RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 COL11A1P12107 1806 aaPredicted RBP18.4■□□□□ 0.54
UFD1-209ENST00000489406 NKX3-2P78367 333 aa18.4■□□□□ 0.54
UFD1-209ENST00000489406 HERC4Q5GLZ8 1057 aaPredicted RBP18.4■□□□□ 0.54
UFD1-209ENST00000489406 EP400NLQ6ZTU2 488 aa18.4■□□□□ 0.54
UFD1-209ENST00000489406 NOL8Q76FK4 1167 aaKnown RBP18.4■□□□□ 0.54
UFD1-209ENST00000489406 TMCO2Q7Z6W1 182 aaPredicted RBP18.4■□□□□ 0.54
UFD1-209ENST00000489406 TTC6Q86TZ1 520 aa18.4■□□□□ 0.54
UFD1-209ENST00000489406 SUGP1Q8IWZ8 645 aaKnown RBP18.4■□□□□ 0.54
UFD1-209ENST00000489406 FBXO28Q9NVF7 368 aa18.4■□□□□ 0.54
UFD1-209ENST00000489406 ADAMTS5Q9UNA0 930 aa18.4■□□□□ 0.54
UFD1-209ENST00000489406 CACNA1HO95180 2353 aa18.4■□□□□ 0.54
UFD1-209ENST00000489406 ID4P47928 161 aa18.39■□□□□ 0.53
UFD1-209ENST00000489406 PLCD1P51178 756 aa18.39■□□□□ 0.53
UFD1-209ENST00000489406 EDAQ92838 391 aa18.39■□□□□ 0.53
UFD1-209ENST00000489406 ZBED2Q9BTP6 218 aa18.39■□□□□ 0.53
UFD1-209ENST00000489406 SEZ6LQ9BYH1 1024 aa18.39■□□□□ 0.53
UFD1-209ENST00000489406 ZNF214Q9UL59 606 aaPredicted RBP18.39■□□□□ 0.53
UFD1-209ENST00000489406 ASTN1O14525 1302 aa18.39■□□□□ 0.53
UFD1-209ENST00000489406 DCHS1Q96JQ0 3298 aa18.38■□□□□ 0.53
UFD1-209ENST00000489406 TMEM221A6NGB7 291 aa18.38■□□□□ 0.53
UFD1-209ENST00000489406 M0R296 226 aa18.38■□□□□ 0.53
UFD1-209ENST00000489406 DDX10Q13206 875 aaKnown RBP18.38■□□□□ 0.53
UFD1-209ENST00000489406 PKN1Q16512 942 aa18.38■□□□□ 0.53
UFD1-209ENST00000489406 WDR63Q8IWG1 891 aa18.38■□□□□ 0.53
UFD1-209ENST00000489406 TGS1Q96RS0 853 aaKnown RBP18.38■□□□□ 0.53
UFD1-209ENST00000489406 ALDH8A1Q9H2A2 487 aaPredicted RBP18.38■□□□□ 0.53
UFD1-209ENST00000489406 TRMT13Q9NUP7 481 aaKnown RBP18.38■□□□□ 0.53
UFD1-209ENST00000489406 DNAJC25-GNG10A0A024R161 153 aa18.37■□□□□ 0.53
UFD1-209ENST00000489406 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.37■□□□□ 0.53
UFD1-209ENST00000489406 SOWAHBA6NEL2 793 aa18.37■□□□□ 0.53
UFD1-209ENST00000489406 VWA5AO00534 786 aa18.37■□□□□ 0.53
UFD1-209ENST00000489406 UBTFL1P0CB47 393 aaPredicted RBP18.37■□□□□ 0.53
UFD1-209ENST00000489406 COPB2P35606 906 aa18.37■□□□□ 0.53
UFD1-209ENST00000489406 KCNJ6P48051 423 aa18.37■□□□□ 0.53
UFD1-209ENST00000489406 ERVK-21P61565 698 aa18.37■□□□□ 0.53
UFD1-209ENST00000489406 TNFAIP2Q03169 654 aa18.37■□□□□ 0.53
UFD1-209ENST00000489406 FSCN1Q16658 493 aaKnown RBP18.37■□□□□ 0.53
UFD1-209ENST00000489406 ASCL5Q7RTU5 278 aa18.37■□□□□ 0.53
UFD1-209ENST00000489406 ZNF467Q7Z7K2 595 aaPredicted RBP18.37■□□□□ 0.53
UFD1-209ENST00000489406 RNF135Q8IUD6 432 aa18.37■□□□□ 0.53
UFD1-209ENST00000489406 ALG13Q9NP73 1137 aaKnown RBP18.37■□□□□ 0.53
UFD1-209ENST00000489406 RIF1Q5UIP0 2472 aaKnown RBP18.37■□□□□ 0.53
UFD1-209ENST00000489406 WDR46O15213 610 aaKnown RBP18.36■□□□□ 0.53
UFD1-209ENST00000489406 UQCRFS1P1P0C7P4 283 aa18.36■□□□□ 0.53
UFD1-209ENST00000489406 PTGS1P23219 599 aa18.36■□□□□ 0.53
UFD1-209ENST00000489406 RFC2P35250 354 aa18.36■□□□□ 0.53
UFD1-209ENST00000489406 PARP14Q460N5 1801 aa18.36■□□□□ 0.53
UFD1-209ENST00000489406 TRIM67Q6ZTA4 783 aa18.36■□□□□ 0.53
UFD1-209ENST00000489406 ARMCX2Q7L311 632 aa18.36■□□□□ 0.53
UFD1-209ENST00000489406 CLEC10AQ8IUN9 316 aa18.36■□□□□ 0.53
UFD1-209ENST00000489406 MIGA1Q8NAN2 632 aa18.36■□□□□ 0.53
UFD1-209ENST00000489406 SUPT20HL2P0C7V6 817 aa18.35■□□□□ 0.53
UFD1-209ENST00000489406 CYP7A1P22680 504 aa18.35■□□□□ 0.53
UFD1-209ENST00000489406 SLC4A3P48751 1232 aa18.35■□□□□ 0.53
UFD1-209ENST00000489406 SIAH1Q8IUQ4 282 aa18.35■□□□□ 0.53
UFD1-209ENST00000489406 MRPL50Q8N5N7 158 aaKnown RBP18.35■□□□□ 0.53
UFD1-209ENST00000489406 REPS2Q8NFH8 660 aa18.35■□□□□ 0.53
UFD1-209ENST00000489406 KATNBL1Q9H079 304 aa18.35■□□□□ 0.53
UFD1-209ENST00000489406 VCPKMTQ9H867 229 aa18.35■□□□□ 0.53
UFD1-209ENST00000489406 TMX2Q9Y320 296 aa18.35■□□□□ 0.53
UFD1-209ENST00000489406 MCM3APO60318 1980 aa18.35■□□□□ 0.53
UFD1-209ENST00000489406 EPG5Q9HCE0 2579 aa18.35■□□□□ 0.53
UFD1-209ENST00000489406 TNKSO95271 1327 aa18.34■□□□□ 0.53
UFD1-209ENST00000489406 PTPRCP08575 1304 aa18.34■□□□□ 0.53
UFD1-209ENST00000489406 PTPRSQ13332 1948 aa18.34■□□□□ 0.53
UFD1-209ENST00000489406 LINC01553A4QN01 128 aa18.34■□□□□ 0.53
UFD1-209ENST00000489406 ZEB2O60315 1214 aa18.34■□□□□ 0.53
UFD1-209ENST00000489406 TLK2Q86UE8 772 aa18.34■□□□□ 0.53
UFD1-209ENST00000489406 FBXL6Q8N531 539 aa18.34■□□□□ 0.53
UFD1-209ENST00000489406 PABPC5Q96DU9 382 aaKnown RBP18.34■□□□□ 0.53
UFD1-209ENST00000489406 AP5M1Q9H0R1 490 aa18.34■□□□□ 0.53
UFD1-209ENST00000489406 IRF2BPLQ9H1B7 796 aa18.34■□□□□ 0.53
UFD1-209ENST00000489406 PRKRIP1Q9H875 184 aaPredicted RBP18.34■□□□□ 0.53
UFD1-209ENST00000489406 RIPK3Q9Y572 518 aa18.34■□□□□ 0.53
UFD1-209ENST00000489406 MYO15AQ9UKN7 3530 aa18.34■□□□□ 0.53
UFD1-209ENST00000489406 PLXNA3P51805 1871 aa18.33■□□□□ 0.53
UFD1-209ENST00000489406 H0Y858 1186 aa18.33■□□□□ 0.52
UFD1-209ENST00000489406 DYNC1LI2O43237 492 aaPredicted RBP18.33■□□□□ 0.52
UFD1-209ENST00000489406 BAIAP3O94812 1187 aa18.33■□□□□ 0.52
UFD1-209ENST00000489406 CYP2E1P05181 493 aaPredicted RBP18.33■□□□□ 0.52
UFD1-209ENST00000489406 IQCF3P0C7M6 154 aa18.33■□□□□ 0.52
UFD1-209ENST00000489406 EVX2Q03828 476 aa18.33■□□□□ 0.52
UFD1-209ENST00000489406 SNRNP48Q6IEG0 339 aaKnown RBP18.33■□□□□ 0.52
UFD1-209ENST00000489406 CCDC144CPQ8IYA2 1237 aa18.33■□□□□ 0.52
UFD1-209ENST00000489406 MAGEB6Q8N7X4 407 aa18.33■□□□□ 0.52
UFD1-209ENST00000489406 FGD4Q96M96 766 aa18.33■□□□□ 0.52
UFD1-209ENST00000489406 ARHGEF10LQ9HCE6 1279 aa18.33■□□□□ 0.52
UFD1-209ENST00000489406 TLR9Q9NR96 1032 aa18.33■□□□□ 0.52
UFD1-209ENST00000489406 PPP1R9AQ9ULJ8 1098 aa18.33■□□□□ 0.52
UFD1-209ENST00000489406 TRPC6Q9Y210 931 aa18.33■□□□□ 0.52
UFD1-209ENST00000489406 GNEQ9Y223 722 aaKnown RBP18.33■□□□□ 0.52
UFD1-209ENST00000489406 COL4A6Q14031 1691 aa18.33■□□□□ 0.52
UFD1-209ENST00000489406 FAM186AA6NE01 2351 aa18.32■□□□□ 0.52
UFD1-209ENST00000489406 RGS20O76081 388 aa18.32■□□□□ 0.52
UFD1-209ENST00000489406 POLR3DP05423 398 aaPredicted RBP18.32■□□□□ 0.52
UFD1-209ENST00000489406 VCPP55072 806 aaKnown RBP18.32■□□□□ 0.52
UFD1-209ENST00000489406 WDR5P61964 334 aaKnown RBP18.32■□□□□ 0.52
UFD1-209ENST00000489406 GABPAQ06546 454 aa18.32■□□□□ 0.52
UFD1-209ENST00000489406 TMEM179Q6ZVK1 233 aa18.32■□□□□ 0.52
UFD1-209ENST00000489406 RETREG2Q8NC44 543 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms