RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 MYL5Q02045 173 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 ORC2Q13416 577 aaPredicted RBP12.11□□□□□ -0.47
CLCN6-208ENST00000494028 MORC3Q14149 939 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 RRP1BQ14684 758 aaKnown RBP12.11□□□□□ -0.47
CLCN6-208ENST00000494028 ISM2Q6H9L7 571 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 KANK3Q6NY19 840 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 PDXDC2PQ6P474 469 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 ADGRF4Q8IZF3 695 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 REXO1Q8N1G1 1221 aaKnown RBP12.11□□□□□ -0.47
CLCN6-208ENST00000494028 TRIML1Q8N9V2 468 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 GMCL1P1Q8NEA9 526 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 SMARCE1Q969G3 411 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 MKL1Q969V6 931 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 HSD3B7Q9H2F3 369 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 VAT1LQ9HCJ6 419 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 TMEM260Q9NX78 707 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 ZNF70Q9UC06 446 aaPredicted RBP12.11□□□□□ -0.47
CLCN6-208ENST00000494028 HDAC9Q9UKV0 1011 aa12.11□□□□□ -0.47
CLCN6-208ENST00000494028 PNMA6FA0A0J9YX94 578 aa12.1□□□□□ -0.47
CLCN6-208ENST00000494028 NFKBIEO00221 500 aa12.1□□□□□ -0.47
CLCN6-208ENST00000494028 LAD1O00515 517 aa12.1□□□□□ -0.47
CLCN6-208ENST00000494028 TPM3P06753 285 aa12.1□□□□□ -0.47
CLCN6-208ENST00000494028 OR52Z1P0C646 297 aa12.1□□□□□ -0.47
CLCN6-208ENST00000494028 SLFN14P0C7P3 912 aa12.1□□□□□ -0.47
CLCN6-208ENST00000494028 ABCB5Q2M3G0 1257 aa12.1□□□□□ -0.47
CLCN6-208ENST00000494028 SLFN13Q68D06 897 aa12.1□□□□□ -0.47
CLCN6-208ENST00000494028 KCTD1Q719H9 257 aa12.1□□□□□ -0.47
CLCN6-208ENST00000494028 NEK8Q86SG6 692 aa12.1□□□□□ -0.47
CLCN6-208ENST00000494028 SIAH1Q8IUQ4 282 aa12.1□□□□□ -0.47
CLCN6-208ENST00000494028 MTMR14Q8NCE2 650 aa12.1□□□□□ -0.47
CLCN6-208ENST00000494028 COA7Q96BR5 231 aa12.1□□□□□ -0.47
CLCN6-208ENST00000494028 ZBED3Q96IU2 234 aaPredicted RBP12.1□□□□□ -0.47
CLCN6-208ENST00000494028 CSRNP1Q96S65 589 aa12.1□□□□□ -0.47
CLCN6-208ENST00000494028 KANSL2Q9H9L4 492 aa12.1□□□□□ -0.47
CLCN6-208ENST00000494028 HERC5Q9UII4 1024 aaKnown RBP12.1□□□□□ -0.47
CLCN6-208ENST00000494028 ZNRF3Q9ULT6 936 aa12.1□□□□□ -0.47
CLCN6-208ENST00000494028 ZBTB12Q9Y330 459 aaPredicted RBP12.1□□□□□ -0.47
CLCN6-208ENST00000494028 PAPPA2Q9BXP8 1791 aa12.1□□□□□ -0.47
CLCN6-208ENST00000494028 SMTNL1A8MU46 457 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 TCP10L2B9ZVM9 353 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 USP17L10C9JJH3 530 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 ZBTB5O15062 677 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 NEMFO60524 1076 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 NDUFB10O96000 172 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 GH2P01242 217 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 SLC16A2P36021 539 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 CLK2P49760 499 aaKnown RBP12.09□□□□□ -0.47
CLCN6-208ENST00000494028 DPYDQ12882 1025 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 DLGAP5Q15398 846 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 CCDC144BQ3MJ40 725 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 JAKMIP3Q5VZ66 844 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 AGBL3Q8NEM8 1001 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 FAM151AQ8WW52 585 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 PAGE5Q96GU1 130 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 GMCL1Q96IK5 515 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 ZNF830Q96NB3 372 aaPredicted RBP12.09□□□□□ -0.47
CLCN6-208ENST00000494028 PYM1Q9BRP8 204 aaKnown RBP12.09□□□□□ -0.47
CLCN6-208ENST00000494028 TAOK3Q9H2K8 898 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 SPON1Q9HCB6 807 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 PIM2Q9P1W9 311 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 PYCARDQ9ULZ3 195 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 SYNPO2Q9UMS6 1093 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 LTBP3Q9NS15 1303 aa12.09□□□□□ -0.47
CLCN6-208ENST00000494028 PP2D1A8MPX8 630 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 EDIL3O43854 480 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 POLD1P28340 1107 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 CASP1P29466 404 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 TXLNAP40222 546 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 TPM4P67936 248 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 FMR1Q06787 632 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLCN6-208ENST00000494028 CDC37Q16543 378 aaPredicted RBP12.08□□□□□ -0.48
CLCN6-208ENST00000494028 UBE2SQ16763 222 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 QRICH1Q2TAL8 776 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 LETM2Q2VYF4 491 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 FKBP1CQ5VVH2 108 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 POTEDQ86YR6 584 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 CDAN1Q8IWY9 1227 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 TBCKQ8TEA7 893 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 CCDC34Q96HJ3 373 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 MTRQ99707 1265 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 RIC8AQ9NPQ8 531 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 DISC1Q9NRI5 854 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 BIN2Q9UBW5 565 aaPredicted RBP12.08□□□□□ -0.48
CLCN6-208ENST00000494028 DACH1Q9UI36 760 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 ZBTB21Q9ULJ3 1066 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 WDR90Q96KV7 1748 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 SYNRGQ9UMZ2 1314 aa12.08□□□□□ -0.48
CLCN6-208ENST00000494028 LOC285556D6RIA3 1793 aa12.07□□□□□ -0.48
CLCN6-208ENST00000494028 PHIPQ8WWQ0 1821 aa12.07□□□□□ -0.48
CLCN6-208ENST00000494028 GTPBP6O43824 516 aaPredicted RBP12.07□□□□□ -0.48
CLCN6-208ENST00000494028 SLC37A4O43826 429 aa12.07□□□□□ -0.48
CLCN6-208ENST00000494028 SMC2O95347 1197 aa12.07□□□□□ -0.48
CLCN6-208ENST00000494028 TDP2O95551 362 aa12.07□□□□□ -0.48
CLCN6-208ENST00000494028 LMOD1P29536 600 aaPredicted RBP12.07□□□□□ -0.48
CLCN6-208ENST00000494028 STAT6P42226 847 aa12.07□□□□□ -0.48
CLCN6-208ENST00000494028 SLC1A4P43007 532 aa12.07□□□□□ -0.48
CLCN6-208ENST00000494028 AFMP43652 599 aa12.07□□□□□ -0.48
CLCN6-208ENST00000494028 CXCL9Q07325 125 aa12.07□□□□□ -0.48
CLCN6-208ENST00000494028 KARSQ15046 597 aaKnown RBP12.07□□□□□ -0.48
CLCN6-208ENST00000494028 NAALADL2Q58DX5 795 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms