RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 MCCP23508 829 aa9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 NT5C2P49902 561 aa9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 FAM109BQ6ICB4 259 aaPredicted RBP9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 ANKRD33Q7Z3H0 272 aa9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 RNF180Q86T96 592 aa9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 ZNF589Q86UQ0 364 aaPredicted RBP9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 CHD1LQ86WJ1 897 aa9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 MORC4Q8TE76 937 aa9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 AGBL1Q96MI9 1066 aa9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 TTC14Q96N46 770 aa9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 TOX2Q96NM4 488 aa9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 LNPKQ9C0E8 428 aa9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 UPF3AQ9H1J1 476 aaKnown RBP9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 ABHD16BQ9H3Z7 469 aa9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 ZBTB47Q9UFB7 747 aaPredicted RBP9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 FAM184BQ9ULE4 1060 aa9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 PRR12Q9ULL5 1215 aa9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 CNPY2Q9Y2B0 182 aa9.92□□□□□ -0.82
SMARCB1-207ENST00000491967 ASTN1O14525 1302 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 CCDC171Q6TFL3 1326 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 COL6A3P12111 3177 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 TRIM43BA6NCK2 446 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 SOWAHBA6NEL2 793 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 KIAA0355O15063 1070 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 CTAGE5O15320 804 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 PGK1P00558 417 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 SNHG28P0DPA3 235 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 TOP1P11387 765 aaKnown RBP9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 SDSP20132 328 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 CDK7P50613 346 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 MDM2Q00987 491 aaPredicted RBP9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 NMIQ13287 307 aaPredicted RBP9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 ACVR2BQ13705 512 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 TRIM60Q495X7 471 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 ANKRD35Q8N283 1001 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 DCAF4Q8WV16 495 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 ANKS1AQ92625 1134 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 TRIM43Q96BQ3 446 aaPredicted RBP9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 RANBP17Q9H2T7 1088 aaKnown RBP9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 ACAD9Q9H845 621 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 A1CFQ9NQ94 594 aaKnown RBP9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 PDLIM7Q9NR12 457 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 STX8Q9UNK0 236 aa9.91□□□□□ -0.82
SMARCB1-207ENST00000491967 LAMA2P24043 3122 aaKnown RBP9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 ELP1O95163 1332 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 SYNRGQ9UMZ2 1314 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 A0A1W2PQ45 241 aaPredicted RBP9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 A0A1W2PQY0 241 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 MOXD2PA6NHM9 499 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 RANBP6O60518 1105 aaKnown RBP9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 ICAM1P05362 532 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 ITGB8P26012 769 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 ACLYP53396 1101 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 GJA9P57773 515 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 CNTN2Q02246 1040 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 TLE2Q04725 743 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 CCDC144BQ3MJ40 725 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 AKNAD1Q5T1N1 836 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 KCTD1Q719H9 257 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 ARMCX2Q7L311 632 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 SH3RF1Q7Z6J0 888 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 CCDC144CPQ8IYA2 1237 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 FERMT2Q96AC1 680 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 LENG1Q96BZ8 264 aaPredicted RBP9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 TRERF1Q96PN7 1200 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 TMEM47Q9BQJ4 181 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 MTMR10Q9NXD2 777 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 CYP39A1Q9NYL5 469 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 GNEQ9Y223 722 aaKnown RBP9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 ATP11BQ9Y2G3 1177 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 LAMA4Q16363 1823 aa9.9□□□□□ -0.82
SMARCB1-207ENST00000491967 LRRC37A2A6NM11 1700 aa9.9□□□□□ -0.83
SMARCB1-207ENST00000491967 LOC102724159A0A0B4J2E5 919 aa9.89□□□□□ -0.83
SMARCB1-207ENST00000491967 PDHBP11177 359 aa9.89□□□□□ -0.83
SMARCB1-207ENST00000491967 FAAP100Q0VG06 881 aa9.89□□□□□ -0.83
SMARCB1-207ENST00000491967 PWP2Q15269 919 aaKnown RBP9.89□□□□□ -0.83
SMARCB1-207ENST00000491967 KCNA10Q16322 511 aa9.89□□□□□ -0.83
SMARCB1-207ENST00000491967 MUM1L1Q5H9M0 696 aa9.89□□□□□ -0.83
SMARCB1-207ENST00000491967 TTBK2Q6IQ55 1244 aa9.89□□□□□ -0.83
SMARCB1-207ENST00000491967 RASGRP2Q7LDG7 609 aa9.89□□□□□ -0.83
SMARCB1-207ENST00000491967 DGKHQ86XP1 1220 aa9.89□□□□□ -0.83
SMARCB1-207ENST00000491967 EXOC6Q8TAG9 804 aa9.89□□□□□ -0.83
SMARCB1-207ENST00000491967 LBHD1Q9BQE6 289 aaPredicted RBP9.89□□□□□ -0.83
SMARCB1-207ENST00000491967 RNF146Q9NTX7 359 aa9.89□□□□□ -0.83
SMARCB1-207ENST00000491967 Q9Y3F1 56 aa9.89□□□□□ -0.83
SMARCB1-207ENST00000491967 CTDP1Q9Y5B0 961 aaPredicted RBP9.89□□□□□ -0.83
SMARCB1-207ENST00000491967 MYADML2A6NDP7 307 aa9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 ASB14A6NK59 587 aa9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 CLTBP09497 229 aa9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 MFAP1P55081 439 aaKnown RBP9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 ZNF543Q08ER8 600 aa9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 SHHQ15465 462 aa9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 TAPT1Q6NXT6 567 aa9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 MFSD6Q6ZSS7 791 aa9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 TBC1D10CQ8IV04 446 aa9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 DEFB123Q8N688 67 aa9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 SLC43A3Q8NBI5 491 aa9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 PCSK9Q8NBP7 692 aaKnown RBP9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 NUP133Q8WUM0 1156 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms