23.5■■□□□ 1.35
HDGF-209ENST00000495212 CPVLQ9H3G5 476 aa23.5■■□□□ 1.35
HDGF-209ENST00000495212 CYP39A1Q9NYL5 469 aa23.5■■□□□ 1.35
HDGF-209ENST00000495212 DUSP11O75319 330 aaKnown RBP23.49■■□□□ 1.35
HDGF-209ENST00000495212 ICAM1P05362 532 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms