RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 COL9A3Q14050 684 aaPredicted RBP11.07□□□□□ -0.64
SGIP1-213ENST00000493564 CCDC178Q5BJE1 867 aa11.07□□□□□ -0.64
SGIP1-213ENST00000493564 IFIT1BQ5T764 474 aaKnown RBP11.07□□□□□ -0.64
SGIP1-213ENST00000493564 SYDE2Q5VT97 1194 aa11.07□□□□□ -0.64
SGIP1-213ENST00000493564 ANO1Q5XXA6 986 aa11.07□□□□□ -0.64
SGIP1-213ENST00000493564 RALYLQ86SE5 291 aaKnown RBP11.07□□□□□ -0.64
SGIP1-213ENST00000493564 NCOA7Q8NI08 942 aa11.07□□□□□ -0.64
SGIP1-213ENST00000493564 ANKS1AQ92625 1134 aa11.07□□□□□ -0.64
SGIP1-213ENST00000493564 TRERF1Q96PN7 1200 aa11.07□□□□□ -0.64
SGIP1-213ENST00000493564 VAT1LQ9HCJ6 419 aa11.07□□□□□ -0.64
SGIP1-213ENST00000493564 A0A0G2JMZ2 1700 aa11.06□□□□□ -0.64
SGIP1-213ENST00000493564 ZNFX1Q9P2E3 1918 aaKnown RBP11.06□□□□□ -0.64
SGIP1-213ENST00000493564 SLC27A2O14975 620 aa11.06□□□□□ -0.64
SGIP1-213ENST00000493564 CDC45O75419 566 aa11.06□□□□□ -0.64
SGIP1-213ENST00000493564 FDX1P10109 184 aa11.06□□□□□ -0.64
SGIP1-213ENST00000493564 COPB2P35606 906 aa11.06□□□□□ -0.64
SGIP1-213ENST00000493564 OAZ1P54368 228 aa11.06□□□□□ -0.64
SGIP1-213ENST00000493564 CNTN2Q02246 1040 aa11.06□□□□□ -0.64
SGIP1-213ENST00000493564 SEC23AQ15436 765 aa11.06□□□□□ -0.64
SGIP1-213ENST00000493564 ZNF792Q3KQV3 632 aa11.06□□□□□ -0.64
SGIP1-213ENST00000493564 MUM1L1Q5H9M0 696 aa11.06□□□□□ -0.64
SGIP1-213ENST00000493564 CREB3L3Q68CJ9 461 aa11.06□□□□□ -0.64
SGIP1-213ENST00000493564 LHX8Q68G74 356 aa11.06□□□□□ -0.64
SGIP1-213ENST00000493564 CASC1Q6TDU7 716 aa11.06□□□□□ -0.64
SGIP1-213ENST00000493564 BTNL9Q6UXG8 535 aa11.06□□□□□ -0.64
SGIP1-213ENST00000493564 CHST13Q8NET6 341 aa11.06□□□□□ -0.64
SGIP1-213ENST00000493564 DIS3LQ8TF46 1054 aaKnown RBP11.06□□□□□ -0.64
SGIP1-213ENST00000493564 GPHNQ9NQX3 736 aaPredicted RBP11.06□□□□□ -0.64
SGIP1-213ENST00000493564 RNF146Q9NTX7 359 aa11.06□□□□□ -0.64
SGIP1-213ENST00000493564 CCPG1Q9ULG6 757 aa11.06□□□□□ -0.64
SGIP1-213ENST00000493564 FARP2O94887 1054 aaPredicted RBP11.05□□□□□ -0.64
SGIP1-213ENST00000493564 IGHA2P01877 340 aa11.05□□□□□ -0.64
SGIP1-213ENST00000493564 MYCNP04198 464 aaPredicted RBP11.05□□□□□ -0.64
SGIP1-213ENST00000493564 PARP1P09874 1014 aaKnown RBP11.05□□□□□ -0.64
SGIP1-213ENST00000493564 SNHG28P0DPA3 235 aa11.05□□□□□ -0.64
SGIP1-213ENST00000493564 ANTXR2P58335 489 aa11.05□□□□□ -0.64
SGIP1-213ENST00000493564 NECTIN1Q15223 517 aa11.05□□□□□ -0.64
SGIP1-213ENST00000493564 TMEM67Q5HYA8 995 aa11.05□□□□□ -0.64
SGIP1-213ENST00000493564 OLFML2BQ68BL8 750 aa11.05□□□□□ -0.64
SGIP1-213ENST00000493564 STAG2Q8N3U4 1231 aa11.05□□□□□ -0.64
SGIP1-213ENST00000493564 DPF3Q92784 378 aa11.05□□□□□ -0.64
SGIP1-213ENST00000493564 PAWRQ96IZ0 340 aaKnown RBP11.05□□□□□ -0.64
SGIP1-213ENST00000493564 PURBQ96QR8 312 aaKnown RBP11.05□□□□□ -0.64
SGIP1-213ENST00000493564 CRISPLD2Q9H0B8 497 aa11.05□□□□□ -0.64
SGIP1-213ENST00000493564 RANBP17Q9H2T7 1088 aaKnown RBP11.05□□□□□ -0.64
SGIP1-213ENST00000493564 ACAD9Q9H845 621 aa11.05□□□□□ -0.64
SGIP1-213ENST00000493564 DDX49Q9Y6V7 483 aaKnown RBP11.05□□□□□ -0.64
SGIP1-213ENST00000493564 LAMA4Q16363 1823 aa11.05□□□□□ -0.64
SGIP1-213ENST00000493564 ERICH2A1L162 156 aa11.04□□□□□ -0.64
SGIP1-213ENST00000493564 DHX16O60231 1041 aaKnown RBP11.04□□□□□ -0.64
SGIP1-213ENST00000493564 ICAM1P05362 532 aa11.04□□□□□ -0.64
SGIP1-213ENST00000493564 CYBAP13498 195 aa11.04□□□□□ -0.64
SGIP1-213ENST00000493564 NT5C2P49902 561 aa11.04□□□□□ -0.64
SGIP1-213ENST00000493564 WTAPQ15007 396 aa11.04□□□□□ -0.64
SGIP1-213ENST00000493564 GPATCH4Q5T3I0 446 aaKnown RBP11.04□□□□□ -0.64
SGIP1-213ENST00000493564 NSMFQ6X4W1 530 aa11.04□□□□□ -0.64
SGIP1-213ENST00000493564 MB21D2Q8IYB1 491 aaPredicted RBP11.04□□□□□ -0.64
SGIP1-213ENST00000493564 ADGRF4Q8IZF3 695 aa11.04□□□□□ -0.64
SGIP1-213ENST00000493564 IGDCC4Q8TDY8 1250 aa11.04□□□□□ -0.64
SGIP1-213ENST00000493564 TINF2Q9BSI4 451 aa11.04□□□□□ -0.64
SGIP1-213ENST00000493564 LRRC2Q9BYS8 371 aa11.04□□□□□ -0.64
SGIP1-213ENST00000493564 FBXO40Q9UH90 709 aa11.04□□□□□ -0.64
SGIP1-213ENST00000493564 OGDHLQ9ULD0 1010 aa11.04□□□□□ -0.64
SGIP1-213ENST00000493564 PDE4DIPQ5VU43 2346 aa11.04□□□□□ -0.64
SGIP1-213ENST00000493564 SMCHD1A6NHR9 2005 aa11.04□□□□□ -0.64
SGIP1-213ENST00000493564 DNAJC25-GNG10A0A024R161 153 aa11.03□□□□□ -0.64
SGIP1-213ENST00000493564 POTEB2H3BUK9 544 aa11.03□□□□□ -0.64
SGIP1-213ENST00000493564 NFIBO00712 420 aa11.03□□□□□ -0.64
SGIP1-213ENST00000493564 PRC1O43663 620 aa11.03□□□□□ -0.64
SGIP1-213ENST00000493564 MNX1P50219 401 aaPredicted RBP11.03□□□□□ -0.64
SGIP1-213ENST00000493564 BAATQ14032 418 aaPredicted RBP11.03□□□□□ -0.64
SGIP1-213ENST00000493564 TKFCQ3LXA3 575 aa11.03□□□□□ -0.64
SGIP1-213ENST00000493564 USH1GQ495M9 461 aa11.03□□□□□ -0.64
SGIP1-213ENST00000493564 ERICH6BQ5W0A0 696 aa11.03□□□□□ -0.64
SGIP1-213ENST00000493564 UBE2Q1Q7Z7E8 422 aa11.03□□□□□ -0.64
SGIP1-213ENST00000493564 RASEFQ8IZ41 740 aa11.03□□□□□ -0.64
SGIP1-213ENST00000493564 A1CFQ9NQ94 594 aaKnown RBP11.03□□□□□ -0.64
SGIP1-213ENST00000493564 DDX20Q9UHI6 824 aaKnown RBP11.03□□□□□ -0.64
SGIP1-213ENST00000493564 MAD2L2Q9UI95 211 aa11.03□□□□□ -0.64
SGIP1-213ENST00000493564 DIS3Q9Y2L1 958 aaKnown RBP11.03□□□□□ -0.64
SGIP1-213ENST00000493564 RBBP6Q7Z6E9 1792 aaKnown RBP11.03□□□□□ -0.64
SGIP1-213ENST00000493564 SOWAHBA6NEL2 793 aa11.02□□□□□ -0.65
SGIP1-213ENST00000493564 KLRF2D3W0D1 207 aa11.02□□□□□ -0.65
SGIP1-213ENST00000493564 SNAI1O95863 264 aaPredicted RBP11.02□□□□□ -0.65
SGIP1-213ENST00000493564 MCM5P33992 734 aa11.02□□□□□ -0.65
SGIP1-213ENST00000493564 SART3Q15020 963 aaKnown RBP11.02□□□□□ -0.65
SGIP1-213ENST00000493564 ASPRV1Q53RT3 343 aa11.02□□□□□ -0.65
SGIP1-213ENST00000493564 GJC2Q5T442 439 aaPredicted RBP11.02□□□□□ -0.65
SGIP1-213ENST00000493564 NFXL1Q6ZNB6 911 aa11.02□□□□□ -0.65
SGIP1-213ENST00000493564 NECAB2Q7Z6G3 386 aa11.02□□□□□ -0.65
SGIP1-213ENST00000493564 RAB11FIP4Q86YS3 637 aa11.02□□□□□ -0.65
SGIP1-213ENST00000493564 CCDC144CPQ8IYA2 1237 aa11.02□□□□□ -0.65
SGIP1-213ENST00000493564 NUP133Q8WUM0 1156 aa11.02□□□□□ -0.65
SGIP1-213ENST00000493564 PIBF1Q8WXW3 757 aa11.02□□□□□ -0.65
SGIP1-213ENST00000493564 TBC1D5Q92609 795 aa11.02□□□□□ -0.65
SGIP1-213ENST00000493564 FGD4Q96M96 766 aa11.02□□□□□ -0.65
SGIP1-213ENST00000493564 MYL10Q9BUA6 226 aa11.02□□□□□ -0.65
SGIP1-213ENST00000493564 JMJD4Q9H9V9 463 aa11.02□□□□□ -0.65
SGIP1-213ENST00000493564 LY9Q9HBG7 655 aa11.02□□□□□ -0.65
SGIP1-213ENST00000493564 ZHX1Q9UKY1 873 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms