RNA–Protein interactions for RNA: ENST00000494819.5

GTF2B-207, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 893 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-207ENST00000494819 TMEM31Q5JXX7 168 aa12.08□□□□□ -0.48
GTF2B-207ENST00000494819 ARHGAP45Q92619 1136 aa12.08□□□□□ -0.48
GTF2B-207ENST00000494819 VTI1AQ96AJ9 217 aa12.08□□□□□ -0.48
GTF2B-207ENST00000494819 VWCEQ96DN2 955 aa12.08□□□□□ -0.48
GTF2B-207ENST00000494819 FGD4Q96M96 766 aa12.08□□□□□ -0.48
GTF2B-207ENST00000494819 UPF3AQ9H1J1 476 aaKnown RBP12.08□□□□□ -0.48
GTF2B-207ENST00000494819 DCP1AQ9NPI6 582 aaPredicted RBP12.08□□□□□ -0.48
GTF2B-207ENST00000494819 PPP1R9AQ9ULJ8 1098 aa12.08□□□□□ -0.48
GTF2B-207ENST00000494819 BDP1A6H8Y1 2624 aa12.08□□□□□ -0.48
GTF2B-207ENST00000494819 DNAJC25-GNG10A0A024R161 153 aa12.07□□□□□ -0.48
GTF2B-207ENST00000494819 EPOPA6NHQ4 379 aa12.07□□□□□ -0.48
GTF2B-207ENST00000494819 LRRC37A2A6NM11 1700 aa12.07□□□□□ -0.48
GTF2B-207ENST00000494819 TLR3O15455 904 aaKnown RBP12.07□□□□□ -0.48
GTF2B-207ENST00000494819 SURF6O75683 361 aaKnown RBP12.07□□□□□ -0.48
GTF2B-207ENST00000494819 GABBR2O75899 941 aa12.07□□□□□ -0.48
GTF2B-207ENST00000494819 CCL23P55773 120 aa12.07□□□□□ -0.48
GTF2B-207ENST00000494819 GJA9P57773 515 aa12.07□□□□□ -0.48
GTF2B-207ENST00000494819 AAK1Q2M2I8 961 aa12.07□□□□□ -0.48
GTF2B-207ENST00000494819 KRT40Q6A162 431 aa12.07□□□□□ -0.48
GTF2B-207ENST00000494819 MAMDC4Q6UXC1 1216 aa12.07□□□□□ -0.48
GTF2B-207ENST00000494819 LCORLQ8N3X6 602 aa12.07□□□□□ -0.48
GTF2B-207ENST00000494819 MSL3Q8N5Y2 521 aaKnown RBP12.07□□□□□ -0.48
GTF2B-207ENST00000494819 PCSK9Q8NBP7 692 aaKnown RBP12.07□□□□□ -0.48
GTF2B-207ENST00000494819 SSH3Q8TE77 659 aa12.07□□□□□ -0.48
GTF2B-207ENST00000494819 CRNKL1Q9BZJ0 848 aaKnown RBP12.07□□□□□ -0.48
GTF2B-207ENST00000494819 WNT8AQ9H1J5 351 aa12.07□□□□□ -0.48
GTF2B-207ENST00000494819 MTIF3Q9H2K0 278 aaKnown RBP12.07□□□□□ -0.48
GTF2B-207ENST00000494819 HIPK3Q9H422 1215 aa12.07□□□□□ -0.48
GTF2B-207ENST00000494819 SH2D4AQ9H788 454 aa12.07□□□□□ -0.48
GTF2B-207ENST00000494819 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.07□□□□□ -0.48
GTF2B-207ENST00000494819 RIPK3Q9Y572 518 aa12.07□□□□□ -0.48
GTF2B-207ENST00000494819 MTCH2Q9Y6C9 303 aa12.07□□□□□ -0.48
GTF2B-207ENST00000494819 ZNFX1Q9P2E3 1918 aaKnown RBP12.07□□□□□ -0.48
GTF2B-207ENST00000494819 BCAR3O75815 825 aa12.06□□□□□ -0.48
GTF2B-207ENST00000494819 EEF2P13639 858 aaKnown RBP12.06□□□□□ -0.48
GTF2B-207ENST00000494819 PDE6AP16499 860 aa12.06□□□□□ -0.48
GTF2B-207ENST00000494819 COPB2P35606 906 aa12.06□□□□□ -0.48
GTF2B-207ENST00000494819 BEX3Q00994 111 aa12.06□□□□□ -0.48
GTF2B-207ENST00000494819 ACVR2BQ13705 512 aa12.06□□□□□ -0.48
GTF2B-207ENST00000494819 CCDC144BQ3MJ40 725 aa12.06□□□□□ -0.48
GTF2B-207ENST00000494819 GNASQ5JWF2 1037 aa12.06□□□□□ -0.48
GTF2B-207ENST00000494819 FAM83BQ5T0W9 1011 aa12.06□□□□□ -0.48
GTF2B-207ENST00000494819 C1orf115Q9H7X2 142 aa12.06□□□□□ -0.48
GTF2B-207ENST00000494819 SWAP70Q9UH65 585 aa12.06□□□□□ -0.48
GTF2B-207ENST00000494819 ASTN1O14525 1302 aa12.06□□□□□ -0.48
GTF2B-207ENST00000494819 CYP2D7A0A087X1C5 515 aa12.05□□□□□ -0.48
GTF2B-207ENST00000494819 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.05□□□□□ -0.48
GTF2B-207ENST00000494819 TLL1O43897 1013 aa12.05□□□□□ -0.48
GTF2B-207ENST00000494819 ARHGEF15O94989 841 aa12.05□□□□□ -0.48
GTF2B-207ENST00000494819 PTGS1P23219 599 aa12.05□□□□□ -0.48
GTF2B-207ENST00000494819 SNRNP48Q6IEG0 339 aaKnown RBP12.05□□□□□ -0.48
GTF2B-207ENST00000494819 TMED8Q6PL24 325 aaPredicted RBP12.05□□□□□ -0.48
GTF2B-207ENST00000494819 ALYREFQ86V81 257 aaKnown RBP12.05□□□□□ -0.48
GTF2B-207ENST00000494819 SLC43A3Q8NBI5 491 aa12.05□□□□□ -0.48
GTF2B-207ENST00000494819 CLUAP1Q96AJ1 413 aa12.05□□□□□ -0.48
GTF2B-207ENST00000494819 NUP88Q99567 741 aaPredicted RBP12.05□□□□□ -0.48
GTF2B-207ENST00000494819 NOC4LQ9BVI4 516 aaKnown RBP12.05□□□□□ -0.48
GTF2B-207ENST00000494819 KATNBL1Q9H079 304 aa12.05□□□□□ -0.48
GTF2B-207ENST00000494819 CERS4Q9HA82 394 aa12.05□□□□□ -0.48
GTF2B-207ENST00000494819 SPC25Q9HBM1 224 aa12.05□□□□□ -0.48
GTF2B-207ENST00000494819 NOP58Q9Y2X3 529 aaKnown RBP12.05□□□□□ -0.48
GTF2B-207ENST00000494819 PCDHA11Q9Y5I1 949 aa12.05□□□□□ -0.48
GTF2B-207ENST00000494819 GRIN2DO15399 1336 aa12.05□□□□□ -0.48
GTF2B-207ENST00000494819 TCRBV5S4A2TA0A5A2 114 aa12.04□□□□□ -0.48
GTF2B-207ENST00000494819 ZBBXA8MT70 800 aa12.04□□□□□ -0.48
GTF2B-207ENST00000494819 PRKAB2O43741 272 aa12.04□□□□□ -0.48
GTF2B-207ENST00000494819 CA3P07451 260 aa12.04□□□□□ -0.48
GTF2B-207ENST00000494819 NKX3-2P78367 333 aa12.04□□□□□ -0.48
GTF2B-207ENST00000494819 ATP8B2P98198 1209 aa12.04□□□□□ -0.48
GTF2B-207ENST00000494819 CXCL17Q6UXB2 119 aa12.04□□□□□ -0.48
GTF2B-207ENST00000494819 ARMCX2Q7L311 632 aa12.04□□□□□ -0.48
GTF2B-207ENST00000494819 FBXO22Q8NEZ5 403 aa12.04□□□□□ -0.48
GTF2B-207ENST00000494819 DDX11Q96FC9 970 aa12.04□□□□□ -0.48
GTF2B-207ENST00000494819 SCLYQ96I15 445 aa12.04□□□□□ -0.48
GTF2B-207ENST00000494819 TEX13BQ9BXU2 312 aa12.04□□□□□ -0.48
GTF2B-207ENST00000494819 SLC4A7Q9Y6M7 1214 aa12.04□□□□□ -0.48
GTF2B-207ENST00000494819 ZNF532Q9HCE3 1301 aa12.04□□□□□ -0.48
GTF2B-207ENST00000494819 RAD21O60216 631 aa12.03□□□□□ -0.48
GTF2B-207ENST00000494819 B4GALT4O60513 344 aa12.03□□□□□ -0.48
GTF2B-207ENST00000494819 GPR37L1O60883 481 aa12.03□□□□□ -0.48
GTF2B-207ENST00000494819 ATP2A2P16615 1042 aaKnown RBP12.03□□□□□ -0.48
GTF2B-207ENST00000494819 POU3F3P20264 500 aaPredicted RBP12.03□□□□□ -0.48
GTF2B-207ENST00000494819 CDK8P49336 464 aa12.03□□□□□ -0.48
GTF2B-207ENST00000494819 TTLL4Q14679 1199 aa12.03□□□□□ -0.48
GTF2B-207ENST00000494819 SLFNL1Q499Z3 407 aa12.03□□□□□ -0.48
GTF2B-207ENST00000494819 SLC9C2Q5TAH2 1124 aa12.03□□□□□ -0.48
GTF2B-207ENST00000494819 TMEM57Q8N5G2 664 aa12.03□□□□□ -0.48
GTF2B-207ENST00000494819 CCDC17Q96LX7 622 aa12.03□□□□□ -0.48
GTF2B-207ENST00000494819 TRPV6Q9H1D0 765 aa12.03□□□□□ -0.48
GTF2B-207ENST00000494819 ABHD16BQ9H3Z7 469 aa12.03□□□□□ -0.48
GTF2B-207ENST00000494819 ARMT1Q9H993 441 aa12.03□□□□□ -0.48
GTF2B-207ENST00000494819 CD320Q9NPF0 282 aa12.03□□□□□ -0.48
GTF2B-207ENST00000494819 SLC4A3P48751 1232 aa12.02□□□□□ -0.49
GTF2B-207ENST00000494819 ITGA7Q13683 1181 aa12.02□□□□□ -0.49
GTF2B-207ENST00000494819 C16orf86Q6ZW13 317 aa12.02□□□□□ -0.49
GTF2B-207ENST00000494819 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.02□□□□□ -0.49
GTF2B-207ENST00000494819 SPRED2Q7Z698 418 aa12.02□□□□□ -0.49
GTF2B-207ENST00000494819 CCDC144CPQ8IYA2 1237 aa12.02□□□□□ -0.49
GTF2B-207ENST00000494819 AGBL1Q96MI9 1066 aa12.02□□□□□ -0.49
GTF2B-207ENST00000494819 SLF1Q9BQI6 1058 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms