RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 MUM1L1Q5H9M0 696 aa10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 ALDH8A1Q9H2A2 487 aaPredicted RBP10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 CHD9Q3L8U1 2897 aa10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 LOC102724159A0A0B4J2E5 919 aa10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 STAT2P52630 851 aa10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 SNX17Q15036 470 aa10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 PWP2Q15269 919 aaKnown RBP10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 TKFCQ3LXA3 575 aa10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 RUFY2Q8WXA3 655 aa10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 USP26Q9BXU7 913 aa10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 UPF3AQ9H1J1 476 aaKnown RBP10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 PFASO15067 1338 aa10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 RPTORQ8N122 1335 aa10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 SOWAHBA6NEL2 793 aa10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 CDC45O75419 566 aa10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 FLOT1O75955 427 aa10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 EN2P19622 333 aaPredicted RBP10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 ARHGEF6Q15052 776 aa10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 CCDC178Q5BJE1 867 aa10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 CHST13Q8NET6 341 aa10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 TEX13BQ9BXU2 312 aa10.83□□□□□ -0.68
SUPT20H-220ENST00000490716 TSPY2A6NKD2 308 aa10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 TNPO2O14787 897 aaKnown RBP10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 SGPL1O95470 568 aa10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 ANKLE1Q8NAG6 615 aa10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 JMJD4Q9H9V9 463 aa10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 CCND3P30281 292 aaPredicted RBP10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 STAG2Q8N3U4 1231 aa10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 NUDT12Q9BQG2 462 aa10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 MCCP23508 829 aa10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 STAT3P40763 770 aa10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 RGS2P41220 211 aa10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 HSD17B4P51659 736 aa10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 KIF22Q14807 665 aa10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 C1orf53Q5VUE5 145 aa10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 KCTD1Q719H9 257 aa10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 AGBL1Q96MI9 1066 aa10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 FEZ1Q99689 392 aa10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 GPHNQ9NQX3 736 aaPredicted RBP10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 CYP39A1Q9NYL5 469 aa10.82□□□□□ -0.68
SUPT20H-220ENST00000490716 RCAN1P53805 252 aa10.81□□□□□ -0.68
SUPT20H-220ENST00000490716 SLC9C1Q4G0N8 1177 aa10.81□□□□□ -0.68
SUPT20H-220ENST00000490716 COA7Q96BR5 231 aa10.81□□□□□ -0.68
SUPT20H-220ENST00000490716 STK11IPQ8N1F8 1099 aa10.81□□□□□ -0.68
SUPT20H-220ENST00000490716 PNMA1Q8ND90 353 aa10.81□□□□□ -0.68
SUPT20H-220ENST00000490716 KIF2CQ99661 725 aa10.81□□□□□ -0.68
SUPT20H-220ENST00000490716 A1CFQ9NQ94 594 aaKnown RBP10.81□□□□□ -0.68
SUPT20H-220ENST00000490716 SNX14Q9Y5W7 946 aa10.81□□□□□ -0.68
SUPT20H-220ENST00000490716 FMNL1O95466 1100 aaPredicted RBP10.81□□□□□ -0.68
SUPT20H-220ENST00000490716 TAPT1Q6NXT6 567 aa10.81□□□□□ -0.68
SUPT20H-220ENST00000490716 KLHDC9Q8NEP7 349 aa10.81□□□□□ -0.68
SUPT20H-220ENST00000490716 GBF1Q92538 1859 aa10.81□□□□□ -0.68
SUPT20H-220ENST00000490716 TMEM232C9JQI7 657 aa10.8□□□□□ -0.68
SUPT20H-220ENST00000490716 RANBP6O60518 1105 aaKnown RBP10.8□□□□□ -0.68
SUPT20H-220ENST00000490716 ADAMTS4O75173 837 aa10.8□□□□□ -0.68
SUPT20H-220ENST00000490716 TAL1P17542 331 aaPredicted RBP10.8□□□□□ -0.68
SUPT20H-220ENST00000490716 ASPRV1Q53RT3 343 aa10.8□□□□□ -0.68
SUPT20H-220ENST00000490716 GPATCH4Q5T3I0 446 aaKnown RBP10.8□□□□□ -0.68
SUPT20H-220ENST00000490716 SYDE2Q5VT97 1194 aa10.8□□□□□ -0.68
SUPT20H-220ENST00000490716 ADGRF4Q8IZF3 695 aa10.8□□□□□ -0.68
SUPT20H-220ENST00000490716 ZKSCAN3Q9BRR0 538 aa10.8□□□□□ -0.68
SUPT20H-220ENST00000490716 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.8□□□□□ -0.68
SUPT20H-220ENST00000490716 GNEQ9Y223 722 aaKnown RBP10.8□□□□□ -0.68
SUPT20H-220ENST00000490716 CCNA1P78396 465 aa10.8□□□□□ -0.68
SUPT20H-220ENST00000490716 C8orf34Q49A92 452 aa10.8□□□□□ -0.68
SUPT20H-220ENST00000490716 COL20A1Q9P218 1284 aa10.8□□□□□ -0.68
SUPT20H-220ENST00000490716 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.8□□□□□ -0.68
SUPT20H-220ENST00000490716 BRPF3Q9ULD4 1205 aa10.8□□□□□ -0.68
SUPT20H-220ENST00000490716 CST5P28325 142 aaPredicted RBP10.79□□□□□ -0.68
SUPT20H-220ENST00000490716 NCOA7Q8NI08 942 aa10.79□□□□□ -0.68
SUPT20H-220ENST00000490716 CRYGNQ8WXF5 182 aa10.79□□□□□ -0.68
SUPT20H-220ENST00000490716 SPZ1Q9BXG8 430 aa10.79□□□□□ -0.68
SUPT20H-220ENST00000490716 CHURC1Q8WUH1 139 aa10.79□□□□□ -0.68
SUPT20H-220ENST00000490716 CCDC136Q96JN2 1154 aa10.79□□□□□ -0.68
SUPT20H-220ENST00000490716 RAVER2Q9HCJ3 691 aaKnown RBP10.79□□□□□ -0.68
SUPT20H-220ENST00000490716 ZSWIM6Q9HCJ5 1215 aa10.79□□□□□ -0.68
SUPT20H-220ENST00000490716 ZBTB47Q9UFB7 747 aaPredicted RBP10.79□□□□□ -0.68
SUPT20H-220ENST00000490716 TRANK1O15050 2925 aa10.79□□□□□ -0.68
SUPT20H-220ENST00000490716 EDIL3O43854 480 aa10.79□□□□□ -0.68
SUPT20H-220ENST00000490716 DDAH1O94760 285 aa10.79□□□□□ -0.68
SUPT20H-220ENST00000490716 SLC1A4P43007 532 aa10.79□□□□□ -0.68
SUPT20H-220ENST00000490716 SOX10P56693 466 aa10.79□□□□□ -0.68
SUPT20H-220ENST00000490716 NTRK3Q16288 839 aa10.79□□□□□ -0.68
SUPT20H-220ENST00000490716 SNRNP48Q6IEG0 339 aaKnown RBP10.79□□□□□ -0.68
SUPT20H-220ENST00000490716 U2AF1L4Q8WU68 220 aaKnown RBP10.79□□□□□ -0.68
SUPT20H-220ENST00000490716 SAMD3Q8N6K7 520 aa10.78□□□□□ -0.68
SUPT20H-220ENST00000490716 TMEM87BQ96K49 555 aa10.78□□□□□ -0.68
SUPT20H-220ENST00000490716 BCL11AQ9H165 835 aa10.78□□□□□ -0.68
SUPT20H-220ENST00000490716 BAZ2BQ9UIF8 2168 aaKnown RBP10.78□□□□□ -0.68
SUPT20H-220ENST00000490716 TOB2Q14106 344 aaPredicted RBP10.78□□□□□ -0.68
SUPT20H-220ENST00000490716 SLC43A3Q8NBI5 491 aa10.78□□□□□ -0.68
SUPT20H-220ENST00000490716 RAET1EQ8TD07 263 aa10.78□□□□□ -0.68
SUPT20H-220ENST00000490716 PAGR1Q9BTK6 254 aa10.78□□□□□ -0.68
SUPT20H-220ENST00000490716 TM6SF1Q9BZW5 370 aa10.78□□□□□ -0.68
SUPT20H-220ENST00000490716 MYH15Q9Y2K3 1946 aa10.78□□□□□ -0.68
SUPT20H-220ENST00000490716 PRUNE2Q8WUY3 3088 aa10.78□□□□□ -0.68
SUPT20H-220ENST00000490716 FRMPD2Q68DX3 1309 aaPredicted RBP10.78□□□□□ -0.68
SUPT20H-220ENST00000490716 NFIBO00712 420 aa10.78□□□□□ -0.68
SUPT20H-220ENST00000490716 HOXD8P13378 290 aaPredicted RBP10.78□□□□□ -0.68
SUPT20H-220ENST00000490716 PRKAR2AP13861 404 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms