RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 SNRNP48Q6IEG0 339 aaKnown RBP9.65□□□□□ -0.86
SF1-218ENST00000489544 SYNE3Q6ZMZ3 975 aa9.65□□□□□ -0.86
SF1-218ENST00000489544 HOMER1Q86YM7 354 aa9.65□□□□□ -0.86
SF1-218ENST00000489544 FBXL16Q8N461 479 aa9.65□□□□□ -0.86
SF1-218ENST00000489544 SRBD1Q8N5C6 995 aaKnown RBP9.65□□□□□ -0.86
SF1-218ENST00000489544 CTCFLQ8NI51 663 aaPredicted RBP9.65□□□□□ -0.86
SF1-218ENST00000489544 TRIM47Q96LD4 638 aa9.65□□□□□ -0.86
SF1-218ENST00000489544 RANBP17Q9H2T7 1088 aaKnown RBP9.65□□□□□ -0.86
SF1-218ENST00000489544 JMJD4Q9H9V9 463 aa9.65□□□□□ -0.86
SF1-218ENST00000489544 PRDM10Q9NQV6 1147 aa9.65□□□□□ -0.86
SF1-218ENST00000489544 TPCN1Q9ULQ1 816 aa9.65□□□□□ -0.86
SF1-218ENST00000489544 PARP14Q460N5 1801 aa9.65□□□□□ -0.86
SF1-218ENST00000489544 PPP1R11O60927 126 aaPredicted RBP9.64□□□□□ -0.87
SF1-218ENST00000489544 CD2BP2O95400 341 aaKnown RBP9.64□□□□□ -0.87
SF1-218ENST00000489544 FMNL1O95466 1100 aaPredicted RBP9.64□□□□□ -0.87
SF1-218ENST00000489544 ERCC3P19447 782 aa9.64□□□□□ -0.87
SF1-218ENST00000489544 STAT3P40763 770 aa9.64□□□□□ -0.87
SF1-218ENST00000489544 METAP2P50579 478 aaKnown RBP eCLIP9.64□□□□□ -0.871e-7■□□□□ 10.8
SF1-218ENST00000489544 EVCP57679 992 aa9.64□□□□□ -0.87
SF1-218ENST00000489544 CDC37Q16543 378 aaPredicted RBP9.64□□□□□ -0.87
SF1-218ENST00000489544 QRICH1Q2TAL8 776 aa9.64□□□□□ -0.87
SF1-218ENST00000489544 TMTC3Q6ZXV5 915 aa9.64□□□□□ -0.87
SF1-218ENST00000489544 NCAPG2Q86XI2 1143 aa9.64□□□□□ -0.87
SF1-218ENST00000489544 MB21D1Q8N884 522 aa9.64□□□□□ -0.87
SF1-218ENST00000489544 NECAB1Q8N987 351 aa9.64□□□□□ -0.87
SF1-218ENST00000489544 GTF3C2Q8WUA4 911 aaPredicted RBP9.64□□□□□ -0.87
SF1-218ENST00000489544 PIGSQ96S52 555 aa9.64□□□□□ -0.87
SF1-218ENST00000489544 HOMER2Q9NSB8 354 aa9.64□□□□□ -0.87
SF1-218ENST00000489544 GABRQQ9UN88 632 aa9.64□□□□□ -0.87
SF1-218ENST00000489544 CTDP1Q9Y5B0 961 aaPredicted RBP9.64□□□□□ -0.87
SF1-218ENST00000489544 CASP8AP2Q9UKL3 1982 aa9.64□□□□□ -0.87
SF1-218ENST00000489544 A0A0G2JMZ2 1700 aa9.64□□□□□ -0.87
SF1-218ENST00000489544 CALM1P0DP23 149 aa9.63□□□□□ -0.87
SF1-218ENST00000489544 CALM2P0DP24 149 aa9.63□□□□□ -0.87
SF1-218ENST00000489544 CALM3P0DP25 149 aa9.63□□□□□ -0.87
SF1-218ENST00000489544 ALAS1P13196 640 aa9.63□□□□□ -0.87
SF1-218ENST00000489544 KIF5BP33176 963 aa9.63□□□□□ -0.87
SF1-218ENST00000489544 FUT2Q10981 343 aa9.63□□□□□ -0.87
SF1-218ENST00000489544 ME3Q16798 604 aa9.63□□□□□ -0.87
SF1-218ENST00000489544 USH1GQ495M9 461 aa9.63□□□□□ -0.87
SF1-218ENST00000489544 NOM1Q5C9Z4 860 aaKnown RBP9.63□□□□□ -0.87
SF1-218ENST00000489544 MUM1L1Q5H9M0 696 aa9.63□□□□□ -0.87
SF1-218ENST00000489544 OTOP1Q7RTM1 612 aa9.63□□□□□ -0.87
SF1-218ENST00000489544 GPR142Q7Z601 462 aa9.63□□□□□ -0.87
SF1-218ENST00000489544 CCAR1Q8IX12 1150 aaKnown RBP9.63□□□□□ -0.87
SF1-218ENST00000489544 MAP3K14Q99558 947 aa9.63□□□□□ -0.87
SF1-218ENST00000489544 TEX13BQ9BXU2 312 aa9.63□□□□□ -0.87
SF1-218ENST00000489544 RIOX1Q9H6W3 641 aa9.63□□□□□ -0.87
SF1-218ENST00000489544 CCPG1Q9ULG6 757 aa9.63□□□□□ -0.87
SF1-218ENST00000489544 TRIM17Q9Y577 477 aa9.63□□□□□ -0.87
SF1-218ENST00000489544 COL11A1P12107 1806 aaPredicted RBP9.63□□□□□ -0.87
SF1-218ENST00000489544 CNTNAP5Q8WYK1 1306 aa9.62□□□□□ -0.87
SF1-218ENST00000489544 TNPO2O14787 897 aaKnown RBP9.62□□□□□ -0.87
SF1-218ENST00000489544 ATP2A1O14983 1001 aa9.62□□□□□ -0.87
SF1-218ENST00000489544 ICAM1P05362 532 aa9.62□□□□□ -0.87
SF1-218ENST00000489544 FCGRTP55899 365 aa9.62□□□□□ -0.87
SF1-218ENST00000489544 CCNA1P78396 465 aa9.62□□□□□ -0.87
SF1-218ENST00000489544 PRKCZQ05513 592 aa9.62□□□□□ -0.87
SF1-218ENST00000489544 ST3GAL1Q11201 340 aa9.62□□□□□ -0.87
SF1-218ENST00000489544 SCRN1Q12765 414 aa9.62□□□□□ -0.87
SF1-218ENST00000489544 KIF22Q14807 665 aa9.62□□□□□ -0.87
SF1-218ENST00000489544 RABEP1Q15276 862 aa9.62□□□□□ -0.87
SF1-218ENST00000489544 RIOX2Q8IUF8 465 aa9.62□□□□□ -0.87
SF1-218ENST00000489544 PHKBQ93100 1093 aa9.62□□□□□ -0.87
SF1-218ENST00000489544 MTMR8Q96EF0 704 aa9.62□□□□□ -0.87
SF1-218ENST00000489544 ZNF274Q96GC6 653 aaPredicted RBP9.62□□□□□ -0.87
SF1-218ENST00000489544 ERO1AQ96HE7 468 aa9.62□□□□□ -0.87
SF1-218ENST00000489544 ALDH8A1Q9H2A2 487 aaPredicted RBP9.62□□□□□ -0.87
SF1-218ENST00000489544 RBM28Q9NW13 759 aaKnown RBP9.62□□□□□ -0.87
SF1-218ENST00000489544 BAZ2BQ9UIF8 2168 aaKnown RBP9.62□□□□□ -0.87
SF1-218ENST00000489544 NFIBO00712 420 aa9.61□□□□□ -0.87
SF1-218ENST00000489544 ZBTB5O15062 677 aa9.61□□□□□ -0.87
SF1-218ENST00000489544 PFKFB2O60825 505 aa9.61□□□□□ -0.87
SF1-218ENST00000489544 CYP2B6P20813 491 aa9.61□□□□□ -0.87
SF1-218ENST00000489544 MAPK4P31152 587 aa9.61□□□□□ -0.87
SF1-218ENST00000489544 GNAQP50148 359 aa9.61□□□□□ -0.87
SF1-218ENST00000489544 ANKRD1Q15327 319 aa9.61□□□□□ -0.87
SF1-218ENST00000489544 NTRK3Q16288 839 aa9.61□□□□□ -0.87
SF1-218ENST00000489544 PLEKHH3Q7Z736 793 aa9.61□□□□□ -0.87
SF1-218ENST00000489544 TBC1D5Q92609 795 aa9.61□□□□□ -0.87
SF1-218ENST00000489544 COA7Q96BR5 231 aa9.61□□□□□ -0.87
SF1-218ENST00000489544 TRERF1Q96PN7 1200 aa9.61□□□□□ -0.87
SF1-218ENST00000489544 PURBQ96QR8 312 aaKnown RBP9.61□□□□□ -0.87
SF1-218ENST00000489544 SPZ1Q9BXG8 430 aa9.61□□□□□ -0.87
SF1-218ENST00000489544 SLKQ9H2G2 1235 aaPredicted RBP9.61□□□□□ -0.87
SF1-218ENST00000489544 CWC22Q9HCG8 908 aaKnown RBP9.61□□□□□ -0.87
SF1-218ENST00000489544 RNF146Q9NTX7 359 aa9.61□□□□□ -0.87
SF1-218ENST00000489544 GJD2Q9UKL4 321 aa9.61□□□□□ -0.87
SF1-218ENST00000489544 V9GY48 417 aaPredicted RBP9.61□□□□□ -0.87
SF1-218ENST00000489544 SMCHD1A6NHR9 2005 aa9.6□□□□□ -0.87
SF1-218ENST00000489544 PNMA6FA0A0J9YX94 578 aa9.6□□□□□ -0.87
SF1-218ENST00000489544 COBLO75128 1261 aa9.6□□□□□ -0.87
SF1-218ENST00000489544 CTDNEP1O95476 244 aa9.6□□□□□ -0.87
SF1-218ENST00000489544 SLC25A27O95847 323 aa9.6□□□□□ -0.87
SF1-218ENST00000489544 PGK2P07205 417 aa9.6□□□□□ -0.87
SF1-218ENST00000489544 FDX1P10109 184 aa9.6□□□□□ -0.87
SF1-218ENST00000489544 PTPREP23469 700 aa9.6□□□□□ -0.87
SF1-218ENST00000489544 FLT3LGP49771 235 aa9.6□□□□□ -0.87
SF1-218ENST00000489544 RCAN1P53805 252 aa9.6□□□□□ -0.87
SF1-218ENST00000489544 OAZ1P54368 228 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms