RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 TTBK2Q6IQ55 1244 aa12.47□□□□□ -0.41
CDC42SE1-206ENST00000492796 NPLOC4Q8TAT6 608 aa12.47□□□□□ -0.41
CDC42SE1-206ENST00000492796 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.47□□□□□ -0.41
CDC42SE1-206ENST00000492796 ACAD9Q9H845 621 aa12.47□□□□□ -0.41
CDC42SE1-206ENST00000492796 GPCPD1Q9NPB8 672 aa12.47□□□□□ -0.41
CDC42SE1-206ENST00000492796 DIS3Q9Y2L1 958 aaKnown RBP12.47□□□□□ -0.41
CDC42SE1-206ENST00000492796 RIPK3Q9Y572 518 aa12.47□□□□□ -0.41
CDC42SE1-206ENST00000492796 FRMPD3Q5JV73 1810 aa12.46□□□□□ -0.41
CDC42SE1-206ENST00000492796 COBLO75128 1261 aa12.46□□□□□ -0.41
CDC42SE1-206ENST00000492796 REC8O95072 547 aa12.46□□□□□ -0.41
CDC42SE1-206ENST00000492796 IGHA2P01877 340 aa12.46□□□□□ -0.41
CDC42SE1-206ENST00000492796 PARP1P09874 1014 aaKnown RBP12.46□□□□□ -0.41
CDC42SE1-206ENST00000492796 EN2P19622 333 aaPredicted RBP12.46□□□□□ -0.41
CDC42SE1-206ENST00000492796 MCM5P33992 734 aa12.46□□□□□ -0.41
CDC42SE1-206ENST00000492796 ANTXR2P58335 489 aa12.46□□□□□ -0.41
CDC42SE1-206ENST00000492796 CACNB2Q08289 660 aaPredicted RBP12.46□□□□□ -0.41
CDC42SE1-206ENST00000492796 TRIM32Q13049 653 aa12.46□□□□□ -0.41
CDC42SE1-206ENST00000492796 U2AF1L4Q8WU68 220 aaKnown RBP12.46□□□□□ -0.41
CDC42SE1-206ENST00000492796 MAML3Q96JK9 1138 aa12.46□□□□□ -0.41
CDC42SE1-206ENST00000492796 FLRT1Q9NZU1 646 aa12.46□□□□□ -0.41
CDC42SE1-206ENST00000492796 CCPG1Q9ULG6 757 aa12.46□□□□□ -0.41
CDC42SE1-206ENST00000492796 WDR19Q8NEZ3 1342 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 EPB41L2O43491 1005 aaKnown RBP12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 SGPL1O95470 568 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 SLC16A2P36021 539 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 SLC4A3P48751 1232 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 KRT32Q14532 448 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 ZNF792Q3KQV3 632 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 TSGA10IPQ3SY00 556 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 TMEM67Q5HYA8 995 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 CCDC174Q6PII3 467 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 ANKRD35Q8N283 1001 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 MSL3Q8N5Y2 521 aaKnown RBP12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 SHISA4Q96DD7 197 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 DDX11Q96FC9 970 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 TMEM87BQ96K49 555 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 AGBL1Q96MI9 1066 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 TRERF1Q96PN7 1200 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 RNF146Q9NTX7 359 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 CENPFP49454 3210 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 PDE4DIPQ5VU43 2346 aa12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 KIAA0100Q14667 2235 aaKnown RBP12.45□□□□□ -0.42
CDC42SE1-206ENST00000492796 PFASO15067 1338 aa12.44□□□□□ -0.42
CDC42SE1-206ENST00000492796 DNAJC25-GNG10A0A024R161 153 aa12.44□□□□□ -0.42
CDC42SE1-206ENST00000492796 PRC1O43663 620 aa12.44□□□□□ -0.42
CDC42SE1-206ENST00000492796 PGK2P07205 417 aa12.44□□□□□ -0.42
CDC42SE1-206ENST00000492796 GOLGA8HP0CJ92 632 aa12.44□□□□□ -0.42
CDC42SE1-206ENST00000492796 ALAS1P13196 640 aa12.44□□□□□ -0.42
CDC42SE1-206ENST00000492796 CHST3Q7LGC8 479 aa12.44□□□□□ -0.42
CDC42SE1-206ENST00000492796 CATIPQ7Z7H3 387 aa12.44□□□□□ -0.42
CDC42SE1-206ENST00000492796 IGDCC4Q8TDY8 1250 aa12.44□□□□□ -0.42
CDC42SE1-206ENST00000492796 DEFB118Q96PH6 123 aa12.44□□□□□ -0.42
CDC42SE1-206ENST00000492796 CRISPLD2Q9H0B8 497 aa12.44□□□□□ -0.42
CDC42SE1-206ENST00000492796 HOMER2Q9NSB8 354 aa12.44□□□□□ -0.42
CDC42SE1-206ENST00000492796 NRBP1Q9UHY1 535 aa12.44□□□□□ -0.42
CDC42SE1-206ENST00000492796 MYH6P13533 1939 aa12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 SH2B2O14492 632 aaPredicted RBP12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 MSCO60682 206 aa12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 CYBAP13498 195 aa12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 CCND3P30281 292 aaPredicted RBP12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 CYP2C19P33261 490 aa12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 LIFRP42702 1097 aa12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 SNAP25P60880 206 aa12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 TROAPQ12815 778 aa12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 GRM4Q14833 912 aa12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 ZNF467Q7Z7K2 595 aaPredicted RBP12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 TMTC2Q8N394 836 aa12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 ANKLE1Q8NAG6 615 aa12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 NEK1Q96PY6 1258 aa12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 MAP3K14Q99558 947 aa12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 TINF2Q9BSI4 451 aa12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 LY9Q9HBG7 655 aa12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 A1CFQ9NQ94 594 aaKnown RBP12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 MAD2L2Q9UI95 211 aa12.43□□□□□ -0.42
CDC42SE1-206ENST00000492796 SYNGAP1Q96PV0 1343 aa12.42□□□□□ -0.42
CDC42SE1-206ENST00000492796 PALM3A6NDB9 673 aaPredicted RBP12.42□□□□□ -0.42
CDC42SE1-206ENST00000492796 DDAH1O94760 285 aa12.42□□□□□ -0.42
CDC42SE1-206ENST00000492796 TFRCP02786 760 aaKnown RBP12.42□□□□□ -0.42
CDC42SE1-206ENST00000492796 HMGB1P09429 215 aaKnown RBP12.42□□□□□ -0.42
CDC42SE1-206ENST00000492796 HSPA4P34932 840 aa12.42□□□□□ -0.42
CDC42SE1-206ENST00000492796 CDC37Q16543 378 aaPredicted RBP12.42□□□□□ -0.42
CDC42SE1-206ENST00000492796 MAMDC4Q6UXC1 1216 aa12.42□□□□□ -0.42
CDC42SE1-206ENST00000492796 ADGRF4Q8IZF3 695 aa12.42□□□□□ -0.42
CDC42SE1-206ENST00000492796 KCNB2Q92953 911 aa12.42□□□□□ -0.42
CDC42SE1-206ENST00000492796 UBA5Q9GZZ9 404 aa12.42□□□□□ -0.42
CDC42SE1-206ENST00000492796 MAF1Q9H063 256 aa12.42□□□□□ -0.42
CDC42SE1-206ENST00000492796 SENP2Q9HC62 589 aa12.42□□□□□ -0.42
CDC42SE1-206ENST00000492796 BRCA2P51587 3418 aa12.42□□□□□ -0.42
CDC42SE1-206ENST00000492796 TNRC18O15417 2968 aaPredicted RBP12.42□□□□□ -0.42
CDC42SE1-206ENST00000492796 LCTP09848 1927 aa12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 CCDC69A6NI79 296 aa12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 LRRC37A2A6NM11 1700 aa12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 KLRF2D3W0D1 207 aa12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 POTEB2H3BUK9 544 aa12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 DHX16O60231 1041 aaKnown RBP12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 FARP2O94887 1054 aaPredicted RBP12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 KIF5BP33176 963 aa12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 MUM1L1Q5H9M0 696 aa12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 RASEFQ8IZ41 740 aa12.41□□□□□ -0.42
CDC42SE1-206ENST00000492796 ZNF654Q8IZM8 581 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms