RNA–Protein interactions for RNA: ENST00000490980.1

FRAT1-202, Transcript of FRAT1, WNT signaling pathway regulator, humanhuman

TSL 2

Gene FRAT1, Length 633 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAT1-202ENST00000490980 TMTC2Q8N394 836 aa16.45■□□□□ 0.22
FRAT1-202ENST00000490980 NPLOC4Q8TAT6 608 aa16.45■□□□□ 0.22
FRAT1-202ENST00000490980 AGBL1Q96MI9 1066 aa16.45■□□□□ 0.22
FRAT1-202ENST00000490980 TMEM106CQ9BVX2 250 aa16.45■□□□□ 0.22
FRAT1-202ENST00000490980 LY9Q9HBG7 655 aa16.45■□□□□ 0.22
FRAT1-202ENST00000490980 PNMA2Q9UL42 364 aa16.45■□□□□ 0.22
FRAT1-202ENST00000490980 FRMPD3Q5JV73 1810 aa16.45■□□□□ 0.22
FRAT1-202ENST00000490980 MYCP01106 439 aaPredicted RBP16.44■□□□□ 0.22
FRAT1-202ENST00000490980 ICAM1P05362 532 aa16.44■□□□□ 0.22
FRAT1-202ENST00000490980 HMGB1P09429 215 aaKnown RBP16.44■□□□□ 0.22
FRAT1-202ENST00000490980 CCL5P13501 91 aa16.44■□□□□ 0.22
FRAT1-202ENST00000490980 COL9A3Q14050 684 aaPredicted RBP16.44■□□□□ 0.22
FRAT1-202ENST00000490980 GRM4Q14833 912 aa16.44■□□□□ 0.22
FRAT1-202ENST00000490980 MTFR1Q15390 333 aa16.44■□□□□ 0.22
FRAT1-202ENST00000490980 CCL14Q16627 93 aa16.44■□□□□ 0.22
FRAT1-202ENST00000490980 ADCK5Q3MIX3 580 aa16.44■□□□□ 0.22
FRAT1-202ENST00000490980 UBA5Q9GZZ9 404 aa16.44■□□□□ 0.22
FRAT1-202ENST00000490980 CCPG1Q9ULG6 757 aa16.44■□□□□ 0.22
FRAT1-202ENST00000490980 SNX14Q9Y5W7 946 aa16.44■□□□□ 0.22
FRAT1-202ENST00000490980 LCTP09848 1927 aa16.43■□□□□ 0.22
FRAT1-202ENST00000490980 PALM3A6NDB9 673 aaPredicted RBP16.43■□□□□ 0.22
FRAT1-202ENST00000490980 KLRF2D3W0D1 207 aa16.43■□□□□ 0.22
FRAT1-202ENST00000490980 COBLO75128 1261 aa16.43■□□□□ 0.22
FRAT1-202ENST00000490980 ALAS1P13196 640 aa16.43■□□□□ 0.22
FRAT1-202ENST00000490980 LIFRP42702 1097 aa16.43■□□□□ 0.22
FRAT1-202ENST00000490980 TROAPQ12815 778 aa16.43■□□□□ 0.22
FRAT1-202ENST00000490980 DHX32Q7L7V1 743 aaKnown RBP16.43■□□□□ 0.22
FRAT1-202ENST00000490980 ZNF654Q8IZM8 581 aa16.43■□□□□ 0.22
FRAT1-202ENST00000490980 DDX11Q96FC9 970 aa16.43■□□□□ 0.22
FRAT1-202ENST00000490980 UNC93B1Q9H1C4 597 aa16.43■□□□□ 0.22
FRAT1-202ENST00000490980 CPVLQ9H3G5 476 aa16.43■□□□□ 0.22
FRAT1-202ENST00000490980 ACAD9Q9H845 621 aa16.43■□□□□ 0.22
FRAT1-202ENST00000490980 GPHNQ9NQX3 736 aaPredicted RBP16.43■□□□□ 0.22
FRAT1-202ENST00000490980 HOMER2Q9NSB8 354 aa16.43■□□□□ 0.22
FRAT1-202ENST00000490980 RNF146Q9NTX7 359 aa16.43■□□□□ 0.22
FRAT1-202ENST00000490980 MAD2L2Q9UI95 211 aa16.43■□□□□ 0.22
FRAT1-202ENST00000490980 CCDC69A6NI79 296 aa16.42■□□□□ 0.22
FRAT1-202ENST00000490980 EIF5BO60841 1220 aaKnown RBP16.42■□□□□ 0.22
FRAT1-202ENST00000490980 DDAH1O94760 285 aa16.42■□□□□ 0.22
FRAT1-202ENST00000490980 EXOSC10Q01780 885 aaKnown RBP16.42■□□□□ 0.22
FRAT1-202ENST00000490980 TRIM32Q13049 653 aa16.42■□□□□ 0.22
FRAT1-202ENST00000490980 MAP3K21Q5TCX8 1036 aa16.42■□□□□ 0.22
FRAT1-202ENST00000490980 MFSD14CQ5VZR4 134 aa16.42■□□□□ 0.22
FRAT1-202ENST00000490980 OLFML2BQ68BL8 750 aa16.42■□□□□ 0.22
FRAT1-202ENST00000490980 NFXL1Q6ZNB6 911 aa16.42■□□□□ 0.22
FRAT1-202ENST00000490980 ADGRF4Q8IZF3 695 aa16.42■□□□□ 0.22
FRAT1-202ENST00000490980 ANKRD35Q8N283 1001 aa16.42■□□□□ 0.22
FRAT1-202ENST00000490980 STAG2Q8N3U4 1231 aa16.42■□□□□ 0.22
FRAT1-202ENST00000490980 MAML3Q96JK9 1138 aa16.42■□□□□ 0.22
FRAT1-202ENST00000490980 TRERF1Q96PN7 1200 aa16.42■□□□□ 0.22
FRAT1-202ENST00000490980 MAP3K14Q99558 947 aa16.42■□□□□ 0.22
FRAT1-202ENST00000490980 USP26Q9BXU7 913 aa16.42■□□□□ 0.22
FRAT1-202ENST00000490980 RNF208Q9H0X6 261 aa16.42■□□□□ 0.22
FRAT1-202ENST00000490980 FLRT1Q9NZU1 646 aa16.42■□□□□ 0.22
FRAT1-202ENST00000490980 DIS3Q9Y2L1 958 aaKnown RBP16.42■□□□□ 0.22
FRAT1-202ENST00000490980 DNAJC25-GNG10A0A024R161 153 aa16.41■□□□□ 0.22
FRAT1-202ENST00000490980 POTEFA5A3E0 1075 aa16.41■□□□□ 0.22
FRAT1-202ENST00000490980 DHX16O60231 1041 aaKnown RBP16.41■□□□□ 0.22
FRAT1-202ENST00000490980 PGK2P07205 417 aa16.41■□□□□ 0.22
FRAT1-202ENST00000490980 PRKAR2AP13861 404 aaKnown RBP16.41■□□□□ 0.22
FRAT1-202ENST00000490980 CDC37Q16543 378 aaPredicted RBP16.41■□□□□ 0.22
FRAT1-202ENST00000490980 ZNF792Q3KQV3 632 aa16.41■□□□□ 0.22
FRAT1-202ENST00000490980 SGMS1Q86VZ5 419 aa16.41■□□□□ 0.22
FRAT1-202ENST00000490980 JAKMIP1Q96N16 626 aaKnown RBP16.41■□□□□ 0.22
FRAT1-202ENST00000490980 LRRC2Q9BYS8 371 aa16.41■□□□□ 0.22
FRAT1-202ENST00000490980 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.41■□□□□ 0.22
FRAT1-202ENST00000490980 HMX1Q9NP08 348 aaPredicted RBP16.41■□□□□ 0.22
FRAT1-202ENST00000490980 RPTORQ8N122 1335 aa16.41■□□□□ 0.22
FRAT1-202ENST00000490980 IGHA2P01877 340 aa16.4■□□□□ 0.22
FRAT1-202ENST00000490980 GJB1P08034 283 aa16.4■□□□□ 0.22
FRAT1-202ENST00000490980 CALM1P0DP23 149 aa16.4■□□□□ 0.22
FRAT1-202ENST00000490980 CALM2P0DP24 149 aa16.4■□□□□ 0.22
FRAT1-202ENST00000490980 CALM3P0DP25 149 aa16.4■□□□□ 0.22
FRAT1-202ENST00000490980 RGS19P49795 217 aa16.4■□□□□ 0.22
FRAT1-202ENST00000490980 CACNB2Q08289 660 aaPredicted RBP16.4■□□□□ 0.22
FRAT1-202ENST00000490980 BLOC1S2Q6QNY1 142 aa16.4■□□□□ 0.22
FRAT1-202ENST00000490980 CTCFLQ8NI51 663 aaPredicted RBP16.4■□□□□ 0.22
FRAT1-202ENST00000490980 NUP133Q8WUM0 1156 aa16.4■□□□□ 0.22
FRAT1-202ENST00000490980 JMJD4Q9H9V9 463 aa16.4■□□□□ 0.22
FRAT1-202ENST00000490980 PAK6Q9NQU5 681 aaPredicted RBP16.4■□□□□ 0.22
FRAT1-202ENST00000490980 MCM3APO60318 1980 aa16.4■□□□□ 0.22
FRAT1-202ENST00000490980 PFASO15067 1338 aa16.4■□□□□ 0.22
FRAT1-202ENST00000490980 PSMA5P28066 241 aa16.39■□□□□ 0.21
FRAT1-202ENST00000490980 KIF5BP33176 963 aa16.39■□□□□ 0.21
FRAT1-202ENST00000490980 QRICH1Q2TAL8 776 aa16.39■□□□□ 0.21
FRAT1-202ENST00000490980 MUM1L1Q5H9M0 696 aa16.39■□□□□ 0.21
FRAT1-202ENST00000490980 TCEANC2Q96MN5 208 aa16.39■□□□□ 0.21
FRAT1-202ENST00000490980 MYL10Q9BUA6 226 aa16.39■□□□□ 0.21
FRAT1-202ENST00000490980 VAT1LQ9HCJ6 419 aa16.39■□□□□ 0.21
FRAT1-202ENST00000490980 A1CFQ9NQ94 594 aaKnown RBP16.39■□□□□ 0.21
FRAT1-202ENST00000490980 SLC12A7Q9Y666 1083 aa16.39■□□□□ 0.21
FRAT1-202ENST00000490980 LRRC37A2A6NM11 1700 aa16.39■□□□□ 0.21
FRAT1-202ENST00000490980 HTTP42858 3142 aa16.39■□□□□ 0.21
FRAT1-202ENST00000490980 TAL1P17542 331 aaPredicted RBP16.38■□□□□ 0.21
FRAT1-202ENST00000490980 CAPN2P17655 700 aa16.38■□□□□ 0.21
FRAT1-202ENST00000490980 CYP2C19P33261 490 aa16.38■□□□□ 0.21
FRAT1-202ENST00000490980 GJA8P48165 433 aa16.38■□□□□ 0.21
FRAT1-202ENST00000490980 SYNE3Q6ZMZ3 975 aa16.38■□□□□ 0.21
FRAT1-202ENST00000490980 ZNF467Q7Z7K2 595 aaPredicted RBP16.38■□□□□ 0.21
FRAT1-202ENST00000490980 MTMR8Q96EF0 704 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms