RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 SYDE2Q5VT97 1194 aa21.75■■□□□ 1.07
NDUFB4-204ENST00000491335 CHST13Q8NET6 341 aa21.75■■□□□ 1.07
NDUFB4-204ENST00000491335 ANO2Q9NQ90 1003 aa21.75■■□□□ 1.07
NDUFB4-204ENST00000491335 HOMER2Q9NSB8 354 aa21.75■■□□□ 1.07
NDUFB4-204ENST00000491335 GOLGA8HP0CJ92 632 aa21.74■■□□□ 1.07
NDUFB4-204ENST00000491335 RALYLQ86SE5 291 aaKnown RBP21.74■■□□□ 1.07
NDUFB4-204ENST00000491335 TRPV1Q8NER1 839 aa21.74■■□□□ 1.07
NDUFB4-204ENST00000491335 NCOA7Q8NI08 942 aa21.74■■□□□ 1.07
NDUFB4-204ENST00000491335 DDX11Q96FC9 970 aa21.74■■□□□ 1.07
NDUFB4-204ENST00000491335 FBXO40Q9UH90 709 aa21.74■■□□□ 1.07
NDUFB4-204ENST00000491335 MKI67P46013 3256 aaKnown RBP21.73■■□□□ 1.07
NDUFB4-204ENST00000491335 ALAS1P13196 640 aa21.73■■□□□ 1.07
NDUFB4-204ENST00000491335 CAPN2P17655 700 aa21.73■■□□□ 1.07
NDUFB4-204ENST00000491335 GPATCH4Q5T3I0 446 aaKnown RBP21.73■■□□□ 1.07
NDUFB4-204ENST00000491335 IFIT1BQ5T764 474 aaKnown RBP21.73■■□□□ 1.07
NDUFB4-204ENST00000491335 CASC1Q6TDU7 716 aa21.73■■□□□ 1.07
NDUFB4-204ENST00000491335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.73■■□□□ 1.07
NDUFB4-204ENST00000491335 RANBP17Q9H2T7 1088 aaKnown RBP21.73■■□□□ 1.07
NDUFB4-204ENST00000491335 DIS3Q9Y2L1 958 aaKnown RBP21.73■■□□□ 1.07
NDUFB4-204ENST00000491335 DNAJC25-GNG10A0A024R161 153 aa21.72■■□□□ 1.07
NDUFB4-204ENST00000491335 IFIT3O14879 490 aaKnown RBP21.72■■□□□ 1.07
NDUFB4-204ENST00000491335 SLC27A2O14975 620 aa21.72■■□□□ 1.07
NDUFB4-204ENST00000491335 FARP2O94887 1054 aaPredicted RBP21.72■■□□□ 1.07
NDUFB4-204ENST00000491335 NECTIN1Q15223 517 aa21.72■■□□□ 1.07
NDUFB4-204ENST00000491335 PRAMEF19Q5SWL8 479 aa21.72■■□□□ 1.07
NDUFB4-204ENST00000491335 CHST3Q7LGC8 479 aa21.72■■□□□ 1.07
NDUFB4-204ENST00000491335 UBE2Q1Q7Z7E8 422 aa21.72■■□□□ 1.07
NDUFB4-204ENST00000491335 ANKRD35Q8N283 1001 aa21.72■■□□□ 1.07
NDUFB4-204ENST00000491335 TRERF1Q96PN7 1200 aa21.72■■□□□ 1.07
NDUFB4-204ENST00000491335 UBA5Q9GZZ9 404 aa21.72■■□□□ 1.07
NDUFB4-204ENST00000491335 RNF146Q9NTX7 359 aa21.72■■□□□ 1.07
NDUFB4-204ENST00000491335 ICAM1P05362 532 aa21.71■■□□□ 1.07
NDUFB4-204ENST00000491335 CYBAP13498 195 aa21.71■■□□□ 1.07
NDUFB4-204ENST00000491335 TAL1P17542 331 aaPredicted RBP21.71■■□□□ 1.07
NDUFB4-204ENST00000491335 CNGA1P29973 690 aa21.71■■□□□ 1.07
NDUFB4-204ENST00000491335 TKFCQ3LXA3 575 aa21.71■■□□□ 1.07
NDUFB4-204ENST00000491335 CREB3L3Q68CJ9 461 aa21.71■■□□□ 1.07
NDUFB4-204ENST00000491335 LHX8Q68G74 356 aa21.71■■□□□ 1.07
NDUFB4-204ENST00000491335 CPVLQ9H3G5 476 aa21.71■■□□□ 1.07
NDUFB4-204ENST00000491335 ACAD9Q9H845 621 aa21.71■■□□□ 1.07
NDUFB4-204ENST00000491335 OGDHLQ9ULD0 1010 aa21.71■■□□□ 1.07
NDUFB4-204ENST00000491335 CCPG1Q9ULG6 757 aa21.71■■□□□ 1.07
NDUFB4-204ENST00000491335 ANTXR2P58335 489 aa21.7■■□□□ 1.06
NDUFB4-204ENST00000491335 MB21D2Q8IYB1 491 aaPredicted RBP21.7■■□□□ 1.06
NDUFB4-204ENST00000491335 TINF2Q9BSI4 451 aa21.7■■□□□ 1.06
NDUFB4-204ENST00000491335 SENP2Q9HC62 589 aa21.7■■□□□ 1.06
NDUFB4-204ENST00000491335 PARP1P09874 1014 aaKnown RBP21.69■■□□□ 1.06
NDUFB4-204ENST00000491335 ASPRV1Q53RT3 343 aa21.69■■□□□ 1.06
NDUFB4-204ENST00000491335 MUM1L1Q5H9M0 696 aa21.69■■□□□ 1.06
NDUFB4-204ENST00000491335 ERICH2A1L162 156 aa21.68■■□□□ 1.06
NDUFB4-204ENST00000491335 WTAPQ15007 396 aa21.68■■□□□ 1.06
NDUFB4-204ENST00000491335 SART3Q15020 963 aaKnown RBP21.68■■□□□ 1.06
NDUFB4-204ENST00000491335 ANKLE1Q8NAG6 615 aa21.68■■□□□ 1.06
NDUFB4-204ENST00000491335 IGDCC4Q8TDY8 1250 aa21.68■■□□□ 1.06
NDUFB4-204ENST00000491335 DIS3LQ8TF46 1054 aaKnown RBP21.68■■□□□ 1.06
NDUFB4-204ENST00000491335 PAWRQ96IZ0 340 aaKnown RBP21.68■■□□□ 1.06
NDUFB4-204ENST00000491335 A1CFQ9NQ94 594 aaKnown RBP21.68■■□□□ 1.06
NDUFB4-204ENST00000491335 DDX20Q9UHI6 824 aaKnown RBP21.68■■□□□ 1.06
NDUFB4-204ENST00000491335 MCM3APO60318 1980 aa21.67■■□□□ 1.06
NDUFB4-204ENST00000491335 MNX1P50219 401 aaPredicted RBP21.67■■□□□ 1.06
NDUFB4-204ENST00000491335 CNTN2Q02246 1040 aa21.67■■□□□ 1.06
NDUFB4-204ENST00000491335 COL9A3Q14050 684 aaPredicted RBP21.67■■□□□ 1.06
NDUFB4-204ENST00000491335 TMEM67Q5HYA8 995 aa21.67■■□□□ 1.06
NDUFB4-204ENST00000491335 STAG2Q8N3U4 1231 aa21.67■■□□□ 1.06
NDUFB4-204ENST00000491335 FGD4Q96M96 766 aa21.67■■□□□ 1.06
NDUFB4-204ENST00000491335 POTEB2H3BUK9 544 aa21.66■■□□□ 1.06
NDUFB4-204ENST00000491335 MSCO60682 206 aa21.66■■□□□ 1.06
NDUFB4-204ENST00000491335 ZNF467Q7Z7K2 595 aaPredicted RBP21.66■■□□□ 1.06
NDUFB4-204ENST00000491335 ADGRF4Q8IZF3 695 aa21.66■■□□□ 1.06
NDUFB4-204ENST00000491335 FAM133AQ8N9E0 248 aa21.66■■□□□ 1.06
NDUFB4-204ENST00000491335 FRMPD3Q5JV73 1810 aa21.66■■□□□ 1.06
NDUFB4-204ENST00000491335 SEPT4O43236 478 aa21.65■■□□□ 1.06
NDUFB4-204ENST00000491335 PRC1O43663 620 aa21.65■■□□□ 1.06
NDUFB4-204ENST00000491335 SNAI1O95863 264 aaPredicted RBP21.65■■□□□ 1.06
NDUFB4-204ENST00000491335 RNF20Q5VTR2 975 aa21.65■■□□□ 1.06
NDUFB4-204ENST00000491335 ANO1Q5XXA6 986 aa21.65■■□□□ 1.06
NDUFB4-204ENST00000491335 MAMDC4Q6UXC1 1216 aa21.65■■□□□ 1.06
NDUFB4-204ENST00000491335 NSMFQ6X4W1 530 aa21.65■■□□□ 1.06
NDUFB4-204ENST00000491335 NECAB2Q7Z6G3 386 aa21.65■■□□□ 1.06
NDUFB4-204ENST00000491335 MSL3Q8N5Y2 521 aaKnown RBP21.65■■□□□ 1.06
NDUFB4-204ENST00000491335 VAT1LQ9HCJ6 419 aa21.65■■□□□ 1.06
NDUFB4-204ENST00000491335 GPHNQ9NQX3 736 aaPredicted RBP21.65■■□□□ 1.06
NDUFB4-204ENST00000491335 NRBP1Q9UHY1 535 aa21.65■■□□□ 1.06
NDUFB4-204ENST00000491335 MYH6P13533 1939 aa21.65■■□□□ 1.06
NDUFB4-204ENST00000491335 BAZ2BQ9UIF8 2168 aaKnown RBP21.64■■□□□ 1.06
NDUFB4-204ENST00000491335 PFASO15067 1338 aa21.64■■□□□ 1.05
NDUFB4-204ENST00000491335 WDR19Q8NEZ3 1342 aa21.64■■□□□ 1.05
NDUFB4-204ENST00000491335 KLRF2D3W0D1 207 aa21.64■■□□□ 1.05
NDUFB4-204ENST00000491335 MCM5P33992 734 aa21.64■■□□□ 1.05
NDUFB4-204ENST00000491335 JMJD4Q9H9V9 463 aa21.64■■□□□ 1.05
NDUFB4-204ENST00000491335 CYP39A1Q9NYL5 469 aa21.64■■□□□ 1.05
NDUFB4-204ENST00000491335 MAD2L2Q9UI95 211 aa21.64■■□□□ 1.05
NDUFB4-204ENST00000491335 PNMA2Q9UL42 364 aa21.64■■□□□ 1.05
NDUFB4-204ENST00000491335 SYNGAP1Q96PV0 1343 aa21.63■■□□□ 1.05
NDUFB4-204ENST00000491335 PALM3A6NDB9 673 aaPredicted RBP21.63■■□□□ 1.05
NDUFB4-204ENST00000491335 SOWAHBA6NEL2 793 aa21.63■■□□□ 1.05
NDUFB4-204ENST00000491335 NFIBO00712 420 aa21.63■■□□□ 1.05
NDUFB4-204ENST00000491335 DHX16O60231 1041 aaKnown RBP21.63■■□□□ 1.05
NDUFB4-204ENST00000491335 ZNF865P0CJ78 1059 aaPredicted RBP21.63■■□□□ 1.05
NDUFB4-204ENST00000491335 GRM4Q14833 912 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms