RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 CCPG1Q9ULG6 757 aa14.35□□□□□ -0.11
SMARCD3-213ENST00000489503 LCTP09848 1927 aa14.35□□□□□ -0.11
SMARCD3-213ENST00000489503 ERICH2A1L162 156 aa14.34□□□□□ -0.11
SMARCD3-213ENST00000489503 SH2B2O14492 632 aaPredicted RBP14.34□□□□□ -0.11
SMARCD3-213ENST00000489503 HOXC6P09630 235 aa14.34□□□□□ -0.11
SMARCD3-213ENST00000489503 PARP1P09874 1014 aaKnown RBP14.34□□□□□ -0.11
SMARCD3-213ENST00000489503 XRCC5P13010 732 aaKnown RBP14.34□□□□□ -0.11
SMARCD3-213ENST00000489503 CYP2C19P33261 490 aa14.34□□□□□ -0.11
SMARCD3-213ENST00000489503 MCM5P33992 734 aa14.34□□□□□ -0.11
SMARCD3-213ENST00000489503 COPB2P35606 906 aa14.34□□□□□ -0.11
SMARCD3-213ENST00000489503 OAZ1P54368 228 aa14.34□□□□□ -0.11
SMARCD3-213ENST00000489503 KCTD2Q14681 263 aa14.34□□□□□ -0.11
SMARCD3-213ENST00000489503 SART3Q15020 963 aaKnown RBP14.34□□□□□ -0.11
SMARCD3-213ENST00000489503 ASPRV1Q53RT3 343 aa14.34□□□□□ -0.11
SMARCD3-213ENST00000489503 MUM1L1Q5H9M0 696 aa14.34□□□□□ -0.11
SMARCD3-213ENST00000489503 GPATCH4Q5T3I0 446 aaKnown RBP14.34□□□□□ -0.11
SMARCD3-213ENST00000489503 IGDCC4Q8TDY8 1250 aa14.34□□□□□ -0.11
SMARCD3-213ENST00000489503 SHISA4Q96DD7 197 aa14.34□□□□□ -0.11
SMARCD3-213ENST00000489503 TMEM106CQ9BVX2 250 aa14.34□□□□□ -0.11
SMARCD3-213ENST00000489503 MYH6P13533 1939 aa14.33□□□□□ -0.11
SMARCD3-213ENST00000489503 STRNO43815 780 aa14.33□□□□□ -0.12
SMARCD3-213ENST00000489503 DHX16O60231 1041 aaKnown RBP14.33□□□□□ -0.12
SMARCD3-213ENST00000489503 REC8O95072 547 aa14.33□□□□□ -0.12
SMARCD3-213ENST00000489503 RXRAP19793 462 aa14.33□□□□□ -0.12
SMARCD3-213ENST00000489503 CCND3P30281 292 aaPredicted RBP14.33□□□□□ -0.12
SMARCD3-213ENST00000489503 HSPA4P34932 840 aa14.33□□□□□ -0.12
SMARCD3-213ENST00000489503 CACNB2Q08289 660 aaPredicted RBP14.33□□□□□ -0.12
SMARCD3-213ENST00000489503 GRM4Q14833 912 aa14.33□□□□□ -0.12
SMARCD3-213ENST00000489503 SLC35G1Q2M3R5 365 aa14.33□□□□□ -0.12
SMARCD3-213ENST00000489503 ABRAQ8N0Z2 381 aa14.33□□□□□ -0.12
SMARCD3-213ENST00000489503 NUP133Q8WUM0 1156 aa14.33□□□□□ -0.12
SMARCD3-213ENST00000489503 NEK1Q96PY6 1258 aa14.33□□□□□ -0.12
SMARCD3-213ENST00000489503 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.33□□□□□ -0.12
SMARCD3-213ENST00000489503 MAD2L2Q9UI95 211 aa14.33□□□□□ -0.12
SMARCD3-213ENST00000489503 SNX14Q9Y5W7 946 aa14.33□□□□□ -0.12
SMARCD3-213ENST00000489503 FRMPD3Q5JV73 1810 aa14.33□□□□□ -0.12
SMARCD3-213ENST00000489503 MCM3APO60318 1980 aa14.33□□□□□ -0.12
SMARCD3-213ENST00000489503 ICAM1P05362 532 aa14.32□□□□□ -0.12
SMARCD3-213ENST00000489503 FDX1P10109 184 aa14.32□□□□□ -0.12
SMARCD3-213ENST00000489503 CDC37Q16543 378 aaPredicted RBP14.32□□□□□ -0.12
SMARCD3-213ENST00000489503 USH1GQ495M9 461 aa14.32□□□□□ -0.12
SMARCD3-213ENST00000489503 MAP3K21Q5TCX8 1036 aa14.32□□□□□ -0.12
SMARCD3-213ENST00000489503 NFXL1Q6ZNB6 911 aa14.32□□□□□ -0.12
SMARCD3-213ENST00000489503 ADGRF4Q8IZF3 695 aa14.32□□□□□ -0.12
SMARCD3-213ENST00000489503 ZNF654Q8IZM8 581 aa14.32□□□□□ -0.12
SMARCD3-213ENST00000489503 CHST13Q8NET6 341 aa14.32□□□□□ -0.12
SMARCD3-213ENST00000489503 MAML3Q96JK9 1138 aa14.32□□□□□ -0.12
SMARCD3-213ENST00000489503 JAKMIP1Q96N16 626 aaKnown RBP14.32□□□□□ -0.12
SMARCD3-213ENST00000489503 DEFB118Q96PH6 123 aa14.32□□□□□ -0.12
SMARCD3-213ENST00000489503 TRERF1Q96PN7 1200 aa14.32□□□□□ -0.12
SMARCD3-213ENST00000489503 ACAD9Q9H845 621 aa14.32□□□□□ -0.12
SMARCD3-213ENST00000489503 VAT1LQ9HCJ6 419 aa14.32□□□□□ -0.12
SMARCD3-213ENST00000489503 BAZ2BQ9UIF8 2168 aaKnown RBP14.32□□□□□ -0.12
SMARCD3-213ENST00000489503 NFIBO00712 420 aa14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 TROAPQ12815 778 aa14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 ZNF792Q3KQV3 632 aa14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 MFSD14CQ5VZR4 134 aa14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 CATIPQ7Z7H3 387 aa14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 CCDC144CPQ8IYA2 1237 aa14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 ANKRD35Q8N283 1001 aa14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 TRPV1Q8NER1 839 aa14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 KCNB2Q92953 911 aa14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 DDX11Q96FC9 970 aa14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 TMEM87BQ96K49 555 aa14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 FGD4Q96M96 766 aa14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 PURBQ96QR8 312 aaKnown RBP14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 JMJD4Q9H9V9 463 aa14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 A1CFQ9NQ94 594 aaKnown RBP14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 PAK6Q9NQU5 681 aaPredicted RBP14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 DDX49Q9Y6V7 483 aaKnown RBP14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 LRRC37A2A6NM11 1700 aa14.31□□□□□ -0.12
SMARCD3-213ENST00000489503 DNAJC25-GNG10A0A024R161 153 aa14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 PALM3A6NDB9 673 aaPredicted RBP14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 CCDC69A6NI79 296 aa14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 KLRF2D3W0D1 207 aa14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 IGHA2P01877 340 aa14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 GJB1P08034 283 aa14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 CNTN2Q02246 1040 aa14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 QRICH1Q2TAL8 776 aa14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 TSGA10IPQ3SY00 556 aa14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 PRAMEF19Q5SWL8 479 aa14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 NSMFQ6X4W1 530 aa14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 HOMER1Q86YM7 354 aa14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 TRMT44Q8IYL2 757 aaKnown RBP14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 U2AF1L4Q8WU68 220 aaKnown RBP14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 PIBF1Q8WXW3 757 aa14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 HMX1Q9NP08 348 aaPredicted RBP14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 FBXO40Q9UH90 709 aa14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 RPTORQ8N122 1335 aa14.3□□□□□ -0.12
SMARCD3-213ENST00000489503 BRCA2P51587 3418 aa14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 DDAH1O94760 285 aa14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 PLEKHA8P1O95397 391 aa14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 CYBAP13498 195 aa14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 EXOSC10Q01780 885 aaKnown RBP14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 KRT32Q14532 448 aa14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 TKFCQ3LXA3 575 aa14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 ANO1Q5XXA6 986 aa14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 OLFML2BQ68BL8 750 aa14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 SLC30A10Q6XR72 485 aa14.29□□□□□ -0.12
SMARCD3-213ENST00000489503 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms