RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 TEX9Q8N6V9 391 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 B4GALNT2Q8NHY0 566 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 RHPN1Q8TCX5 695 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 DDX54Q8TDD1 881 aaKnown RBP5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 ZNF526Q8TF50 670 aaPredicted RBP5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 CCDC51Q96ER9 411 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 DTNBP1Q96EV8 351 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 ANKRD27Q96NW4 1050 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 PLEKHG4BQ96PX9 1271 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 NUP58Q9BVL2 599 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 MOV10L1Q9BXT6 1211 aaKnown RBP5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 NOD2Q9HC29 1040 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 HAUS2Q9NVX0 235 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 BLOC1S6Q9UL45 172 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 LRRC7Q96NW7 1537 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 ZNF335Q9H4Z2 1342 aaPredicted RBP5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 SBNO1A3KN83 1393 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 ZSCAN9O15535 394 aaPredicted RBP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 DKK1O94907 266 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 ANP32DO95626 131 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 SSBP05455 408 aaKnown RBP eCLIP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 PYGLP06737 847 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 MDH1P40925 334 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 SCTRP47872 440 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 ELF3P78545 371 aaPredicted RBP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 MYO1EQ12965 1108 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 NNTQ13423 1086 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 MTF1Q14872 753 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 STK38Q15208 465 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 AMOTQ4VCS5 1084 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 HSP90AB4PQ58FF6 505 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 TTMPQ5BVD1 217 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 IQCEQ6IPM2 695 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 BRICD5Q6PL45 260 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 TRAF7Q6Q0C0 670 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 NBPF15Q8N660 670 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 LINC00301Q8NCQ3 95 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 CNKSR1Q969H4 720 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 ARL8AQ96BM9 186 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 EVI5LQ96CN4 794 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 BICD1Q96G01 975 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 RUFY1Q96T51 708 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 TSC22D3Q99576 134 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 MTRQ99707 1265 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 TSGA10Q9BZW7 698 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 YIPF3Q9GZM5 350 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 IL1RAPL2Q9NP60 686 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 C3P01024 1663 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 ATP5J2-PTCD1G3V325 749 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 H3BRB1 525 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 STXBP3O00186 592 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 PSMD14O00487 310 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 ABLIM1O14639 778 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 SPTLC2O15270 562 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 GFRA3O60609 400 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 LINGO3P0C6S8 592 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 GNAT1P11488 350 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 ZNF18P17022 549 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 Q3C1V9 767 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 LRRC23Q53EV4 343 aaPredicted RBP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 GLE1Q53GS7 698 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 NUTM2GQ5VZR2 741 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 PAPD7Q5XG87 772 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 MSL1Q68DK7 614 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 NCAPH2Q6IBW4 605 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 EMBQ6PCB8 327 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 ARMC9Q7Z3E5 817 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 CD302Q8IX05 232 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 SCUBE3Q8IX30 993 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 ELOA2Q8IYF1 753 aaPredicted RBP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 MMGT1Q8N4V1 131 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 ADAM32Q8TC27 787 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 ENOX1Q8TC92 643 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 MIPOL1Q8TD10 442 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 TBC1D5Q92609 795 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 TBC1D31Q96DN5 1066 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 THAP11Q96EK4 314 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 STAMBPL1Q96FJ0 436 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 RBM41Q96IZ5 413 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 RNPC3Q96LT9 517 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 CCDC85AQ96PX6 553 aaPredicted RBP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 MMS19Q96T76 1030 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 CDC5LQ99459 802 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 GORASP1Q9BQQ3 440 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 MKNK1Q9BUB5 465 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 CDCA7Q9BWT1 371 aaPredicted RBP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 OSBPL7Q9BZF2 842 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 FTOQ9C0B1 505 aaKnown RBP eCLIP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 TUT1Q9H6E5 874 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 SENP2Q9HC62 589 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 NOP53Q9NZM5 478 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 ZFATQ9P243 1243 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 SAR1BQ9Y6B6 198 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 LMTK2Q8IWU2 1503 aa5.31□□□□□ -1.56
SNRNP40-206ENST00000489853 RIMS2Q9UQ26 1411 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 ALKQ9UM73 1620 aa5.3□□□□□ -1.56
SNRNP40-206ENST00000489853 ARHGEF10O15013 1369 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms