RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 NKD2Q969F2 451 aaPredicted RBP11.06□□□□□ -0.64
GARNL3-219ENST00000495172 FTOQ9C0B1 505 aaKnown RBP eCLIP11.06□□□□□ -0.64
GARNL3-219ENST00000495172 NRBP1Q9UHY1 535 aa11.06□□□□□ -0.64
GARNL3-219ENST00000495172 DENND2AQ9ULE3 1009 aa11.06□□□□□ -0.64
GARNL3-219ENST00000495172 DDX49Q9Y6V7 483 aaKnown RBP11.06□□□□□ -0.64
GARNL3-219ENST00000495172 SPEGQ15772 3267 aa11.06□□□□□ -0.64
GARNL3-219ENST00000495172 ZZEF1O43149 2961 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.05□□□□□ -0.64
GARNL3-219ENST00000495172 STXBP3O00186 592 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 MBTPS2O43462 519 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 GALR2O43603 387 aaPredicted RBP11.05□□□□□ -0.64
GARNL3-219ENST00000495172 GTF2F1P35269 517 aaKnown RBP eCLIP11.05□□□□□ -0.64
GARNL3-219ENST00000495172 GJA9P57773 515 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 COG2Q14746 738 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 TMEM132BQ14DG7 1078 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 ACAP1Q15027 740 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 SMAD2Q15796 467 aaKnown RBP11.05□□□□□ -0.64
GARNL3-219ENST00000495172 CCDC144BQ3MJ40 725 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 TMEM63BQ5T3F8 832 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 RPAINQ86UA6 219 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 TGFBRAP1Q8WUH2 860 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 PABPC5Q96DU9 382 aaKnown RBP11.05□□□□□ -0.64
GARNL3-219ENST00000495172 TGS1Q96RS0 853 aaKnown RBP11.05□□□□□ -0.64
GARNL3-219ENST00000495172 ZBED2Q9BTP6 218 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 PCGF6Q9BYE7 350 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 KIAA1683Q9H0B3 1180 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 SIL1Q9H173 461 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 UPF3AQ9H1J1 476 aaKnown RBP11.05□□□□□ -0.64
GARNL3-219ENST00000495172 MROH8Q9H579 483 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 ADAMTS8Q9UP79 889 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 CLSPNQ9HAW4 1339 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 PARP14Q460N5 1801 aa11.05□□□□□ -0.64
GARNL3-219ENST00000495172 FLNBO75369 2602 aaKnown RBP11.05□□□□□ -0.64
GARNL3-219ENST00000495172 GCN1Q92616 2671 aaKnown RBP11.04□□□□□ -0.64
GARNL3-219ENST00000495172 A0A1W2PRG0 241 aa11.04□□□□□ -0.64
GARNL3-219ENST00000495172 ATP2B3Q16720 1220 aa11.04□□□□□ -0.64
GARNL3-219ENST00000495172 SLC4A10Q6U841 1118 aa11.04□□□□□ -0.64
GARNL3-219ENST00000495172 ATG9AQ7Z3C6 839 aa11.04□□□□□ -0.64
GARNL3-219ENST00000495172 ABRAQ8N0Z2 381 aa11.04□□□□□ -0.64
GARNL3-219ENST00000495172 PHOSPHO2Q8TCD6 241 aa11.04□□□□□ -0.64
GARNL3-219ENST00000495172 TRIM34Q9BYJ4 488 aa11.04□□□□□ -0.64
GARNL3-219ENST00000495172 APAF1O14727 1248 aa11.03□□□□□ -0.64
GARNL3-219ENST00000495172 LINC01565O15544 149 aa11.03□□□□□ -0.64
GARNL3-219ENST00000495172 ZIC2O95409 532 aaPredicted RBP11.03□□□□□ -0.64
GARNL3-219ENST00000495172 ACTN1P12814 892 aa11.03□□□□□ -0.64
GARNL3-219ENST00000495172 GUCY1A2P33402 732 aa11.03□□□□□ -0.64
GARNL3-219ENST00000495172 WDR5P61964 334 aaKnown RBP11.03□□□□□ -0.64
GARNL3-219ENST00000495172 PKN1Q16512 942 aa11.03□□□□□ -0.64
GARNL3-219ENST00000495172 CCDC102BQ68D86 513 aa11.03□□□□□ -0.64
GARNL3-219ENST00000495172 TMEM105Q8N8V8 129 aa11.03□□□□□ -0.64
GARNL3-219ENST00000495172 BANK1Q8NDB2 785 aa11.03□□□□□ -0.64
GARNL3-219ENST00000495172 FBXO22Q8NEZ5 403 aa11.03□□□□□ -0.64
GARNL3-219ENST00000495172 NSUN4Q96CB9 384 aaKnown RBP11.03□□□□□ -0.64
GARNL3-219ENST00000495172 MRPL38Q96DV4 380 aaKnown RBP11.03□□□□□ -0.64
GARNL3-219ENST00000495172 GNL3LQ9NVN8 582 aaKnown RBP11.03□□□□□ -0.64
GARNL3-219ENST00000495172 AATFQ9NY61 560 aaKnown RBP eCLIP11.03□□□□□ -0.64
GARNL3-219ENST00000495172 TANC1Q9C0D5 1861 aa11.03□□□□□ -0.64
GARNL3-219ENST00000495172 FLT1P17948 1338 aa11.03□□□□□ -0.64
GARNL3-219ENST00000495172 TRIP12Q14669 1992 aaPredicted RBP11.03□□□□□ -0.64
GARNL3-219ENST00000495172 UNC79Q9P2D8 2635 aa11.03□□□□□ -0.64
GARNL3-219ENST00000495172 EYA2O00167 538 aa11.02□□□□□ -0.65
GARNL3-219ENST00000495172 USP14P54578 494 aa11.02□□□□□ -0.65
GARNL3-219ENST00000495172 ACVR2BQ13705 512 aa11.02□□□□□ -0.65
GARNL3-219ENST00000495172 RABL6Q3YEC7 729 aaPredicted RBP11.02□□□□□ -0.65
GARNL3-219ENST00000495172 ERICH6Q7L0X2 663 aa11.02□□□□□ -0.65
GARNL3-219ENST00000495172 METTL16Q86W50 562 aaKnown RBP11.02□□□□□ -0.65
GARNL3-219ENST00000495172 CLEC10AQ8IUN9 316 aa11.02□□□□□ -0.65
GARNL3-219ENST00000495172 SLF2Q8IX21 1173 aa11.02□□□□□ -0.65
GARNL3-219ENST00000495172 SPICE1Q8N0Z3 855 aa11.02□□□□□ -0.65
GARNL3-219ENST00000495172 IRF2BPLQ9H1B7 796 aa11.02□□□□□ -0.65
GARNL3-219ENST00000495172 ALDH8A1Q9H2A2 487 aaPredicted RBP11.02□□□□□ -0.65
GARNL3-219ENST00000495172 FBXO28Q9NVF7 368 aa11.02□□□□□ -0.65
GARNL3-219ENST00000495172 FAM50BQ9Y247 325 aa11.02□□□□□ -0.65
GARNL3-219ENST00000495172 FOCADQ5VW36 1801 aa11.02□□□□□ -0.65
GARNL3-219ENST00000495172 TBX10O75333 385 aa11.01□□□□□ -0.65
GARNL3-219ENST00000495172 RFX5P48382 616 aaPredicted RBP11.01□□□□□ -0.65
GARNL3-219ENST00000495172 EVX2Q03828 476 aa11.01□□□□□ -0.65
GARNL3-219ENST00000495172 SIGLEC14Q08ET2 396 aa11.01□□□□□ -0.65
GARNL3-219ENST00000495172 COL19A1Q14993 1142 aa11.01□□□□□ -0.65
GARNL3-219ENST00000495172 SEPT2Q15019 361 aa11.01□□□□□ -0.65
GARNL3-219ENST00000495172 ADGRA1Q86SQ6 560 aa11.01□□□□□ -0.65
GARNL3-219ENST00000495172 POP1Q99575 1024 aaKnown RBP11.01□□□□□ -0.65
GARNL3-219ENST00000495172 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.01□□□□□ -0.65
GARNL3-219ENST00000495172 HOXC10Q9NYD6 342 aa11.01□□□□□ -0.65
GARNL3-219ENST00000495172 FLOT1O75955 427 aa11□□□□□ -0.65
GARNL3-219ENST00000495172 PFKMP08237 780 aa11□□□□□ -0.65
GARNL3-219ENST00000495172 IQCF3P0C7M6 154 aa11□□□□□ -0.65
GARNL3-219ENST00000495172 KCNJ6P48051 423 aa11□□□□□ -0.65
GARNL3-219ENST00000495172 PUM1Q14671 1186 aaKnown RBP eCLIP11□□□□□ -0.65
GARNL3-219ENST00000495172 GPNMBQ14956 572 aa11□□□□□ -0.65
GARNL3-219ENST00000495172 NOL8Q76FK4 1167 aaKnown RBP11□□□□□ -0.65
GARNL3-219ENST00000495172 FOXP4Q8IVH2 680 aaPredicted RBP11□□□□□ -0.65
GARNL3-219ENST00000495172 ZGPATQ8N5A5 531 aaKnown RBP11□□□□□ -0.65
GARNL3-219ENST00000495172 SPDYE1Q8NFV5 336 aaPredicted RBP11□□□□□ -0.65
GARNL3-219ENST00000495172 FGD4Q96M96 766 aa11□□□□□ -0.65
GARNL3-219ENST00000495172 IGFLR1Q9H665 355 aa11□□□□□ -0.65
GARNL3-219ENST00000495172 SPC25Q9HBM1 224 aa11□□□□□ -0.65
GARNL3-219ENST00000495172 MAST4O15021 2626 aa11□□□□□ -0.65
GARNL3-219ENST00000495172 MYH1P12882 1939 aa10.99□□□□□ -0.65
GARNL3-219ENST00000495172 PITPNM1O00562 1244 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms